##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043469_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1732090 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.498666928392865 31.0 31.0 33.0 30.0 34.0 2 30.53845123521295 31.0 31.0 34.0 26.0 34.0 3 31.526940863350056 31.0 31.0 34.0 28.0 34.0 4 35.15753973523316 37.0 35.0 37.0 32.0 37.0 5 35.47069667280569 37.0 35.0 37.0 33.0 37.0 6 35.739176948080065 37.0 35.0 37.0 35.0 37.0 7 33.686430843662855 37.0 35.0 37.0 32.0 37.0 8 34.70584265251806 37.0 35.0 37.0 31.0 37.0 9 36.64350755445733 39.0 37.0 39.0 32.0 39.0 10 36.63580241211484 39.0 35.0 39.0 32.0 39.0 11 36.471006125547746 39.0 35.0 39.0 32.0 39.0 12 36.45714137256147 39.0 35.0 39.0 32.0 39.0 13 36.50438891743501 39.0 35.0 39.0 32.0 39.0 14 37.75379743546814 40.0 36.0 41.0 33.0 41.0 15 37.86267630434908 40.0 36.0 41.0 33.0 41.0 16 37.700584265251806 40.0 36.0 41.0 33.0 41.0 17 37.69443793336374 40.0 36.0 41.0 33.0 41.0 18 37.54280493507843 39.0 36.0 41.0 33.0 41.0 19 37.366714778100445 39.0 35.0 41.0 33.0 41.0 20 37.109295706343204 39.0 35.0 41.0 32.0 41.0 21 37.02195613391914 38.0 35.0 41.0 32.0 41.0 22 36.96474952225346 38.0 35.0 41.0 32.0 41.0 23 36.89482705864014 38.0 35.0 40.0 32.0 41.0 24 36.779583047070304 38.0 35.0 40.0 32.0 41.0 25 36.66057421958443 38.0 35.0 40.0 31.0 41.0 26 36.398940008890996 38.0 35.0 40.0 31.0 41.0 27 36.29398414632034 38.0 35.0 40.0 31.0 41.0 28 36.10097974123747 38.0 35.0 40.0 30.0 41.0 29 36.02092212298437 38.0 35.0 40.0 30.0 41.0 30 35.896075261678085 38.0 35.0 40.0 30.0 41.0 31 35.70325791384974 38.0 35.0 40.0 29.0 41.0 32 35.62007228261811 38.0 35.0 40.0 29.0 41.0 33 35.40123088292179 38.0 34.0 40.0 27.0 41.0 34 35.325933987263944 38.0 34.0 40.0 27.0 41.0 35 35.190537443204455 38.0 34.0 40.0 26.0 41.0 36 35.05879197963154 37.0 34.0 40.0 26.0 41.0 37 34.952027896933764 37.0 34.0 40.0 25.0 41.0 38 34.8573388218857 37.0 34.0 40.0 25.0 41.0 39 34.72346009733905 37.0 34.0 40.0 24.0 41.0 40 34.621080313378634 37.0 34.0 40.0 24.0 41.0 41 34.50792914917816 36.0 34.0 40.0 23.0 41.0 42 34.38722987835505 36.0 34.0 40.0 23.0 41.0 43 34.21538257249912 36.0 33.0 40.0 23.0 41.0 44 33.99214359530971 35.0 33.0 40.0 22.0 41.0 45 33.7799179026494 35.0 33.0 40.0 22.0 41.0 46 33.756857322656444 35.0 33.0 40.0 22.0 41.0 47 33.73870988228094 35.0 33.0 40.0 23.0 41.0 48 33.63657777598162 35.0 33.0 40.0 22.0 41.0 49 33.580222159356616 35.0 33.0 39.0 22.0 41.0 50 33.49638817844338 35.0 33.0 39.0 22.0 41.0 51 33.060773400920276 35.0 33.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 6.0 11 7.0 12 10.0 13 18.0 14 57.0 15 98.0 16 186.0 17 423.0 18 940.0 19 1661.0 20 2941.0 21 4734.0 22 7001.0 23 10580.0 24 16113.0 25 23034.0 26 30505.0 27 35018.0 28 38290.0 29 40771.0 30 45938.0 31 53933.0 32 65677.0 33 87705.0 34 153476.0 35 182083.0 36 170215.0 37 191018.0 38 244824.0 39 324658.0 40 170.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.01859603138405 17.30002482549983 23.54629378381031 28.135085359305812 2 30.920448706475987 20.929397433158787 27.90709489691644 20.24305896344878 3 26.643072819541707 21.786569981929347 31.747484253127723 19.822872945401222 4 24.17212731440052 25.29435537414337 28.729049876161167 21.80446743529493 5 21.851231748927596 34.17282011904693 27.67968177173242 16.296266360293057 6 83.8671200688186 1.9748973783117505 12.722837727831696 1.43514482503796 7 79.26337545970476 7.4726486498969455 11.91802966358561 1.3459462268126945 8 78.91160390049016 3.5917302218706877 14.742536473277948 2.7541294043612052 9 42.48711094689075 19.44748829448816 22.705633079112516 15.35976767950857 10 29.529932047410934 20.105479507415897 29.724494685611024 20.64009375956215 11 26.870024074961464 17.13652292894711 36.97671599050857 19.01673700558285 12 21.22343527183922 21.67139120946371 36.818525596245 20.286647922452065 13 17.284783123278814 25.039576465426162 38.93775727589213 18.737883135402893 14 17.49262451720176 20.534787453307853 41.18885277323926 20.783735256251116 15 21.70891812781091 17.062046429458054 40.32359750359392 20.905437939137112 16 20.4628512375223 18.15194360570178 36.4143318187854 24.970873337990522 17 21.3320901338845 20.509500083713895 35.77620100572141 22.382208776680194 18 23.828669410942847 24.099209625365887 30.98054950955205 21.091571454139217 19 25.616163132400743 21.988580270078344 31.43404788434781 20.9612087131731 20 23.87041089088904 24.129231160043645 34.0479998152521 17.95235813381522 21 22.373260049997402 19.984642830337915 33.71591545473965 23.926181664925032 22 22.007516930413544 21.98713692706499 32.28844921453273 23.71689692798873 23 22.62307385874868 21.08949304019999 37.0185152041753 19.26891789687603 24 25.069828934986056 19.394604206478878 33.403402825488286 22.13216403304678 25 19.910801401774737 22.98633442834957 32.30345998187161 24.799404188004086 26 18.632750030310202 22.83749689681252 33.96261164258208 24.56714143029519 27 20.182034420844182 23.363104688555445 34.98455622975711 21.470304660843258 28 21.942508761092093 23.018145708363885 33.42262815442616 21.61671737611787 29 21.30836157474496 22.71885410111484 35.27149282081185 20.70129150332835 30 25.86580373999042 22.99193459924138 31.13337066780594 20.008890992962257 31 26.84254282398721 22.194805119826334 30.37440317766398 20.588248878522478 32 26.934570374518646 21.89187628818364 28.68095768695622 22.492595650341496 33 20.979048432818157 23.75124849170655 32.523714125709404 22.745988949765888 34 21.746387312437577 23.50888233290418 32.60656201467591 22.138168339982332 35 25.542783573601834 25.652362175175654 28.08433741895629 20.720516832266224 36 22.63127204706453 25.962680923046722 29.744528286636374 21.661518743252373 37 23.26807498455623 28.462781957057658 28.347834119474165 19.92130893891195 38 22.429088557753925 25.9070256164518 27.81194972547616 23.851936100318113 39 22.651998452736287 23.103649348474963 31.89020201028815 22.354150188500597 40 20.386180856652945 23.506457516641746 31.98534718172843 24.122014444976877 41 21.035050141736285 26.860728945955465 27.478075619627155 24.626145292681095 42 20.319152007112795 23.01970451881831 29.88990179494137 26.771241679127527 43 21.345946226812696 21.681032740792915 32.826007886426225 24.147013145968167 44 23.064679087114413 25.041597145644857 30.596562534279396 21.297161232961336 45 23.717012395429798 24.941775542841306 30.414181711112008 20.927030350616885 46 20.849436230218984 26.294707549838638 29.903122816943693 22.95273340299869 47 20.507825805818406 27.110600488427277 31.713305890571508 20.668267815182816 48 23.315820771437973 25.703629719009978 30.27694865740233 20.703600852149716 49 21.456621769076666 24.224838201248204 31.146014352602926 23.17252567707221 50 20.17822399528893 25.1689577331432 32.64224145396602 22.01057681760186 51 20.013798359207662 22.49207604685669 32.992800605049396 24.501324988886257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 863.0 1 6990.5 2 13118.0 3 43950.0 4 74782.0 5 45473.0 6 16164.0 7 14891.0 8 13618.0 9 13992.5 10 14367.0 11 14599.0 12 14831.0 13 14337.0 14 13843.0 15 12894.5 16 11946.0 17 11006.0 18 10066.0 19 9561.5 20 9057.0 21 8983.0 22 8909.0 23 8920.0 24 8931.0 25 9857.0 26 11439.5 27 12096.0 28 14870.5 29 17645.0 30 20795.0 31 23945.0 32 26399.5 33 28854.0 34 32479.0 35 36104.0 36 39692.5 37 43281.0 38 45882.0 39 48483.0 40 55755.0 41 63027.0 42 68830.0 43 74633.0 44 79802.5 45 84972.0 46 87880.5 47 90789.0 48 99117.0 49 107445.0 50 103710.0 51 99975.0 52 90776.0 53 81577.0 54 83991.0 55 86405.0 56 89068.5 57 91732.0 58 93041.0 59 94350.0 60 92936.0 61 91522.0 62 88313.0 63 85104.0 64 79795.5 65 74487.0 66 63076.5 67 51666.0 68 42788.0 69 33910.0 70 29639.0 71 25368.0 72 25522.0 73 25676.0 74 22006.5 75 14094.5 76 9852.0 77 7195.5 78 4539.0 79 3456.0 80 2373.0 81 1846.0 82 1319.0 83 1041.5 84 764.0 85 584.5 86 405.0 87 255.0 88 105.0 89 70.5 90 36.0 91 23.5 92 11.0 93 11.0 94 11.0 95 10.5 96 10.0 97 6.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1732090.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.498533594605377 #Duplication Level Percentage of deduplicated Percentage of total 1 79.2439194897302 20.20603743277089 2 8.629518930792411 4.400801567241866 3 2.7702133530648467 2.119091347420452 4 1.3798794399691425 1.4073960902623373 5 0.8218044636573475 1.0477404362381764 6 0.5640976698355595 0.8630198030964373 7 0.4023760571281421 0.7181999587242748 8 0.3332400260292405 0.6797705599019007 9 0.2733947165543717 0.6274047928184334 >10 3.8233988352024477 24.972417074674496 >50 1.457442965631372 25.722175543141407 >100 0.2921017168110855 10.601405131523906 >500 0.005502325518259128 0.9741785548914276 >1k 0.0023923154427213603 1.2670421267157073 >5k 2.3923154427213603E-4 0.35050907804672154 >10k+ 4.7846308854427206E-4 4.042810502531582 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51594 2.9787135772390583 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 14681 0.8475887511618911 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5746 0.33173795818923957 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4848 0.27989307714957073 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3131 0.1807642789924311 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2220 0.12816885958581828 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2182 0.1259749782055205 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 1966 0.11350449457014358 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 1808 0.10438256672574751 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.037642385788267355 0.0 2 0.0 0.0 0.0 0.12430070031003009 0.0 3 0.0 0.0 0.0 0.18832739638240506 0.0 4 0.0 0.0 0.0 0.23076168097500707 0.0 5 0.0 0.0 0.0 0.492526369876854 0.0 6 0.0 0.0 0.0 0.5551097229358751 0.0 7 0.0 0.0 0.0 0.7498455622975712 0.0 8 0.0 0.0 0.0 0.9606891096882957 0.0 9 0.0 0.0 0.0 1.1310035852640452 0.0 10 0.0 0.0 0.0 1.26996865058975 0.0 11 0.0 0.0 0.0 1.4323736064523207 0.0 12 0.0 0.0 0.0 1.5715118729396278 0.0 13 0.0 0.0 0.0 1.6383675213181763 0.0 14 0.0 0.0 0.0 1.6911361418863915 0.0 15 0.0 0.0 0.0 1.8805604789589456 0.0 16 0.0 0.0 0.0 2.086727594986404 0.0 17 0.0 0.0 0.0 2.344797325774065 0.0 18 0.0 0.0 0.0 2.4893048282710484 0.0 19 0.0 0.0 0.0 2.639585702821447 0.0 20 0.0 0.0 0.0 2.827855365483318 0.0 21 0.0 0.0 0.0 3.0130074072363446 0.0 22 0.0 0.0 0.0 3.1983326501509737 0.0 23 5.773372053415238E-5 0.0 0.0 3.3842929639914785 0.0 24 4.0413604373906666E-4 0.0 0.0 3.527992194400984 0.0 25 6.350709258756762E-4 0.0 0.0 3.6786772049951213 0.0 26 6.350709258756762E-4 0.0 0.0 3.828496209781247 0.0 27 6.350709258756762E-4 0.0 0.0 3.9886495505429855 0.0 28 6.350709258756762E-4 0.0 0.0 4.163986859805206 0.0 29 6.350709258756762E-4 0.0 0.0 4.34867703179396 0.0 30 6.928046464098285E-4 0.0 0.0 4.530769186358676 0.0 31 6.928046464098285E-4 0.0 0.0 4.709224116529741 0.0 32 6.928046464098285E-4 0.0 0.0 4.912215877927821 0.0 33 6.928046464098285E-4 0.0 0.0 5.113013757945604 0.0 34 6.928046464098285E-4 0.0 0.0 5.3385794040725365 0.0 35 6.928046464098285E-4 0.0 0.0 5.530832693451264 0.0 36 6.928046464098285E-4 0.0 0.0 5.748662021026621 0.0 37 6.928046464098285E-4 0.0 0.0 5.986813618229999 0.0 38 6.928046464098285E-4 0.0 0.0 6.2367428944223455 0.0 39 6.928046464098285E-4 0.0 0.0 6.547465778337154 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 20 7.034279E-4 45.0 18 ACCGCAT 25 3.8916274E-5 45.0 18 CGAATCG 25 3.8916274E-5 45.0 35 ATAAGCG 55 1.8189894E-12 45.0 32 CTCGAAT 25 3.8916274E-5 45.0 25 CCGAATA 20 7.034279E-4 45.0 8 AATACGA 20 7.034279E-4 45.0 23 ATCGCAC 25 3.8916274E-5 45.0 38 CGTTTTT 14015 0.0 43.795933 1 CGGTCTA 545 0.0 43.761467 30 TCACGAC 545 0.0 42.935776 24 ATTAGCG 175 0.0 42.42857 10 CACGACG 575 0.0 41.869564 25 GCGTAGG 265 0.0 41.603775 1 CACTTAC 3890 0.0 41.413883 36 GCGCGAC 2490 0.0 41.29518 8 CGCACTT 3895 0.0 41.18742 34 ACGGGCT 790 0.0 41.01266 4 CGACGGT 580 0.0 40.732758 27 ACCCGCA 3950 0.0 40.670887 31 >>END_MODULE