##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043468_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4244303 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57461307545668 31.0 31.0 33.0 30.0 34.0 2 30.605877101611267 31.0 31.0 34.0 26.0 34.0 3 31.598567067431333 31.0 31.0 34.0 28.0 34.0 4 35.204568099874116 37.0 35.0 37.0 33.0 37.0 5 35.52711952940212 37.0 35.0 37.0 33.0 37.0 6 35.78386510105428 37.0 35.0 37.0 35.0 37.0 7 33.67787526008393 37.0 35.0 37.0 32.0 37.0 8 34.720583332528335 37.0 35.0 37.0 31.0 37.0 9 36.80445599666188 39.0 37.0 39.0 32.0 39.0 10 36.73875451399205 39.0 35.0 39.0 32.0 39.0 11 36.45604354825751 38.0 35.0 39.0 33.0 39.0 12 36.42632418090791 39.0 35.0 39.0 32.0 39.0 13 36.415931190586534 39.0 35.0 39.0 32.0 39.0 14 37.532864877931665 40.0 35.0 41.0 33.0 41.0 15 37.66944702110099 40.0 35.0 41.0 33.0 41.0 16 37.47131743421711 40.0 35.0 41.0 32.0 41.0 17 37.39894394910071 39.0 35.0 41.0 32.0 41.0 18 37.30981058609623 39.0 35.0 41.0 32.0 41.0 19 37.1817756649325 38.0 35.0 41.0 32.0 41.0 20 36.90707685101653 38.0 35.0 41.0 32.0 41.0 21 36.86652625884627 38.0 35.0 41.0 32.0 41.0 22 36.83870378717071 38.0 35.0 40.0 32.0 41.0 23 36.78389714400692 38.0 35.0 40.0 32.0 41.0 24 36.689318363933964 38.0 35.0 40.0 32.0 41.0 25 36.5647904968142 38.0 35.0 40.0 31.0 41.0 26 36.30371370752748 38.0 35.0 40.0 31.0 41.0 27 36.16008117233854 38.0 35.0 40.0 31.0 41.0 28 36.031534977592315 37.0 35.0 40.0 30.0 41.0 29 35.88762512949712 37.0 35.0 40.0 30.0 41.0 30 35.72367854038696 37.0 34.0 40.0 30.0 41.0 31 35.60725282808508 37.0 34.0 40.0 29.0 41.0 32 35.51967684682267 37.0 34.0 40.0 29.0 41.0 33 35.10895381408915 37.0 34.0 40.0 26.0 41.0 34 35.09481910221773 37.0 34.0 40.0 26.0 41.0 35 35.03257401745351 37.0 34.0 40.0 26.0 41.0 36 34.95733881393482 37.0 34.0 40.0 26.0 41.0 37 34.849304585464324 37.0 34.0 40.0 26.0 41.0 38 34.747265216456036 36.0 34.0 40.0 25.0 41.0 39 34.619398049573746 36.0 34.0 40.0 24.0 41.0 40 34.52150753610192 36.0 34.0 40.0 24.0 41.0 41 34.42332863605638 36.0 34.0 40.0 24.0 41.0 42 34.304733427373115 35.0 33.0 40.0 23.0 41.0 43 34.13965049149413 35.0 33.0 40.0 23.0 41.0 44 33.91925458667772 35.0 33.0 40.0 23.0 41.0 45 33.68851139986943 35.0 33.0 40.0 23.0 41.0 46 33.70790186280291 35.0 33.0 39.0 23.0 41.0 47 33.66914803207971 35.0 33.0 39.0 23.0 41.0 48 33.58419651000412 35.0 33.0 39.0 23.0 41.0 49 33.526369582944476 35.0 33.0 39.0 23.0 41.0 50 33.47712474816242 35.0 33.0 39.0 23.0 41.0 51 33.03697544685193 35.0 33.0 38.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 5.0 11 13.0 12 19.0 13 40.0 14 79.0 15 197.0 16 469.0 17 984.0 18 1967.0 19 3622.0 20 6529.0 21 10676.0 22 16192.0 23 24389.0 24 37423.0 25 55107.0 26 72776.0 27 86628.0 28 94446.0 29 102679.0 30 116183.0 31 137139.0 32 169098.0 33 229492.0 34 435305.0 35 439147.0 36 416289.0 37 480436.0 38 579254.0 39 727228.0 40 487.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.884058701746792 18.040582870732838 24.737135873664062 27.338222553856312 2 30.41705552124813 21.0387429926657 28.161773558579583 20.382427927506587 3 27.245627845137356 22.07031401857973 31.511864256628236 19.17219387965468 4 24.804755928122944 24.66171712999755 28.40977658758105 22.123750354298455 5 23.432634286477665 33.589119344212705 26.362491085108676 16.615755284200965 6 84.16679958994445 2.1535691490452025 12.350791166417666 1.328840094592681 7 79.5768115518614 7.497084915944974 11.475028997694086 1.4510745344995397 8 79.1223199663172 3.5427960727591787 14.396238911312413 2.938645049611208 9 49.35575994456569 16.861826311646457 19.881049962738288 13.901363781049561 10 32.37212329091491 17.341386795429074 27.03701879908197 23.249471114574053 11 28.689257105348037 14.065466108333924 36.25054573153707 20.994731054780964 12 23.82883597141863 16.65305233862898 36.98918291177609 22.5289287781763 13 19.1807936426782 20.215427597888276 41.44932630870134 19.154452450732194 14 20.336908085968414 17.298317297327735 42.219817953619234 20.14495666308461 15 26.450326472921464 15.340469330299932 38.05416342801162 20.15504076876698 16 25.58179752953547 15.725031883915921 34.114317474506414 24.57885311204219 17 25.436944534827038 19.018505511976876 35.13488551594926 20.40966443724682 18 27.097594116159947 22.769415849905155 30.024364424500323 20.108625609434576 19 28.101410290452872 20.49983236352353 29.30568340667478 22.093073939348816 20 27.335300990527774 22.437912656094532 33.23530388853011 16.991482464847586 21 24.922749389004508 17.993508003552055 33.564851519790174 23.518891087653262 22 26.837739906882234 19.08772771406754 32.127206752204074 21.94732562684615 23 27.173554762701908 18.58441774774327 32.703367313785094 21.53866017576973 24 29.190658631110928 16.016104411018723 30.634806233202482 24.158430724667866 25 21.34213791993644 18.729859767316327 32.69582779551789 27.23217451722933 26 20.07052748119067 19.915778868756544 33.867704544185464 26.145989105867322 27 20.892664826238843 22.378468266756638 33.079047372442545 23.649819534561978 28 25.7073776306734 22.92890022225086 30.390973500242563 20.97274864683318 29 23.679412143760707 19.087916202024218 35.61604814736366 21.616623506851422 30 29.10023153389379 19.6675873517984 30.336288431810832 20.895892682496985 31 31.71241544253556 19.449224053984835 29.373963168982044 19.46439733449756 32 31.029452892500842 19.062423205883274 28.277198871051386 21.630925030564498 33 23.496578825781288 21.204070491668478 33.87986201739131 21.41948866515892 34 23.64628538537423 24.320106269509974 31.25490804968448 20.77870029543131 35 28.0083679228368 26.53005687859703 26.47770434862921 18.983870849936963 36 26.88250579659369 24.71411678195454 26.94414135842799 21.459236063023777 37 25.581467675611286 29.087720645769167 24.995694228239596 20.335117450379954 38 25.091281183270848 23.525393922158717 26.21144154882439 25.17188334574605 39 23.830626607007087 20.63601491222469 31.203474398505477 24.329884082262744 40 21.19565921660164 22.736972360361644 30.99041232447354 25.07695609856318 41 21.97790779781745 25.246359649629163 26.53262502700679 26.2431075255466 42 20.447032174658595 20.35601605257683 29.062486820568655 30.134464952195923 43 22.0763220721989 19.402337674760734 32.29095566456966 26.230384588470713 44 26.129779141592863 21.595324367746603 29.362865940532522 22.91203055012802 45 24.710535510777625 23.693430935538768 29.220086313347565 22.375947240336046 46 22.619426558377196 23.67217891842312 29.237191595416256 24.47120292778343 47 22.47306566001532 24.052312005057132 31.59600056829119 21.878621766636357 48 25.335585136122468 23.195587119958212 30.036262726765738 21.432565017153582 49 22.151999986805844 22.352127074810635 31.915770386798492 23.580102551585032 50 21.746044050106697 22.40824936391205 33.40392992677479 22.441776659206468 51 21.645132310299243 19.94553640491737 31.951583098567653 26.457748186215735 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1983.0 1 16533.5 2 31084.0 3 102234.0 4 173384.0 5 106322.0 6 39260.0 7 34832.5 8 30405.0 9 29805.5 10 29206.0 11 28613.5 12 28021.0 13 26676.0 14 25331.0 15 23929.5 16 22528.0 17 21209.0 18 19890.0 19 19435.0 20 18980.0 21 17838.5 22 16697.0 23 17023.5 24 17350.0 25 17875.5 26 20194.0 27 21987.0 28 23463.5 29 24940.0 30 29188.0 31 33436.0 32 38519.5 33 43603.0 34 51874.0 35 60145.0 36 64973.0 37 69801.0 38 73625.0 39 77449.0 40 89373.0 41 101297.0 42 118235.0 43 135173.0 44 153247.0 45 171321.0 46 187052.5 47 202784.0 48 225343.0 49 247902.0 50 238828.5 51 229755.0 52 217675.5 53 205596.0 54 213148.0 55 220700.0 56 244313.5 57 267927.0 58 280832.5 59 293738.0 60 298566.5 61 303395.0 62 299710.0 63 296025.0 64 273120.5 65 250216.0 66 214967.0 67 179718.0 68 145989.0 69 112260.0 70 93722.0 71 75184.0 72 67765.5 73 60347.0 74 50362.5 75 31083.0 76 21788.0 77 17318.0 78 12848.0 79 9836.0 80 6824.0 81 4880.0 82 2936.0 83 2112.5 84 1289.0 85 863.0 86 437.0 87 351.5 88 266.0 89 189.5 90 113.0 91 105.0 92 97.0 93 92.0 94 87.0 95 53.5 96 20.0 97 10.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4244303.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.93030552971423 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22938832784875 16.936640819026692 2 9.826323814749445 4.309885669827247 3 3.0780714782981144 2.025091438841304 4 1.4859587400173335 1.3035011669251726 5 0.8494758967846405 0.9314632978307579 6 0.551758994176617 0.7260145992636614 7 0.4243211439386112 0.6513844630504115 8 0.327042566594379 0.5737714725309315 9 0.2603842400100483 0.5139275344688519 >10 3.7771214607196084 20.893373239948446 >50 1.5578372600425672 24.442398193835537 >100 0.6206004033507309 19.375967873372215 >500 0.007655786623427782 1.092326846009948 >1k 0.003247909476605606 1.3048904958762135 >5k 2.3199353404325753E-4 0.31309638613623747 >10k+ 5.799838351081438E-4 4.606266503056484 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 106252 2.5034027966429355 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 36712 0.8649712332036615 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 15708 0.37009610294081263 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12310 0.29003584334106214 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 10093 0.23780111834616896 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6708 0.15804715167602312 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5600 0.13194156967586904 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4949 0.11660336220104928 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 4421 0.10416315706018162 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0360718827095992 0.0 2 0.0 0.0 0.0 0.1207029752588352 0.0 3 0.0 0.0 0.0 0.18917122552277724 0.0 4 0.0 0.0 0.0 0.23674087358984502 0.0 5 0.0 0.0 0.0 0.5226064208893663 0.0 6 0.0 0.0 0.0 0.6156723495000239 0.0 7 0.0 0.0 0.0 0.8798853427759517 0.0 8 0.0 0.0 0.0 1.1873563221098964 0.0 9 0.0 0.0 0.0 1.4393882811853913 0.0 10 0.0 0.0 0.0 1.6223394041377348 0.0 11 0.0 0.0 0.0 1.8048664291875485 0.0 12 0.0 0.0 0.0 1.953442061040411 0.0 13 0.0 0.0 0.0 2.033997101526446 0.0 14 0.0 0.0 0.0 2.0891298288552913 0.0 15 0.0 0.0 0.0 2.2582035259970836 0.0 16 0.0 0.0 0.0 2.443039528516225 0.0 17 0.0 0.0 0.0 2.7006790043029443 4.712198916995323E-5 18 0.0 0.0 0.0 2.8508096617984156 4.712198916995323E-5 19 0.0 0.0 0.0 3.018728870205544 4.712198916995323E-5 20 0.0 0.0 0.0 3.2295055277627447 4.712198916995323E-5 21 0.0 0.0 0.0 3.4369129630942936 4.712198916995323E-5 22 4.712198916995323E-5 0.0 0.0 3.629853947750667 4.712198916995323E-5 23 7.068298375492984E-5 0.0 0.0 3.816362780885342 4.712198916995323E-5 24 9.424397833990646E-5 0.0 0.0 3.96941500170935 4.712198916995323E-5 25 9.424397833990646E-5 0.0 0.0 4.135991233425135 4.712198916995323E-5 26 9.424397833990646E-5 0.0 0.0 4.3004469756282715 4.712198916995323E-5 27 9.424397833990646E-5 0.0 0.0 4.475952824291762 4.712198916995323E-5 28 9.424397833990646E-5 0.0 0.0 4.655393359050945 4.712198916995323E-5 29 9.424397833990646E-5 0.0 0.0 4.840300044553841 4.712198916995323E-5 30 9.424397833990646E-5 0.0 0.0 5.046034649269856 4.712198916995323E-5 31 9.424397833990646E-5 0.0 0.0 5.244960126550814 4.712198916995323E-5 32 9.424397833990646E-5 0.0 0.0 5.478025484985403 4.712198916995323E-5 33 9.424397833990646E-5 0.0 0.0 5.697189856614855 4.712198916995323E-5 34 9.424397833990646E-5 0.0 0.0 5.946182447388888 4.712198916995323E-5 35 9.424397833990646E-5 0.0 0.0 6.173239752204307 4.712198916995323E-5 36 9.424397833990646E-5 0.0 0.0 6.432222204682371 4.712198916995323E-5 37 9.424397833990646E-5 0.0 0.0 6.779487703870341 4.712198916995323E-5 38 9.424397833990646E-5 0.0 0.0 7.203797655351185 4.712198916995323E-5 39 9.424397833990646E-5 0.0 0.0 7.650961771579456 4.712198916995323E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTATA 30 2.1668893E-6 45.000004 15 CGTTTTT 33395 0.0 43.996105 1 ACGGGAT 550 0.0 41.727272 4 CCTACGG 65 0.0 41.538464 1 CGTTTTA 1790 0.0 40.977654 1 ACGTAGG 430 0.0 40.813953 1 CGCACTT 11545 0.0 40.790386 34 AACACGT 690 0.0 40.76087 40 CTTACTG 11530 0.0 40.745884 38 GCACTTA 11555 0.0 40.696667 35 AAACACG 710 0.0 40.56338 39 CACTTAC 11635 0.0 40.513535 36 CCGCACT 11625 0.0 40.509678 33 TAGTAGG 900 0.0 40.5 1 ACCCGCA 11625 0.0 40.490322 31 TAGCATA 4240 0.0 40.489388 29 ACTTACT 11645 0.0 40.40146 37 TATACGG 340 0.0 40.36765 1 TCACGAC 970 0.0 40.360825 24 CCCGCAC 11765 0.0 40.25712 32 >>END_MODULE