##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043465_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1168204 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52974052477136 31.0 31.0 33.0 30.0 34.0 2 30.581918911423006 31.0 31.0 34.0 26.0 34.0 3 31.47330089607637 31.0 31.0 34.0 28.0 34.0 4 35.090824034158416 37.0 35.0 37.0 32.0 37.0 5 35.39363415978716 37.0 35.0 37.0 33.0 37.0 6 35.83305227511633 37.0 35.0 37.0 35.0 37.0 7 33.82663901167947 37.0 35.0 37.0 32.0 37.0 8 34.81584723216151 37.0 35.0 37.0 32.0 37.0 9 36.77009922924421 39.0 37.0 39.0 32.0 39.0 10 36.74896507801719 39.0 35.0 39.0 32.0 39.0 11 36.51408914881305 39.0 35.0 39.0 32.0 39.0 12 36.43645887190936 39.0 35.0 39.0 32.0 39.0 13 36.47615912974104 39.0 35.0 39.0 32.0 39.0 14 37.835424292332505 40.0 36.0 41.0 33.0 41.0 15 37.99078927995453 40.0 36.0 41.0 33.0 41.0 16 37.94677898723168 40.0 36.0 41.0 33.0 41.0 17 37.90324207073422 40.0 36.0 41.0 33.0 41.0 18 37.594347391380275 39.0 36.0 41.0 33.0 41.0 19 37.265499005310716 38.0 35.0 41.0 33.0 41.0 20 36.92715484624261 38.0 35.0 41.0 33.0 41.0 21 36.83944413818134 38.0 35.0 41.0 32.0 41.0 22 36.7591533670489 38.0 35.0 40.0 32.0 41.0 23 36.65604808749157 38.0 35.0 40.0 32.0 41.0 24 36.48940339187334 37.0 35.0 40.0 32.0 41.0 25 36.39568602744041 37.0 35.0 40.0 32.0 41.0 26 36.103059054754134 37.0 35.0 40.0 31.0 41.0 27 36.02263988139058 36.0 35.0 40.0 31.0 41.0 28 35.94746123108635 36.0 35.0 40.0 31.0 41.0 29 35.868524675484764 36.0 35.0 40.0 31.0 41.0 30 35.699726246443255 36.0 35.0 40.0 30.0 41.0 31 35.18761021191504 36.0 34.0 40.0 28.0 41.0 32 34.98800380755416 36.0 34.0 40.0 26.0 41.0 33 34.7933306169128 36.0 34.0 40.0 24.0 41.0 34 34.53816627917727 36.0 34.0 40.0 23.0 41.0 35 34.28430907615451 36.0 34.0 40.0 21.0 41.0 36 34.105697292596155 36.0 34.0 40.0 21.0 41.0 37 33.99867745701949 36.0 33.0 40.0 20.0 41.0 38 33.90681850087827 36.0 33.0 40.0 20.0 41.0 39 33.78235393818203 36.0 33.0 40.0 18.0 41.0 40 33.71489226196795 36.0 33.0 40.0 18.0 41.0 41 33.6304018818631 35.0 33.0 40.0 18.0 41.0 42 33.55294109590448 35.0 33.0 40.0 18.0 41.0 43 33.387427195934954 35.0 33.0 40.0 18.0 41.0 44 33.20690393116271 35.0 33.0 40.0 17.0 41.0 45 33.04871238242636 35.0 33.0 40.0 15.0 41.0 46 33.04503408651229 35.0 33.0 40.0 16.0 41.0 47 33.018488209251124 35.0 33.0 40.0 16.0 41.0 48 32.95608900500255 35.0 33.0 40.0 15.0 41.0 49 32.86333551331788 35.0 33.0 40.0 15.0 41.0 50 32.743166433259944 35.0 33.0 40.0 15.0 41.0 51 32.30628469000278 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 5.0 12 11.0 13 12.0 14 20.0 15 50.0 16 148.0 17 321.0 18 702.0 19 1318.0 20 2222.0 21 3645.0 22 5669.0 23 8945.0 24 14490.0 25 21921.0 26 27580.0 27 29875.0 28 29572.0 29 29664.0 30 31720.0 31 36611.0 32 45035.0 33 57685.0 34 95724.0 35 136692.0 36 125645.0 37 101966.0 38 137201.0 39 223637.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.370486661576233 18.6045416725161 25.01960274061722 32.00536892529045 2 33.150203217931114 20.15803746605901 28.740100187980865 17.95165912802901 3 20.594177044420324 20.741754008717656 40.55207823291138 18.111990713950647 4 21.810231774587315 24.429979695327187 37.33371911070327 16.42606941938223 5 18.972628068385315 30.23821181916857 35.10020510116384 15.688955011282276 6 75.60229206542692 2.1040845605733245 20.729684198992643 1.563939175007105 7 72.24243368452771 7.370630472075083 18.58725017205899 1.7996856713382252 8 70.62345275311503 4.5428709369254 21.966026481676145 2.867649828283416 9 37.90057216034185 22.047262293229608 28.48440854508288 11.567757001345655 10 28.190281834337156 23.907896223604784 37.370270945827954 10.53155099623011 11 27.000335557830653 21.03879117003537 39.39175007104924 12.569123201084743 12 18.61977873727534 28.93989405959918 37.275766903725724 15.164560299399762 13 13.383706955292055 30.992532126238224 37.78021646904136 17.843544449428354 14 13.184341091110799 24.228045786523587 45.6284176393849 16.959195482980714 15 15.057472838648046 21.614033165440283 45.66274383583689 17.66575016007478 16 16.162160033692746 23.739432496379056 38.275078667766934 21.823328802161264 17 17.441474263056794 23.95326501193285 41.714204026009156 16.891056699001204 18 20.435643089734327 25.956168614385845 37.63623476721531 15.971953528664514 19 21.116602922092376 25.191148121389755 37.609355900168126 16.082893056349747 20 16.04325956767825 28.39324296098969 38.38559018801511 17.177907283316955 21 16.47580388356828 26.27871501895217 37.07451780682141 20.17096329065814 22 14.275931258581547 28.615635625284625 37.239471873063266 19.868961243070558 23 13.399885636412817 25.598097592543766 45.77582340070741 15.226193370336002 24 14.775587140602156 26.288559190004484 42.03897606924818 16.89687760014518 25 15.093083057411205 29.40239889608322 38.37514680655091 17.129371239954665 26 14.047546490167814 30.520867930601163 37.75231038414523 17.67927519508579 27 14.209846910299914 28.25131569486151 41.94721127474311 15.591626120095462 28 13.387815826687804 25.331277756282294 42.30887755905647 18.972028857973434 29 14.339105156291195 30.015904756361046 39.90227734197109 15.742712745376664 30 19.50438450818521 28.515310682038407 37.025382553047244 14.954922256729134 31 18.997538101222048 27.945718384802653 37.235363001667515 15.821380512307782 32 18.191600097243292 29.377831269196136 36.485921979380315 15.944646654180264 33 16.3323357906667 28.207230928844616 37.0250401470976 18.435393133391088 34 16.014839873857646 27.648338817535294 38.86298968330873 17.473831625298324 35 20.771800130799072 28.42414509794522 35.49756720572776 15.306487565527938 36 17.37787235791009 30.88373263573828 36.249833077099545 15.488561929252082 37 17.563028375181048 29.934326538857942 36.66260344939754 15.840041636563477 38 16.84782794785842 31.753614950813386 35.218506356766454 16.18005074456174 39 20.067727896839934 28.45949851224615 34.58676737966999 16.886006211243927 40 16.21446254250114 27.9012056113487 36.43019541107546 19.454136435074695 41 17.02134216284142 28.572321272654435 34.11356235725952 20.292774207244623 42 17.580919086050038 27.944006355054423 35.50261769348504 18.972456865410496 43 17.21985201214856 28.680692755717324 36.28321765719001 17.8162375749441 44 14.606866608914196 33.250271356715096 34.507842808276635 17.635019226094073 45 17.445583134452544 31.01059404008204 34.411284330476526 17.13253849498889 46 17.06885098835477 29.690790307172378 34.43807759603631 18.802281108436542 47 16.239714981287516 27.941609513406906 37.299735320200924 18.518940185104658 48 17.437964602072924 27.49776580117856 36.49996062331579 18.564308973432723 49 17.345514995668566 29.28743609848965 35.72826321430161 17.638785691540175 50 16.04283156024119 29.089439858106974 35.62862308295469 19.239105498697146 51 16.024684044909964 27.54929789660025 36.90879332719285 19.51722473129693 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1037.0 1 7711.0 2 14385.0 3 53552.0 4 92719.0 5 55505.5 6 18292.0 7 17926.5 8 17561.0 9 19698.5 10 21836.0 11 23423.0 12 25010.0 13 24221.5 14 23433.0 15 20597.5 16 17762.0 17 15402.0 18 13042.0 19 11663.5 20 10285.0 21 9505.0 22 8725.0 23 8180.5 24 7636.0 25 8494.0 26 10296.5 27 11241.0 28 12240.5 29 13240.0 30 15692.0 31 18144.0 32 20767.5 33 23391.0 34 29293.0 35 35195.0 36 38638.0 37 42081.0 38 45092.5 39 48104.0 40 52352.0 41 56600.0 42 64866.5 43 73133.0 44 78841.0 45 84549.0 46 86810.5 47 89072.0 48 89369.0 49 89666.0 50 84670.0 51 79674.0 52 69507.0 53 59340.0 54 52358.5 55 45377.0 56 40051.0 57 34725.0 58 32220.5 59 29716.0 60 24369.5 61 19023.0 62 15698.5 63 12374.0 64 10219.5 65 8065.0 66 6460.0 67 4855.0 68 4080.0 69 3305.0 70 2804.5 71 2304.0 72 2016.5 73 1729.0 74 1431.0 75 827.0 76 521.0 77 394.0 78 267.0 79 226.5 80 186.0 81 124.0 82 62.0 83 49.0 84 36.0 85 23.0 86 10.0 87 8.0 88 6.0 89 3.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1168204.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.81395524997065 #Duplication Level Percentage of deduplicated Percentage of total 1 79.29257678084856 26.811956429224747 2 9.248715925741381 6.254713328654198 3 3.3520530560246335 3.4003851609583293 4 1.7126008883036308 2.3163923919263576 5 1.0297414736030717 1.7409816053726546 6 0.6827091249719496 1.385105748032887 7 0.4834553938042754 1.1443277336018292 8 0.3936802675812874 1.0649509560632098 9 0.2782416570894856 0.846760584735139 >10 2.627441572903342 19.87645654279458 >50 0.6820435341014518 16.222290907627592 >100 0.2107414953336865 10.262062380719856 >500 0.003912280234733351 0.8428615763703214 >1k 0.0015649120938933407 0.7888873915070131 >5k 2.6081868231555677E-4 0.6869361534318754 >10k+ 2.6081868231555677E-4 6.354931108979413 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 72057 6.168186378406512 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7789 0.6667499854477472 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3052 0.261255739579731 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 0.11864366155226312 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1209 0.1034921982804373 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1010097551455054 0.0 2 0.0 0.0 0.0 0.3162118944978788 0.0 3 0.0 0.0 0.0 0.5162625705784264 0.0 4 0.0 0.0 0.0 0.6463768314438232 0.0 5 0.0 0.0 0.0 1.4162766092223618 0.0 6 0.0 0.0 0.0 1.6126464213442173 0.0 7 0.0 0.0 0.0 2.233770814001664 0.0 8 0.0 0.0 0.0 2.9708852221016193 0.0 9 0.0 0.0 0.0 3.5309757542347056 0.0 10 0.0 0.0 0.0 3.929193873672749 0.0 11 0.0 0.0 0.0 4.363364617823599 0.0 12 0.0 0.0 0.0 4.715871542983931 0.0 13 0.0 0.0 0.0 4.8734638813084015 0.0 14 0.0 0.0 0.0 4.993477166659248 0.0 15 0.0 0.0 0.0 5.4311575717939675 0.0 16 0.0 0.0 0.0 5.94365367692629 0.0 17 0.0 0.0 0.0 6.573937428736762 0.0 18 0.0 0.0 0.0 6.895199810991916 0.0 19 0.0 0.0 0.0 7.260118951826907 0.0 20 0.0 0.0 0.0 7.681877480303098 0.0 21 0.0 0.0 0.0 8.112795367932312 0.0 22 8.560148741144527E-5 0.0 0.0 8.533355475584743 0.0 23 8.560148741144527E-5 0.0 0.0 8.887232024543659 0.0 24 4.280074370572263E-4 0.0 0.0 9.204385535403063 0.0 25 4.280074370572263E-4 0.0 0.0 9.507072394889933 0.0 26 5.992104118801168E-4 0.0 0.0 9.851703983208413 0.0 27 6.848118992915621E-4 0.0 0.0 10.161238961688198 0.0 28 6.848118992915621E-4 0.0 0.0 10.505528144057031 0.0 29 7.704133867030074E-4 0.0 0.0 10.907683931916 0.0 30 7.704133867030074E-4 0.0 0.0 11.277311154558621 0.0 31 7.704133867030074E-4 0.0 0.0 11.607818497454211 0.0 32 7.704133867030074E-4 0.0 0.0 11.947570800990238 0.0 33 7.704133867030074E-4 0.0 0.0 12.311034716539234 0.0 34 7.704133867030074E-4 0.0 0.0 12.73544689112518 0.0 35 7.704133867030074E-4 0.0 0.0 13.094630732303605 0.0 36 7.704133867030074E-4 0.0 0.0 13.437464689386443 0.0 37 7.704133867030074E-4 0.0 0.0 13.814282436971626 0.0 38 7.704133867030074E-4 0.0 0.0 14.186306501261766 0.0 39 7.704133867030074E-4 0.0 0.0 14.599333678021988 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCAC 45 3.8562575E-10 45.000004 44 ACACGAT 40 6.8157533E-9 45.0 20 CGTTGAC 20 7.0333347E-4 45.0 38 CGGCACG 35 1.2119563E-7 45.0 28 GTGATCG 20 7.0333347E-4 45.0 34 TCGATCC 25 3.8908456E-5 45.0 20 TTATCGG 25 3.8908456E-5 45.0 1 AGAACGC 25 3.8908456E-5 45.0 7 CCATGCG 25 3.8908456E-5 45.0 33 ATGTACG 35 1.2119563E-7 45.0 28 ACTAGTC 25 3.8908456E-5 45.0 17 GTTCGCA 50 2.1827873E-11 45.0 17 ACAATCG 20 7.0333347E-4 45.0 22 ACGTGAC 20 7.0333347E-4 45.0 38 TTGCGAC 35 1.2119563E-7 45.0 23 TTACGCG 20 7.0333347E-4 45.0 1 ACATCGC 20 7.0333347E-4 45.0 17 CACGTTG 20 7.0333347E-4 45.0 36 CCAACCG 35 1.2119563E-7 45.0 31 GTGACGG 80 0.0 45.0 1 >>END_MODULE