##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043463_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2426475 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.536197982670334 31.0 31.0 33.0 30.0 34.0 2 30.575347366035093 31.0 31.0 34.0 26.0 34.0 3 31.524399798060973 31.0 31.0 34.0 28.0 34.0 4 35.155079281674034 37.0 35.0 37.0 32.0 37.0 5 35.48284404331386 37.0 35.0 37.0 33.0 37.0 6 35.780935719510815 37.0 35.0 37.0 35.0 37.0 7 33.77029847824519 37.0 35.0 37.0 32.0 37.0 8 34.77703664781215 37.0 35.0 37.0 32.0 37.0 9 36.799312995188494 39.0 37.0 39.0 32.0 39.0 10 36.80517623301291 39.0 35.0 39.0 32.0 39.0 11 36.66132970667326 39.0 35.0 39.0 33.0 39.0 12 36.68264828609403 39.0 35.0 39.0 33.0 39.0 13 36.684591846196646 39.0 35.0 39.0 33.0 39.0 14 37.95322226686861 40.0 36.0 41.0 33.0 41.0 15 38.03966247334096 40.0 36.0 41.0 33.0 41.0 16 37.9156813896702 40.0 36.0 41.0 33.0 41.0 17 37.851844342101195 40.0 36.0 41.0 33.0 41.0 18 37.60710660526072 39.0 36.0 41.0 33.0 41.0 19 37.33538404475628 38.0 36.0 41.0 33.0 41.0 20 37.00286382509608 38.0 35.0 41.0 32.0 41.0 21 36.93052967782483 38.0 35.0 41.0 32.0 41.0 22 36.841030301157026 38.0 35.0 40.0 32.0 41.0 23 36.76577751676815 38.0 35.0 40.0 32.0 41.0 24 36.61937872840231 38.0 35.0 40.0 32.0 41.0 25 36.520217599604365 38.0 35.0 40.0 32.0 41.0 26 36.25810239132898 38.0 35.0 40.0 31.0 41.0 27 36.14762031341761 37.0 35.0 40.0 31.0 41.0 28 35.97039573867441 37.0 35.0 40.0 31.0 41.0 29 35.85867482665183 37.0 35.0 40.0 30.0 41.0 30 35.65698018730875 37.0 35.0 40.0 30.0 41.0 31 35.32899494122132 37.0 34.0 40.0 28.0 41.0 32 35.149205328717585 37.0 34.0 40.0 26.0 41.0 33 34.805355505414234 37.0 34.0 40.0 24.0 41.0 34 34.611274379501126 37.0 34.0 40.0 23.0 41.0 35 34.406923211654764 37.0 34.0 40.0 22.0 41.0 36 34.257320598811035 37.0 34.0 40.0 21.0 41.0 37 34.122065959880075 36.0 34.0 40.0 21.0 41.0 38 34.00787603416479 36.0 33.0 40.0 20.0 41.0 39 33.883363727217464 36.0 33.0 40.0 20.0 41.0 40 33.77398489578504 36.0 33.0 40.0 20.0 41.0 41 33.66453064630792 35.0 33.0 40.0 18.0 41.0 42 33.54460606435261 35.0 33.0 40.0 18.0 41.0 43 33.36297015217548 35.0 33.0 40.0 18.0 41.0 44 33.14664276367982 35.0 33.0 40.0 18.0 41.0 45 32.931232755334385 35.0 33.0 40.0 18.0 41.0 46 32.91907314107914 35.0 33.0 40.0 18.0 41.0 47 32.8919828145767 35.0 33.0 39.0 18.0 41.0 48 32.779855551777786 35.0 32.0 39.0 18.0 41.0 49 32.725170051205964 35.0 32.0 39.0 18.0 41.0 50 32.640953646750944 35.0 32.0 39.0 17.0 41.0 51 32.239554909900164 35.0 31.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 6.0 12 14.0 13 34.0 14 60.0 15 119.0 16 300.0 17 640.0 18 1451.0 19 2545.0 20 4595.0 21 7259.0 22 11402.0 23 17508.0 24 27148.0 25 41759.0 26 55433.0 27 62262.0 28 64626.0 29 65366.0 30 69147.0 31 78001.0 32 92562.0 33 119967.0 34 204628.0 35 238663.0 36 255016.0 37 255819.0 38 320851.0 39 429044.0 40 249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.91625712195675 16.786737963506734 23.21161355464202 32.0853913598945 2 34.39066959272195 19.368466602787997 26.107954955233414 20.132908849256637 3 24.604910415314396 20.151371845990585 36.67323998804851 18.570477750646514 4 22.5150475483984 23.06943199497213 33.487672446656156 20.927848009973317 5 20.380758095591343 31.584829845763917 32.24657167289999 15.787840385744753 6 77.52760691950257 2.1854748142882165 18.762773158594257 1.524145107614956 7 73.5509329376977 7.24734439876776 17.553776568891085 1.6479460946434643 8 72.33052061117465 3.949515243305618 20.55174687561174 3.168217269907994 9 40.05217445059191 19.304175810589435 26.794259161953036 13.849390576865616 10 26.65001699996909 19.163519096631944 34.78131857942077 19.4051453239782 11 24.13154885172936 16.36497388186567 41.45907128653705 18.044405979867914 12 21.019462388856265 18.315828516675424 41.17244150465181 19.492267589816503 13 17.328676372103565 21.223132321577598 42.545626886738994 18.902564419579843 14 17.294758858014198 19.573661381221733 43.379717491422745 19.751862269341327 15 21.323813350642393 16.905675929074068 41.93779041613864 19.832720304144903 16 21.359379346583008 17.72377625980074 39.05142233074728 21.865422062868976 17 21.793218557784442 19.97078065918668 38.15992334559392 20.07607743743496 18 22.76425679226038 23.828310615192823 35.223070503508175 18.184362089038625 19 23.79163189400262 21.43722890200806 35.13673126654921 19.634407937440113 20 23.07272895867462 23.208440227078377 36.83145303372176 16.88737778052525 21 21.01830845156039 20.029342976952165 37.42779134340968 21.524557228077768 22 21.620910992283044 21.396264128004617 36.73856108140409 20.244263798308246 23 21.192388135051875 21.10266951029786 38.77781555548687 18.927126799163396 24 23.410131981578218 19.482830031218125 36.291657651531544 20.815380335672117 25 19.142707013259976 21.450375544771738 36.819872448716765 22.587044993251524 26 17.851080270763145 21.43924829227583 38.02004966051577 22.689621776445254 27 19.618664935760723 22.32151577906222 37.78650099424062 20.27331829093644 28 20.98195942674044 22.782142820346387 35.86140388835657 20.37449386455661 29 20.78232827455465 21.383529605703746 38.911672281807974 18.92246983793363 30 24.686304206719626 21.3753284084938 35.3547017793301 18.583665605456474 31 24.630090975592164 22.282941303743083 33.88685232693516 19.200115393729586 32 25.056553230509277 21.72047929609825 32.8811547615368 20.341812711855674 33 21.31598306184898 23.417344089677414 35.68192542680225 19.584747421671356 34 21.976406103504054 24.520178448160397 33.83822211232343 19.665193336012116 35 24.37667810300951 26.73404836233631 30.69333086061056 18.19594267404362 36 23.03221751718027 25.831422124687048 30.719995054554445 20.416365303578235 37 22.19029662370311 28.463140976107315 30.624094622858262 18.722467777331314 38 21.87032629637643 25.91928620735841 30.154771839808774 22.055615656456382 39 22.044199919636508 23.861445100402847 33.575248045003555 20.519106934957087 40 19.61742857437229 24.388093839829384 34.060767162241525 21.933710423556807 41 19.966989150928814 27.111262221947474 30.552179602097695 22.369569025026014 42 19.93031042973861 23.04058356257534 32.0504435446481 24.978662463037946 43 20.863268733450788 22.99994848494215 34.44836645751553 21.68841632409153 44 22.17529543885678 24.895702613874036 32.47698822365778 20.45201372361141 45 22.901616542515377 25.245881371124778 31.931217094756796 19.921284991603045 46 20.772272535262058 25.327934555270502 32.62329098795578 21.27650192151166 47 20.47385610814041 26.65323153957902 33.126902193511164 19.74601015876941 48 21.90135896722612 25.867152968812785 32.3544235980177 19.877064465943395 49 20.250115908880165 23.981207306895804 34.66209212952946 21.10658465469457 50 19.576340164230004 24.434004059386556 35.29885945661917 20.690796319764267 51 19.22838685747844 22.62430068308967 34.464068247148646 23.68324421228325 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1099.0 1 12607.0 2 24115.0 3 97277.0 4 170439.0 5 103212.0 6 35985.0 7 32960.5 8 29936.0 9 30577.5 10 31219.0 11 31638.5 12 32058.0 13 30740.0 14 29422.0 15 27058.0 16 24694.0 17 22749.0 18 20804.0 19 18939.5 20 17075.0 21 16236.0 22 15397.0 23 14805.0 24 14213.0 25 14970.0 26 16890.5 27 18054.0 28 20224.0 29 22394.0 30 24963.5 31 27533.0 32 31276.5 33 35020.0 34 40303.5 35 45587.0 36 49829.5 37 54072.0 38 55898.5 39 57725.0 40 62730.0 41 67735.0 42 75252.0 43 82769.0 44 89305.5 45 95842.0 46 100569.0 47 105296.0 48 120862.0 49 136428.0 50 140368.0 51 144308.0 52 139071.5 53 133835.0 54 131174.0 55 128513.0 56 128267.5 57 128022.0 58 126995.5 59 125969.0 60 123778.5 61 121588.0 62 117993.0 63 114398.0 64 106896.0 65 99394.0 66 84446.0 67 69498.0 68 57763.0 69 46028.0 70 39449.5 71 32871.0 72 30891.5 73 28912.0 74 24593.5 75 16076.0 76 11877.0 77 8533.0 78 5189.0 79 4131.0 80 3073.0 81 2052.0 82 1031.0 83 795.0 84 559.0 85 439.5 86 320.0 87 206.5 88 93.0 89 59.0 90 25.0 91 31.0 92 37.0 93 27.5 94 18.0 95 10.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2426475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.75961266621876 #Duplication Level Percentage of deduplicated Percentage of total 1 76.87110773849243 22.87654391520706 2 8.803381235827711 5.2397043146258175 3 3.098285174650321 2.7661130018124447 4 1.6116962030753863 1.9185381895655578 5 1.1015937975490668 1.6391502365284614 6 0.7818292612570249 1.3960161591675009 7 0.6215187695012157 1.2947310491598751 8 0.5417104107476365 1.2896873600886343 9 0.4252032855869927 1.1388496575125253 >10 5.5334538217754625 37.424565911508026 >50 0.5202494625105368 10.019438295159635 >100 0.08324177659588522 4.137716787002255 >500 0.004095951044555619 0.8437671040233505 >1k 0.0020479755222778096 1.3635140576367435 >5k 1.462839658769864E-4 0.27700392544116087 >10k+ 4.3885189763095923E-4 6.374660035560997 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 118178 4.870357205411142 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 16475 0.6789684624815834 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11778 0.4853954810991253 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6363 0.2622322504868173 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5000 0.2060602314056399 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4832 0.19913660763041038 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3344 0.13781308276409196 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3142 0.1294882494153041 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2823 0.11634160665162427 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.045621735233208664 0.0 2 0.0 0.0 0.0 0.147168217269908 0.0 3 0.0 0.0 0.0 0.24859106316776394 0.0 4 0.0 0.0 0.0 0.3170854840869986 0.0 5 0.0 0.0 0.0 0.6866339030898732 0.0 6 0.0 0.0 0.0 0.8589414685912692 0.0 7 0.0 0.0 0.0 1.2722158686984206 0.0 8 0.0 0.0 0.0 1.6982660031527215 0.0 9 0.0 0.0 0.0 2.1016907241986833 0.0 10 0.0 0.0 0.0 2.3310357617531605 0.0 11 0.0 0.0 0.0 2.5682935121936143 0.0 12 0.0 0.0 0.0 2.759764679215735 0.0 13 0.0 0.0 0.0 2.8591269227995344 0.0 14 0.0 0.0 0.0 2.931206791745227 0.0 15 0.0 0.0 0.0 3.132692486013662 0.0 16 0.0 0.0 0.0 3.3576278346160584 0.0 17 0.0 0.0 0.0 3.6668830299096427 0.0 18 0.0 0.0 0.0 3.824477894888676 0.0 19 0.0 0.0 0.0 4.015372093262861 0.0 20 0.0 0.0 0.0 4.225883225666863 0.0 21 0.0 0.0 0.0 4.446532521456022 0.0 22 0.0 0.0 0.0 4.666357576319558 0.0 23 0.0 0.0 0.0 4.865988728505342 0.0 24 1.236361388433839E-4 0.0 0.0 5.035699935091027 0.0 25 1.236361388433839E-4 0.0 0.0 5.208872953564327 0.0 26 1.236361388433839E-4 0.0 0.0 5.3968823086988325 0.0 27 1.236361388433839E-4 0.0 0.0 5.589795897340792 0.0 28 1.648481851245119E-4 0.0 0.0 5.798617335847268 0.0 29 1.648481851245119E-4 0.0 0.0 6.006490897289278 0.0 30 1.648481851245119E-4 0.0 0.0 6.214158398499881 0.0 31 1.648481851245119E-4 0.0 0.0 6.430974973984895 0.0 32 1.648481851245119E-4 0.0 0.0 6.661432736788964 0.0 33 1.648481851245119E-4 0.0 0.0 6.884595967401271 0.0 34 1.648481851245119E-4 0.0 0.0 7.142624589167414 0.0 35 1.648481851245119E-4 0.0 0.0 7.377533252969843 0.0 36 1.648481851245119E-4 0.0 0.0 7.635685510874828 0.0 37 1.648481851245119E-4 0.0 0.0 7.941684954512204 0.0 38 1.648481851245119E-4 0.0 0.0 8.304021265415882 0.0 39 1.648481851245119E-4 0.0 0.0 8.67225089893776 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 32385 0.0 44.152386 1 CGTTTTA 1480 0.0 43.63176 1 ACTACGG 120 0.0 43.125004 1 TACGGGT 295 0.0 40.42373 3 CACTTAC 5415 0.0 40.096954 36 ATAACGC 45 1.9297659E-8 40.0 10 CGCACTT 5490 0.0 39.67213 34 CTTACTG 5445 0.0 39.586777 38 ACTTACT 5440 0.0 39.581802 37 GCACTTA 5480 0.0 39.58029 35 CCGCACT 5545 0.0 39.197475 33 ACCCGCA 5555 0.0 39.086407 31 TTGTAGG 605 0.0 39.049587 1 CGGTCTA 365 0.0 38.835617 30 CCCGCAC 5655 0.0 38.75332 32 GCGCGAC 2160 0.0 38.750004 8 AACACGT 680 0.0 38.713234 40 TCAACGC 5860 0.0 38.70307 15 CAACGCA 5820 0.0 38.698452 16 CGCAAGC 5835 0.0 38.637535 19 >>END_MODULE