##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043462_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2542242 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46384923229181 31.0 31.0 33.0 30.0 34.0 2 30.49143747920143 31.0 31.0 34.0 26.0 34.0 3 31.467772147576824 31.0 31.0 34.0 28.0 34.0 4 35.09726100032963 37.0 35.0 37.0 32.0 37.0 5 35.41867139320332 37.0 35.0 37.0 33.0 37.0 6 35.72175032904027 37.0 35.0 37.0 35.0 37.0 7 33.69667718494148 37.0 35.0 37.0 32.0 37.0 8 34.68760173107045 37.0 35.0 37.0 31.0 37.0 9 36.649036559068726 39.0 37.0 39.0 32.0 39.0 10 36.702802880292275 39.0 35.0 39.0 32.0 39.0 11 36.62429422533339 39.0 35.0 39.0 32.0 39.0 12 36.63146506115468 39.0 35.0 39.0 32.0 39.0 13 36.66532179076579 39.0 35.0 39.0 33.0 39.0 14 37.799480143904475 40.0 36.0 41.0 33.0 41.0 15 37.93817229044284 40.0 36.0 41.0 33.0 41.0 16 37.83218120068821 40.0 36.0 41.0 33.0 41.0 17 37.71907001772451 40.0 36.0 41.0 32.0 41.0 18 37.576017546716635 39.0 36.0 41.0 33.0 41.0 19 37.36570908670378 39.0 36.0 41.0 32.0 41.0 20 36.98316604005441 39.0 35.0 41.0 32.0 41.0 21 36.95773140401268 38.0 35.0 41.0 32.0 41.0 22 36.918870036762826 38.0 35.0 40.0 32.0 41.0 23 36.8559169426042 38.0 35.0 40.0 32.0 41.0 24 36.752362678297345 38.0 35.0 40.0 32.0 41.0 25 36.64477063945919 38.0 35.0 40.0 31.0 41.0 26 36.36362431271295 38.0 35.0 40.0 31.0 41.0 27 36.234459583312685 38.0 35.0 40.0 31.0 41.0 28 36.05421159747971 38.0 35.0 40.0 30.0 41.0 29 36.01133802368146 38.0 35.0 40.0 30.0 41.0 30 35.872867335210415 38.0 35.0 40.0 30.0 41.0 31 35.6484339413793 38.0 35.0 40.0 29.0 41.0 32 35.51286659570568 38.0 35.0 40.0 28.0 41.0 33 35.12931341705471 37.0 34.0 40.0 25.0 41.0 34 35.06708606025705 37.0 34.0 40.0 25.0 41.0 35 34.952813304162234 37.0 34.0 40.0 25.0 41.0 36 34.830444937972075 37.0 34.0 40.0 24.0 41.0 37 34.68318240356347 37.0 34.0 40.0 24.0 41.0 38 34.560580385344906 37.0 34.0 40.0 23.0 41.0 39 34.43497589922596 37.0 34.0 40.0 23.0 41.0 40 34.33135476480996 36.0 34.0 40.0 23.0 41.0 41 34.218472906985255 36.0 33.0 40.0 23.0 41.0 42 34.09827506586706 36.0 33.0 40.0 23.0 41.0 43 33.91470520902416 36.0 33.0 40.0 22.0 41.0 44 33.677562560920634 35.0 33.0 40.0 21.0 41.0 45 33.42280121247308 35.0 33.0 40.0 20.0 41.0 46 33.43016597161088 35.0 33.0 40.0 20.0 41.0 47 33.39575815362975 35.0 33.0 39.0 20.0 41.0 48 33.29495697105153 35.0 33.0 39.0 20.0 41.0 49 33.21309812362474 35.0 33.0 39.0 20.0 41.0 50 33.14590074430365 35.0 33.0 39.0 20.0 41.0 51 32.701378940321185 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 10.0 12 15.0 13 38.0 14 57.0 15 128.0 16 265.0 17 672.0 18 1378.0 19 2619.0 20 4580.0 21 7151.0 22 10978.0 23 16385.0 24 24956.0 25 36576.0 26 47965.0 27 55895.0 28 60158.0 29 63452.0 30 70147.0 31 81384.0 32 98398.0 33 128156.0 34 210025.0 35 253178.0 36 275311.0 37 295707.0 38 351507.0 39 444952.0 40 191.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.843955846846992 16.864798866512317 23.216200503335244 29.075044783305444 2 32.44525894859734 20.723833529616773 26.519465888770622 20.311441633015267 3 27.035781802047172 21.293606194846912 32.754749547840056 18.915862455265863 4 23.696917917334385 24.21150307484496 29.932830942136903 22.158748065683756 5 21.90837850999236 33.09857991489402 28.356073103976726 16.636968471136896 6 81.06667264564113 2.389544347076321 15.053680963496 1.4901020437865473 7 76.07143615753338 7.799100164343127 14.339154179657168 1.7903094984663144 8 74.28152001265025 4.339988089253501 17.742292039860878 3.6361998582353685 9 41.38382577268411 18.07101762932089 24.97869990347103 15.566456694523968 10 26.44524006762535 18.172424183063608 31.12374825055994 24.2585874987511 11 23.308166571081745 15.353259052442686 40.03245953768367 21.3061148387919 12 21.889261525850017 17.970869807044334 39.874921427621764 20.264947239483888 13 19.399530021138823 21.59928126433282 40.918724495937056 18.08246421859131 14 17.009592320479324 19.091652171587125 43.576181968514405 20.322573539419142 15 21.421092091154186 17.387369101761358 40.22323602552393 20.968302781560528 16 22.696777096751607 16.851936204342465 35.877308297164475 24.573978401741456 17 21.114944997368465 19.410347244676156 38.133505779544194 21.34120197841118 18 25.487620769383874 21.137366151609484 33.5086903607131 19.86632271829354 19 26.09110383669218 19.583934180931635 32.65121888474818 21.673743097627998 20 24.953879292372637 20.675805057111006 36.57149870075311 17.798816949763243 21 24.329233802289473 17.901639576405394 34.043493892398914 23.725632728906216 22 24.073396631791937 20.02814838241206 33.61281105417974 22.285643931616267 23 22.45828681927212 19.765742207075487 35.55137551814501 22.22459545550738 24 26.539920275095763 18.03573381291002 33.50105930119949 21.923286610794722 25 20.682295391233406 20.68681895743993 32.94210385950669 25.688781791819977 26 19.922336268537773 21.87569082723045 35.208528535048984 22.993444369182793 27 21.157623861143037 20.73878096577745 35.45972413326505 22.643871039814464 28 23.19543143414356 22.3107792255812 33.246166179301575 21.24762316097366 29 21.773064877379888 19.998686199032193 36.00628893708782 22.221959986500107 30 25.405685218008355 20.766551728749665 31.752877971491305 22.074885081750676 31 27.079601391212954 21.527061546461745 31.269407082409934 20.123929979915367 32 27.25318832746843 19.96658854664505 30.928251519721567 21.851971606164952 33 21.967066864602188 22.309048469815227 34.51614755794295 21.207737107639634 34 22.482674741429022 23.97175406589931 31.999392662067578 21.546178530604088 35 27.924288875724656 23.695580515151587 29.19096608426735 19.189164524856405 36 24.991129876699386 23.339359510227588 29.776118874599668 21.893391738473365 37 23.098037086949237 28.1855149903117 28.44135216080924 20.275095761929823 38 22.194228558886213 23.50999629460925 30.54571516008311 23.750059986421434 39 22.433033519232236 21.630238191328758 35.19035559950626 20.746372689932745 40 20.842429634944274 21.61328465189388 34.932551661092845 22.611734052069004 41 23.420980378736562 25.509963252908257 28.87207433438673 22.196982033968442 42 20.91657678537291 21.43206665612479 30.67465646464813 26.976700093854166 43 21.73632565271127 21.116400405626216 35.1790270163108 21.968246925351718 44 25.24326952351507 23.15700078906729 31.16194288348631 20.43778680393133 45 24.083151800654697 24.56969084768484 30.900008732449546 20.447148619210918 46 22.151785707261542 25.595871675473852 30.402023096148987 21.850319521115612 47 22.867295875058314 25.502607540902872 31.5190292662933 20.11106731774552 48 24.115996824849876 24.772543290528596 30.952403429728566 20.159056454892966 49 21.16427153669871 24.600097079664327 32.84112999470546 21.394501388931502 50 22.3559755522881 23.17855656542532 33.56136040550034 20.904107476786237 51 22.251343499163337 21.682042858233007 32.75762102899724 23.308992613606417 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1087.0 1 11569.5 2 22052.0 3 78128.0 4 134204.0 5 80459.5 6 26715.0 7 24468.5 8 22222.0 9 22213.0 10 22204.0 11 21963.5 12 21723.0 13 21329.0 14 20935.0 15 19606.0 16 18277.0 17 17992.0 18 17707.0 19 16783.0 20 15859.0 21 15459.0 22 15059.0 23 14591.0 24 14123.0 25 14439.5 26 16600.5 27 18445.0 28 20246.0 29 22047.0 30 25615.0 31 29183.0 32 31288.0 33 33393.0 34 36301.0 35 39209.0 36 42356.0 37 45503.0 38 49277.5 39 53052.0 40 61331.5 41 69611.0 42 80249.5 43 90888.0 44 102594.5 45 114301.0 46 125949.5 47 137598.0 48 150632.5 49 163667.0 50 153044.0 51 142421.0 52 130857.0 53 119293.0 54 122779.5 55 126266.0 56 132525.0 57 138784.0 58 141415.5 59 144047.0 60 140138.5 61 136230.0 62 137362.5 63 138495.0 64 130048.0 65 121601.0 66 107421.5 67 93242.0 68 77431.0 69 61620.0 70 52929.0 71 44238.0 72 41313.0 73 38388.0 74 32032.0 75 19929.0 76 14182.0 77 10759.5 78 7337.0 79 5473.0 80 3609.0 81 2681.0 82 1753.0 83 1316.5 84 880.0 85 532.0 86 184.0 87 147.0 88 110.0 89 70.5 90 31.0 91 26.5 92 22.0 93 15.0 94 8.0 95 5.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2542242.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.71532312183248 #Duplication Level Percentage of deduplicated Percentage of total 1 77.73564371274475 20.76732839869621 2 9.136343553164883 4.881607403497418 3 3.0172579738084737 2.418210651366568 4 1.521811590760421 1.626227535108582 5 0.8931635207732478 1.1930576029045423 6 0.6199091048799074 0.9936643225819598 7 0.4644930667901389 0.8686357657004633 8 0.3892081281170746 0.8318256723432976 9 0.3229655469768784 0.7765316050236006 >10 4.621814158493744 30.828675329514137 >50 1.0785536335695143 19.213615962878595 >100 0.19151807336898535 7.63977582301486 >500 0.004203920997979773 0.7789676527828896 >1k 0.002179810887841364 1.1111946321590278 >5k 4.671023331088638E-4 0.8206052146153066 >10k+ 4.671023331088638E-4 5.250076427812527 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 95573 3.759398200486028 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 20073 0.7895786475087738 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10570 0.41577473741681553 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8101 0.3186557377307117 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6583 0.258944663804626 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 5044 0.1984075473538711 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3997 0.15722342719536533 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3760 0.147900947274099 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3319 0.13055405425604644 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05526617843619923 0.0 2 0.0 0.0 0.0 0.17909388641993956 0.0 3 0.0 0.0 0.0 0.27904503190490915 0.0 4 0.0 0.0 0.0 0.3482752625438491 0.0 5 0.0 0.0 0.0 0.745483710834767 0.0 6 0.0 0.0 0.0 0.8682886995022504 0.0 7 0.0 0.0 0.0 1.2334781661226586 0.0 8 0.0 0.0 0.0 1.6118843131377736 0.0 9 0.0 0.0 0.0 1.945644828462436 0.0 10 0.0 0.0 0.0 2.184174441300238 0.0 11 0.0 0.0 0.0 2.4391068985564712 0.0 12 0.0 0.0 0.0 2.649511730197204 0.0 13 0.0 0.0 0.0 2.7487548392324572 0.0 14 0.0 0.0 0.0 2.8291563116335894 0.0 15 0.0 0.0 0.0 3.088966353321202 0.0 16 0.0 0.0 0.0 3.364195855469306 0.0 17 0.0 0.0 0.0 3.7356396440622097 0.0 18 0.0 0.0 0.0 3.9253934125862133 0.0 19 0.0 0.0 0.0 4.160225501742163 0.0 20 0.0 0.0 0.0 4.427666602943386 0.0 21 0.0 0.0 0.0 4.695540393086103 0.0 22 0.0 0.0 0.0 4.943825174786665 0.0 23 0.0 0.0 0.0 5.178303245717756 0.0 24 1.9667679158789762E-4 0.0 0.0 5.372383903656694 0.0 25 1.9667679158789762E-4 0.0 0.0 5.577793144791094 0.0 26 1.9667679158789762E-4 0.0 0.0 5.784854470974833 0.0 27 1.9667679158789762E-4 0.0 0.0 5.989870358526057 0.0 28 3.9335358317579524E-4 0.0 0.0 6.203618695623784 0.0 29 3.9335358317579524E-4 0.0 0.0 6.4322751335238735 0.0 30 3.9335358317579524E-4 0.0 0.0 6.666005832646931 0.0 31 3.9335358317579524E-4 0.0 0.0 6.905676170875943 0.0 32 3.9335358317579524E-4 0.0 0.0 7.175477393576221 0.0 33 3.9335358317579524E-4 0.0 0.0 7.418491237262228 0.0 34 3.9335358317579524E-4 0.0 0.0 7.7163385704429395 0.0 35 3.9335358317579524E-4 0.0 0.0 7.964151327843691 0.0 36 3.9335358317579524E-4 0.0 0.0 8.259520533450395 0.0 37 3.9335358317579524E-4 0.0 0.0 8.568657114468254 0.0 38 3.9335358317579524E-4 0.0 0.0 8.957801814304068 0.0 39 3.9335358317579524E-4 0.0 0.0 9.320709830142055 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGG 35 1.212702E-7 45.000004 1 CCGTACC 25 3.8921455E-5 45.0 38 CGCATCG 65 0.0 44.999996 20 CGTTTTT 24880 0.0 43.453575 1 TACGCGG 295 0.0 41.949154 1 CGTTTTA 1260 0.0 41.607143 1 CGCACTT 6570 0.0 41.23288 34 TCACGAC 505 0.0 40.990097 24 CACTTAC 6630 0.0 40.9276 36 ACTTACT 6615 0.0 40.782314 37 GCACTTA 6640 0.0 40.764305 35 ACCCGCA 6645 0.0 40.733635 31 CTTACGG 260 0.0 40.673077 1 CTTACTG 6630 0.0 40.588234 38 CCGCACT 6660 0.0 40.54054 33 CCCGCAC 6725 0.0 40.349445 32 GTTGATC 2155 0.0 40.301624 15 AACGCAA 7175 0.0 39.951218 17 CGGTCTA 525 0.0 39.85714 30 TCAACGC 7160 0.0 39.846367 15 >>END_MODULE