##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043460_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1231088 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50882796355744 31.0 31.0 33.0 30.0 34.0 2 30.545504464343736 31.0 31.0 34.0 26.0 34.0 3 31.45444842285848 31.0 31.0 34.0 28.0 34.0 4 35.085854951067674 37.0 35.0 37.0 32.0 37.0 5 35.4016406625684 37.0 35.0 37.0 33.0 37.0 6 35.80799829094265 37.0 35.0 37.0 35.0 37.0 7 33.73822098826404 37.0 35.0 37.0 32.0 37.0 8 34.76508746734596 37.0 35.0 37.0 31.0 37.0 9 36.722965376967366 39.0 37.0 39.0 32.0 39.0 10 36.69983624241321 39.0 35.0 39.0 32.0 39.0 11 36.551267659176276 39.0 35.0 39.0 32.0 39.0 12 36.536199686781124 39.0 35.0 39.0 32.0 39.0 13 36.60940810080189 39.0 35.0 39.0 32.0 39.0 14 37.95652138596104 40.0 36.0 41.0 33.0 41.0 15 38.08459671445096 40.0 36.0 41.0 33.0 41.0 16 38.047404409757874 40.0 36.0 41.0 33.0 41.0 17 38.006452828717364 40.0 36.0 41.0 33.0 41.0 18 37.70216751361397 39.0 36.0 41.0 33.0 41.0 19 37.38764085101958 38.0 36.0 41.0 33.0 41.0 20 37.07272672627789 38.0 35.0 41.0 33.0 41.0 21 36.98260969158988 38.0 35.0 41.0 33.0 41.0 22 36.86054124481759 38.0 35.0 41.0 32.0 41.0 23 36.743881834604835 38.0 35.0 40.0 32.0 41.0 24 36.56378747904293 38.0 35.0 40.0 32.0 41.0 25 36.4375048737377 37.0 35.0 40.0 32.0 41.0 26 36.16158389976996 37.0 35.0 40.0 31.0 41.0 27 36.07160414202721 37.0 35.0 40.0 31.0 41.0 28 35.93628156557452 36.0 35.0 40.0 31.0 41.0 29 35.844558634313714 36.0 35.0 40.0 31.0 41.0 30 35.70010186111797 36.0 35.0 40.0 30.0 41.0 31 35.21832151722704 36.0 35.0 40.0 28.0 41.0 32 35.04894207400283 36.0 34.0 40.0 26.0 41.0 33 34.88153649454791 36.0 34.0 40.0 25.0 41.0 34 34.68900842181875 36.0 34.0 40.0 24.0 41.0 35 34.44338909972317 36.0 34.0 40.0 23.0 41.0 36 34.29480508298351 36.0 34.0 40.0 22.0 41.0 37 34.20605188256241 36.0 34.0 40.0 21.0 41.0 38 34.10910999051246 36.0 34.0 40.0 21.0 41.0 39 33.99764679697958 35.0 33.0 40.0 21.0 41.0 40 33.91727804998505 35.0 33.0 40.0 21.0 41.0 41 33.83676552772832 35.0 33.0 40.0 20.0 41.0 42 33.749341233120624 35.0 33.0 40.0 20.0 41.0 43 33.58977749762811 35.0 33.0 40.0 18.0 41.0 44 33.408964265755166 35.0 33.0 40.0 18.0 41.0 45 33.21932956864172 35.0 33.0 40.0 18.0 41.0 46 33.24141409874842 35.0 33.0 40.0 18.0 41.0 47 33.22928336560831 35.0 33.0 40.0 18.0 41.0 48 33.15875631961322 35.0 33.0 40.0 18.0 41.0 49 33.065855568407784 35.0 33.0 40.0 18.0 41.0 50 32.96395870969419 35.0 33.0 40.0 18.0 41.0 51 32.58758837711033 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 5.0 12 11.0 13 12.0 14 30.0 15 65.0 16 177.0 17 359.0 18 768.0 19 1373.0 20 2385.0 21 3843.0 22 5838.0 23 9214.0 24 14829.0 25 22229.0 26 27052.0 27 28868.0 28 28393.0 29 29303.0 30 32133.0 31 37357.0 32 46074.0 33 59839.0 34 98040.0 35 141532.0 36 151394.0 37 114495.0 38 143846.0 39 231491.0 40 129.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.088864484098615 18.24987328281975 24.97213846613727 31.68912376694436 2 32.7165076745123 20.226742523686365 28.216260738468733 18.840489063332598 3 20.86179054624852 20.84465123533005 39.575156284522315 18.71840193389912 4 21.848397515043604 25.02631818359045 36.405927114877244 16.719357186488697 5 19.619799721872035 30.723311412344202 33.82024680607722 15.836642059706534 6 76.68282039951653 2.085147446811276 19.68713853112044 1.544893622551759 7 72.83630414722587 7.711227792001872 17.810424600028593 1.6420434607436676 8 72.03465552421923 4.5097507245623385 20.764234563248117 2.691359187970316 9 36.399916171711524 24.8571182563716 27.095138609100246 11.64782696281663 10 25.71213430721443 25.752180185331998 36.352640916002755 12.183044591450814 11 25.18585186436713 22.56841103154283 39.34828379449723 12.897453309592816 12 18.57015907879859 29.89997465656395 36.507057172192404 15.022809092445058 13 14.210032101685663 31.46281987965117 36.6725205671731 17.654627451490065 14 13.501309410862586 26.29649545767646 42.836499096733945 17.365696034727005 15 15.223688314726486 24.838029450372353 41.32677761459782 18.61150462030334 16 16.387536877948612 26.14995841077161 36.55750035740743 20.905004353872346 17 17.090492312491065 26.076608658357486 40.20086297648909 16.63203605266236 18 19.702572033843236 29.390669066711723 34.97004275892544 15.936716140519605 19 20.825968574139296 28.05477756261128 36.01253525336938 15.10671860988004 20 16.217930805921267 30.151053377175312 36.35239722911766 17.27861858778576 21 17.119572280779277 28.2417666324422 34.641390379891604 19.997270706886916 22 14.217667624085362 30.500337912480667 35.78298220760823 19.49901225582574 23 13.510163367687769 27.917094472531613 44.23956695215939 14.333175207621226 24 14.934919355886825 30.114175428564 39.30758808468607 15.643317130863107 25 15.391344891673056 32.49515875388275 35.86551083269433 16.247985521749868 26 13.762622980648013 31.856780343890932 36.30187281494093 18.078723860520125 27 14.32310281637056 30.049029801281467 38.709824155543714 16.918043226804258 28 13.561824987328283 28.08296401232081 38.52047944582353 19.834731554527377 29 13.676357823323759 32.7245493417205 37.88518773637628 15.713905098579467 30 17.056457377539218 32.94443614103947 35.12583990746397 14.873266573957345 31 16.5541374783931 30.532342123390045 34.879391237669445 18.03412916054742 32 15.737136581625357 33.516612947246664 33.5439058783775 17.202344592750478 33 14.144642787518032 31.624140597585225 33.937541426770466 20.293675188126276 34 15.117522061785998 32.19388053494145 34.71839543558218 17.970201967690368 35 17.69776003015219 33.05287680490753 32.73502787777966 16.514335287160627 36 15.308897495548655 34.47373380294504 33.842665999506124 16.37470270200018 37 14.889024992526936 33.12825728136413 35.61126418257671 16.371453543532226 38 15.40685962335755 34.6943516629193 33.19917016492728 16.69961854879586 39 17.71595531757275 31.105412448175922 33.705470283196654 17.473161951054678 40 14.643957215081294 31.559401115111186 34.75421740769141 19.04242426211611 41 15.06764747930286 32.494752609074254 32.37664569876402 20.06095421285887 42 15.117359603862598 31.255604798357222 34.3110321926621 19.316003405118074 43 15.247569629465968 31.64785945440131 34.122662230482305 18.981908685650417 44 13.814284600288525 36.66634716608399 31.688555164212467 17.830813069415022 45 15.299150020144783 33.81935328749854 33.129069570981116 17.752427121375565 46 14.464522438688379 34.517597442262456 32.64925009422559 18.36863002482357 47 13.774726095941151 32.572976099190306 35.025847055612594 18.626450749255945 48 15.737380268510456 30.656784892712786 35.3341921942217 18.27164264455506 49 15.24448292892141 33.5741230521295 33.41475182927622 17.766642189672872 50 14.04863015478991 31.61244362710058 34.58842909686391 19.750497121245598 51 14.150816188607152 30.62819229819477 35.08668754792509 20.134303965272995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1067.0 1 7521.5 2 13976.0 3 57971.0 4 101966.0 5 59667.0 6 17368.0 7 17674.5 8 17981.0 9 21999.5 10 26018.0 11 29053.5 12 32089.0 13 31900.5 14 31712.0 15 28108.0 16 24504.0 17 20700.0 18 16896.0 19 14670.0 20 12444.0 21 11760.5 22 11077.0 23 10729.0 24 10381.0 25 10704.5 26 11256.5 27 11485.0 28 13531.5 29 15578.0 30 17840.0 31 20102.0 32 23475.0 33 26848.0 34 33153.0 35 39458.0 36 43439.5 37 47421.0 38 49001.5 39 50582.0 40 53317.0 41 56052.0 42 63553.0 43 71054.0 44 73815.5 45 76577.0 46 79033.5 47 81490.0 48 81124.0 49 80758.0 50 77920.0 51 75082.0 52 66375.5 53 57669.0 54 52147.0 55 46625.0 56 43056.0 57 39487.0 58 36762.0 59 34037.0 60 28558.0 61 23079.0 62 19490.0 63 15901.0 64 13070.0 65 10239.0 66 8426.5 67 6614.0 68 5323.5 69 4033.0 70 3889.0 71 3745.0 72 3668.5 73 3592.0 74 2992.5 75 1933.0 76 1473.0 77 1057.0 78 641.0 79 488.5 80 336.0 81 234.5 82 133.0 83 93.0 84 53.0 85 36.0 86 19.0 87 12.5 88 6.0 89 8.0 90 10.0 91 7.5 92 5.0 93 4.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1231088.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.50177698967972 #Duplication Level Percentage of deduplicated Percentage of total 1 78.27279458442464 26.22277708526405 2 8.993946416510322 6.026263742061158 3 3.3681725980420394 3.3851930172706366 4 1.8762824874523414 2.5143518985707947 5 1.2122942750887484 2.030700622494434 6 0.8516368351157507 1.711880839574671 7 0.629563953353293 1.4764057816188203 8 0.4972791123712788 1.332778713943077 9 0.3891621348114683 1.1733860747953335 >10 3.1206010058531883 22.830387487139962 >50 0.6358700055731503 14.591147401307298 >100 0.14689129582350066 7.328946882059022 >500 0.0037536106229351094 0.9103651771246162 >1k 0.00125120354097837 0.7972716488125149 >5k 2.5024070819567397E-4 0.7032925196517548 >10k+ 2.5024070819567397E-4 6.964851108311894 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 83078 6.748339680022875 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8389 0.6814297596922397 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3421 0.27788427797200527 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1826 0.14832408406222788 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 1575 0.12793561467579895 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1457 0.1183505971953264 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07107534148655498 0.0 2 0.0 0.0 0.0 0.2345892413864809 0.0 3 0.0 0.0 0.0 0.40183967352455713 0.0 4 0.0 0.0 0.0 0.5129608931286797 0.0 5 0.0 0.0 0.0 1.1184415736324291 0.0 6 0.0 0.0 0.0 1.3396280363385884 0.0 7 0.0 0.0 0.0 1.8538073638927517 0.0 8 0.0 0.0 0.0 2.4284210389509115 0.0 9 0.0 0.0 0.0 2.8833844534265625 0.0 10 0.0 0.0 0.0 3.195547353235512 0.0 11 0.0 0.0 0.0 3.5252557087714282 0.0 12 0.0 0.0 0.0 3.800134515160573 0.0 13 0.0 0.0 0.0 3.926445550602394 0.0 14 0.0 0.0 0.0 4.033586551083269 0.0 15 0.0 0.0 0.0 4.359477145419336 0.0 16 0.0 0.0 0.0 4.758717492169528 0.0 17 0.0 0.0 0.0 5.229926698984963 0.0 18 0.0 0.0 0.0 5.468658617418089 0.0 19 0.0 0.0 0.0 5.745893063696503 0.0 20 0.0 0.0 0.0 6.068209583717817 0.0 21 0.0 0.0 0.0 6.392231911934809 0.0 22 0.0 0.0 0.0 6.753457104609906 0.0 23 0.0 0.0 0.0 7.051892309891738 0.0 24 4.061448084945999E-4 0.0 0.0 7.307601081319938 0.0 25 4.061448084945999E-4 0.0 0.0 7.549094784450827 0.0 26 4.061448084945999E-4 0.0 0.0 7.819505997946532 0.0 27 4.873737701935199E-4 0.0 0.0 8.076676890685313 0.0 28 4.873737701935199E-4 0.0 0.0 8.353586421116932 0.0 29 4.873737701935199E-4 0.0 0.0 8.673384843325579 0.0 30 4.873737701935199E-4 0.0 0.0 8.961016596701453 0.0 31 4.873737701935199E-4 0.0 0.0 9.22159910583159 0.0 32 4.873737701935199E-4 0.0 0.0 9.496721599105832 0.0 33 4.873737701935199E-4 0.0 0.0 9.799705626242803 0.0 34 4.873737701935199E-4 0.0 0.0 10.148665245701363 0.0 35 4.873737701935199E-4 0.0 0.0 10.451161899068142 0.0 36 4.873737701935199E-4 0.0 0.0 10.752277660086039 0.0 37 4.873737701935199E-4 0.0 0.0 11.072157311256385 0.0 38 4.873737701935199E-4 0.0 0.0 11.399022653132839 0.0 39 4.873737701935199E-4 0.0 0.0 11.727431345281571 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAGT 20 7.0334814E-4 45.000004 33 GACGTGT 40 6.8157533E-9 45.000004 43 CCATCGG 20 7.0334814E-4 45.000004 1 CTTGCGG 310 0.0 45.000004 1 CATACGG 60 0.0 45.000004 1 ATGCGAT 20 7.0334814E-4 45.000004 32 CGAGAAT 40 6.8157533E-9 45.000004 5 GAACACG 20 7.0334814E-4 45.000004 8 TCGACTA 20 7.0334814E-4 45.000004 27 CTTACGT 20 7.0334814E-4 45.000004 31 CGGACTG 20 7.0334814E-4 45.000004 5 TCTGCGA 25 3.8909686E-5 45.0 1 CGTGACG 25 3.8909686E-5 45.0 11 TGCGGAT 25 3.8909686E-5 45.0 33 AGCGCAA 25 3.8909686E-5 45.0 13 TCGTCGA 25 3.8909686E-5 45.0 31 AGCGATA 25 3.8909686E-5 45.0 7 TCCCGTA 55 1.8189894E-12 45.0 29 CCGAATC 25 3.8909686E-5 45.0 21 CATCCGG 55 1.8189894E-12 45.0 1 >>END_MODULE