##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043459_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4296778 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49379441991185 31.0 31.0 33.0 30.0 34.0 2 30.524161127244646 31.0 31.0 34.0 26.0 34.0 3 31.523492486695844 31.0 31.0 34.0 28.0 34.0 4 35.14506311473388 37.0 35.0 37.0 32.0 37.0 5 35.46890460712655 37.0 35.0 37.0 33.0 37.0 6 35.720255503076956 37.0 35.0 37.0 35.0 37.0 7 33.65148653246688 37.0 35.0 37.0 31.0 37.0 8 34.674095566491914 37.0 35.0 37.0 31.0 37.0 9 36.69209207457309 39.0 37.0 39.0 32.0 39.0 10 36.66925798819488 39.0 35.0 39.0 32.0 39.0 11 36.47540249926806 39.0 35.0 39.0 32.0 39.0 12 36.48339639609028 39.0 35.0 39.0 32.0 39.0 13 36.509978639808715 39.0 35.0 39.0 32.0 39.0 14 37.74256966499084 40.0 36.0 41.0 33.0 41.0 15 37.802007224948554 40.0 36.0 41.0 33.0 41.0 16 37.58683646211184 40.0 36.0 41.0 32.0 41.0 17 37.56562056499079 40.0 36.0 41.0 32.0 41.0 18 37.41964211322996 39.0 36.0 41.0 32.0 41.0 19 37.25479626827357 39.0 35.0 41.0 32.0 41.0 20 37.05421574025933 39.0 35.0 41.0 32.0 41.0 21 36.93914626261817 38.0 35.0 41.0 32.0 41.0 22 36.870125242681844 38.0 35.0 41.0 32.0 41.0 23 36.82467281297754 38.0 35.0 40.0 32.0 41.0 24 36.69681398480443 38.0 35.0 40.0 31.0 41.0 25 36.57906226479469 38.0 35.0 40.0 31.0 41.0 26 36.301832210088584 38.0 35.0 40.0 31.0 41.0 27 36.17620575231022 38.0 35.0 40.0 30.0 41.0 28 35.9928869957908 38.0 35.0 40.0 30.0 41.0 29 35.899757911625876 38.0 35.0 40.0 30.0 41.0 30 35.76259280791328 37.0 34.0 40.0 30.0 41.0 31 35.6105805326689 38.0 34.0 40.0 29.0 41.0 32 35.54726215783082 38.0 34.0 40.0 28.0 41.0 33 35.28227476495179 37.0 34.0 40.0 26.0 41.0 34 35.19588957120894 37.0 34.0 40.0 26.0 41.0 35 35.07773080201025 37.0 34.0 40.0 26.0 41.0 36 34.96251959026042 37.0 34.0 40.0 25.0 41.0 37 34.85022381887079 37.0 34.0 40.0 25.0 41.0 38 34.7276317277737 37.0 34.0 40.0 24.0 41.0 39 34.57841643203349 36.0 34.0 40.0 24.0 41.0 40 34.48400778443755 36.0 34.0 40.0 24.0 41.0 41 34.39182382706298 36.0 33.0 40.0 23.0 41.0 42 34.25918839651479 35.0 33.0 40.0 23.0 41.0 43 34.08256814757476 35.0 33.0 40.0 23.0 41.0 44 33.855799624742076 35.0 33.0 40.0 23.0 41.0 45 33.62143983235811 35.0 33.0 40.0 22.0 41.0 46 33.60460535778204 35.0 33.0 39.0 22.0 41.0 47 33.55609621907392 35.0 33.0 39.0 23.0 41.0 48 33.44856285337525 35.0 33.0 39.0 22.0 41.0 49 33.414629985538 35.0 33.0 39.0 22.0 41.0 50 33.34989170955539 35.0 33.0 39.0 22.0 41.0 51 32.9212163160396 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 5.0 11 17.0 12 37.0 13 62.0 14 115.0 15 215.0 16 524.0 17 1190.0 18 2342.0 19 4354.0 20 7280.0 21 11800.0 22 17308.0 23 25910.0 24 38783.0 25 56237.0 26 74035.0 27 89610.0 28 98421.0 29 106506.0 30 119955.0 31 140257.0 32 170336.0 33 225897.0 34 403874.0 35 425711.0 36 430334.0 37 498579.0 38 610901.0 39 735784.0 40 392.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.89882698151964 17.262074047111582 24.025839826958713 27.81325914441007 2 30.475858887752636 21.262047981068605 27.283746099984686 20.978347031194073 3 27.5677728753964 21.86678017807762 31.06620821462035 19.499238731905628 4 24.533243281361056 24.68721912093201 27.890409976964136 22.889127620742798 5 22.5906016089265 34.74161336703921 25.94320674700904 16.724578277025252 6 84.16257484096222 2.237839609121067 12.194300008052545 1.4052855418641597 7 79.39893566760955 7.517190788074227 11.554960484344317 1.5289130599719138 8 78.85280552078791 3.6543661320179908 14.508941350937842 2.9838869962562646 9 45.93809594072582 18.25423608108215 20.713055224170297 15.094612754021735 10 30.306243422396967 18.18720911343337 27.775928847150123 23.730618617019545 11 26.473092163476913 14.570056912412044 38.11681683345055 20.840034090660488 12 21.961572136144806 16.99627022852938 38.25189479186498 22.790262843460845 13 18.534329676795032 21.580519170410945 40.04984665253825 19.835304500255774 14 19.46525978302812 18.739064480408345 40.37185537628428 21.42382036027926 15 24.324994216596714 14.28395881751396 39.510814847776636 21.880232118112687 16 23.727895646458812 15.665878013711671 35.03909208248599 25.567134257343525 17 24.129894539582917 19.722452498127666 34.14914617417982 21.9985067881096 18 25.504668847215285 23.034934548631554 30.201606878456367 21.25878972569679 19 26.953033179745383 20.399448144633027 29.823928534357602 22.82359014126399 20 27.333574133920813 21.93392351198968 32.14541221352371 18.587090140565792 21 23.71402478787594 17.923779166622058 33.70688455396113 24.65531149154087 22 25.307963315768234 20.237140480611284 31.829338169204924 22.625558034415555 23 26.502090636286074 19.661569669180025 32.78163312137606 21.05470657315784 24 27.980873110037336 17.151875195786236 31.04689141491601 23.820360279260413 25 22.228679256875733 19.558608799430644 31.71813856801538 26.494573375678243 26 20.628387131008395 19.16319623680814 34.30475114143668 25.903665490746786 27 22.230913489130693 21.417140936767037 33.61688688594105 22.73505868816122 28 23.98066644355375 22.71846485901762 31.068628632896555 22.232240064532075 29 23.07056589844763 19.461117144055383 35.41206922954828 22.056247727948712 30 29.146653608820376 20.072342578555375 30.06578417595696 20.71521963666729 31 28.70134319250378 20.636532769437938 29.37359109546735 21.288532942590937 32 29.115909642062025 18.82024158567187 28.144414256449835 23.91943451581627 33 24.049601817920312 21.979329627921203 31.39654876281716 22.574519791341327 34 24.265763788587634 22.065766488284943 30.15540947193455 23.513060251192872 35 27.224655311491542 25.186663122926063 26.858124855414918 20.73055671016748 36 25.466151614069894 24.21661067897853 27.107939949422565 23.20929775752901 37 26.047145093369963 27.778093259647115 25.333703533205576 20.841058113777347 38 25.16571719553582 23.277744393589803 25.728487718006377 25.828050692868004 39 23.989975744616082 20.683684379318642 31.466531433553236 23.85980844251204 40 21.96320126383071 21.988662202236185 31.29135366081282 24.75678287312028 41 21.92265925770426 25.686479496962605 26.72872557064852 25.66213567468461 42 21.270030706729553 20.565805354616877 29.1086018407281 29.05556209792547 43 22.16495709110408 20.02023376585898 31.88179608069116 25.933013062345783 44 25.451233459117507 21.804896599265774 29.78324688871522 22.9606230529015 45 26.190135957687367 22.71755720216404 29.23627890479797 21.856027935350628 46 23.963816608630932 22.821588641535588 28.6519108038628 24.56268394597068 47 21.945211039527756 25.1766323510314 30.50578829066803 22.37236831877281 48 24.454067675825932 24.276190205777446 29.619310097007574 21.650432021389047 49 22.834435477001605 21.560597266137556 31.316768052712984 24.288199204147855 50 21.10099707269028 22.63486733547789 33.820225294395016 22.443910297436823 51 21.345994603398175 20.37235807854164 31.72954246181674 26.552104856243446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1839.0 1 16870.5 2 31902.0 3 108098.0 4 184294.0 5 112207.0 6 40120.0 7 35954.5 8 31789.0 9 31360.5 10 30932.0 11 30393.5 12 29855.0 13 28347.5 14 26840.0 15 24911.0 16 22982.0 17 21753.0 18 20524.0 19 19240.5 20 17957.0 21 17928.0 22 17899.0 23 18023.0 24 18147.0 25 18346.0 26 21140.0 27 23735.0 28 26770.0 29 29805.0 30 33612.0 31 37419.0 32 43810.5 33 50202.0 34 54173.5 35 58145.0 36 64931.0 37 71717.0 38 73908.0 39 76099.0 40 87817.0 41 99535.0 42 114473.0 43 129411.0 44 142660.0 45 155909.0 46 168041.0 47 180173.0 48 211883.5 49 243594.0 50 246037.0 51 248480.0 52 236521.0 53 224562.0 54 231674.5 55 238787.0 56 253500.0 57 268213.0 58 278022.0 59 287831.0 60 292958.5 61 298086.0 62 288211.0 63 278336.0 64 258661.0 65 238986.0 66 204397.0 67 169808.0 68 142499.0 69 115190.0 70 101167.5 71 87145.0 72 82115.0 73 77085.0 74 65958.5 75 41772.5 76 28713.0 77 21920.5 78 15128.0 79 11985.0 80 8842.0 81 6453.0 82 4064.0 83 3003.0 84 1942.0 85 1417.0 86 892.0 87 584.5 88 277.0 89 197.0 90 117.0 91 90.0 92 63.0 93 39.0 94 15.0 95 13.5 96 12.0 97 7.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4296778.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.155279029733393 #Duplication Level Percentage of deduplicated Percentage of total 1 77.67043822181584 17.208102311659996 2 9.299937279100504 4.120854107549825 3 2.8597278756915854 1.9007420710516139 4 1.4546667341488702 1.289141895613569 5 0.8522315071761002 0.9440713419708369 6 0.5842719100782174 0.7766824318210925 7 0.4237596163065397 0.6571958778562903 8 0.3499422589044982 0.620245471225949 9 0.276510356205097 0.5513547686701408 >10 4.158267180683374 23.229888959041997 >50 1.5445102046144021 24.0494145346593 >100 0.5137480082527185 16.215406945363064 >500 0.00712544681508606 1.0438468083787988 >1k 0.0038454792335378624 1.473769262980593 >5k 4.5240932159268973E-4 0.7209977727027681 >10k+ 5.655116519908621E-4 5.198285439454229 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 118887 2.7668871884933317 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 44592 1.0378008824286478 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 17131 0.39869409124697625 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 13928 0.3241498629903616 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12911 0.3004809650393853 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8292 0.19298181102211936 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8065 0.18769878266924658 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 7253 0.16880090151271487 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5163 0.12015980346203596 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03225672818097654 0.0 2 0.0 0.0 0.0 0.10631221813181878 0.0 3 0.0 0.0 0.0 0.16435571025545187 0.0 4 0.0 0.0 0.0 0.20329186194865081 0.0 5 0.0 2.3273252655827228E-5 0.0 0.4393059171313947 0.0 6 0.0 2.3273252655827228E-5 0.0 0.520227016615706 0.0 7 0.0 2.3273252655827228E-5 0.0 0.7421840271943303 0.0 8 0.0 2.3273252655827228E-5 0.0 0.99735196931282 0.0 9 0.0 2.3273252655827228E-5 0.0 1.2301775888817155 0.0 10 0.0 2.3273252655827228E-5 0.0 1.3916706890605006 0.0 11 0.0 2.3273252655827228E-5 0.0 1.5506502779524565 0.0 12 0.0 2.3273252655827228E-5 0.0 1.6861937014199941 0.0 13 0.0 2.3273252655827228E-5 0.0 1.7559669128821642 0.0 14 0.0 2.3273252655827228E-5 0.0 1.805050202733304 0.0 15 0.0 2.3273252655827228E-5 0.0 1.9509036771273731 0.0 16 0.0 2.3273252655827228E-5 0.0 2.1145379165504945 0.0 17 0.0 2.3273252655827228E-5 0.0 2.3378680490358126 0.0 18 0.0 2.3273252655827228E-5 0.0 2.4667553222437837 0.0 19 0.0 2.3273252655827228E-5 0.0 2.61435429058704 0.0 20 0.0 2.3273252655827228E-5 0.0 2.7787332740951474 0.0 21 0.0 2.3273252655827228E-5 0.0 2.9515604483173203 0.0 22 2.3273252655827228E-5 2.3273252655827228E-5 0.0 3.130508487987976 0.0 23 2.3273252655827228E-5 2.3273252655827228E-5 0.0 3.291536123113645 0.0 24 6.981975796748168E-5 2.3273252655827228E-5 0.0 3.4273122791077406 0.0 25 6.981975796748168E-5 2.3273252655827228E-5 0.0 3.5612498481420265 0.0 26 6.981975796748168E-5 2.3273252655827228E-5 0.0 3.711618333551326 0.0 27 6.981975796748168E-5 2.3273252655827228E-5 0.0 3.8778126307665883 0.0 28 6.981975796748168E-5 2.3273252655827228E-5 0.0 4.042191614274696 0.0 29 6.981975796748168E-5 2.3273252655827228E-5 0.0 4.215763532581856 0.0 30 6.981975796748168E-5 2.3273252655827228E-5 0.0 4.386216835033134 0.0 31 9.309301062330891E-5 2.3273252655827228E-5 0.0 4.567212920937503 0.0 32 9.309301062330891E-5 2.3273252655827228E-5 0.0 4.776230003039487 0.0 33 9.309301062330891E-5 2.3273252655827228E-5 0.0 4.976286882868978 0.0 34 9.309301062330891E-5 2.3273252655827228E-5 0.0 5.209275415206464 0.0 35 9.309301062330891E-5 2.3273252655827228E-5 0.0 5.415034241936633 0.0 36 9.309301062330891E-5 2.3273252655827228E-5 0.0 5.637270531547126 0.0 37 9.309301062330891E-5 2.3273252655827228E-5 0.0 5.913012029013368 0.0 38 9.309301062330891E-5 2.3273252655827228E-5 0.0 6.194990758191371 0.0 39 9.309301062330891E-5 2.3273252655827228E-5 0.0 6.55607527314653 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAT 20 7.035447E-4 45.0 14 CGTTTTT 33415 0.0 43.88224 1 TATACGG 245 0.0 42.2449 1 TTCCGTA 615 0.0 41.341465 45 ACTTACT 13515 0.0 40.738068 37 CACTTAC 13595 0.0 40.531445 36 CGTTTTA 1815 0.0 40.413223 1 CTTACTG 13650 0.0 40.25275 38 CGCACTT 13705 0.0 40.222546 34 ACCCGCA 13735 0.0 39.987263 31 CCGCACT 13770 0.0 39.95098 33 GCACTTA 13870 0.0 39.67916 35 CCCGCAC 13940 0.0 39.673603 32 TTATGAC 14355 0.0 39.373043 26 CTTATGA 14400 0.0 39.25 25 GCGCGAC 5370 0.0 39.217876 8 CAACGCA 14705 0.0 39.185654 16 CGGTCTA 1005 0.0 39.179104 30 AGGGTAC 2125 0.0 39.176468 5 TAGCATA 4665 0.0 39.163986 29 >>END_MODULE