##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043457_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3749530 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.507496406216244 31.0 31.0 33.0 30.0 34.0 2 30.558059276762688 31.0 31.0 34.0 26.0 34.0 3 31.51975074209301 31.0 31.0 34.0 28.0 34.0 4 35.13735428173664 37.0 35.0 37.0 32.0 37.0 5 35.45467245228068 37.0 35.0 37.0 33.0 37.0 6 35.74990438801663 37.0 35.0 37.0 35.0 37.0 7 33.74969422834329 37.0 35.0 37.0 32.0 37.0 8 34.74572999815977 37.0 35.0 37.0 31.0 37.0 9 36.72001210818423 39.0 37.0 39.0 32.0 39.0 10 36.70913794528914 39.0 35.0 39.0 32.0 39.0 11 36.545898285918504 39.0 35.0 39.0 32.0 39.0 12 36.54912562374484 39.0 35.0 39.0 32.0 39.0 13 36.57455467751958 39.0 35.0 39.0 33.0 39.0 14 37.81597213517428 40.0 36.0 41.0 33.0 41.0 15 37.864218448712236 40.0 36.0 41.0 33.0 41.0 16 37.67978920024643 40.0 36.0 41.0 32.0 41.0 17 37.64729819470707 40.0 36.0 41.0 32.0 41.0 18 37.451654207327316 39.0 36.0 41.0 32.0 41.0 19 37.251242955783795 39.0 35.0 41.0 32.0 41.0 20 37.00681472077834 38.0 35.0 41.0 32.0 41.0 21 36.90461551181081 38.0 35.0 41.0 32.0 41.0 22 36.831144703469505 38.0 35.0 40.0 32.0 41.0 23 36.77915338722453 38.0 35.0 40.0 32.0 41.0 24 36.63842988321203 38.0 35.0 40.0 32.0 41.0 25 36.533159889372804 38.0 35.0 40.0 31.0 41.0 26 36.263772259456516 38.0 35.0 40.0 31.0 41.0 27 36.14534248292453 38.0 35.0 40.0 31.0 41.0 28 35.97166338181052 37.0 35.0 40.0 30.0 41.0 29 35.847907871119844 37.0 35.0 40.0 30.0 41.0 30 35.687028240872856 37.0 34.0 40.0 30.0 41.0 31 35.46325139417473 37.0 34.0 40.0 29.0 41.0 32 35.33814958141421 37.0 34.0 40.0 27.0 41.0 33 35.06364851061333 37.0 34.0 40.0 25.0 41.0 34 34.898306721109044 37.0 34.0 40.0 24.0 41.0 35 34.753150928249674 37.0 34.0 40.0 23.0 41.0 36 34.645400623544816 37.0 34.0 40.0 23.0 41.0 37 34.534137078513844 37.0 34.0 40.0 23.0 41.0 38 34.4109389710177 37.0 34.0 40.0 23.0 41.0 39 34.28358647617168 36.0 34.0 40.0 23.0 41.0 40 34.17006664835326 36.0 33.0 40.0 22.0 41.0 41 34.073292652679136 36.0 33.0 40.0 22.0 41.0 42 33.951779823071156 36.0 33.0 40.0 22.0 41.0 43 33.779651849698496 35.0 33.0 40.0 21.0 41.0 44 33.55562430491288 35.0 33.0 40.0 20.0 41.0 45 33.346677316890386 35.0 33.0 40.0 20.0 41.0 46 33.329197259389844 35.0 33.0 40.0 20.0 41.0 47 33.284271362010706 35.0 33.0 40.0 20.0 41.0 48 33.189717377911364 35.0 33.0 39.0 20.0 41.0 49 33.15043405440149 35.0 33.0 39.0 20.0 41.0 50 33.06719562185127 35.0 33.0 39.0 20.0 41.0 51 32.635814088699114 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 7.0 11 10.0 12 28.0 13 54.0 14 116.0 15 230.0 16 505.0 17 1087.0 18 2206.0 19 4157.0 20 7191.0 21 11127.0 22 16376.0 23 25253.0 24 38146.0 25 56602.0 26 74781.0 27 87389.0 28 92734.0 29 98321.0 30 107133.0 31 122928.0 32 145842.0 33 190708.0 34 335494.0 35 363187.0 36 371553.0 37 403493.0 38 516016.0 39 676541.0 40 313.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.064549423527748 17.18783420855414 23.588423082359654 30.159193285558455 2 32.65494608657619 20.009574533341514 27.29182057484538 20.043658805236923 3 26.054225462924684 21.33624747635037 33.90920995431427 18.70031710641067 4 22.92063271930082 23.98348593023659 31.567263096974823 21.52861825348777 5 21.274266374718962 33.13543297426611 29.602723541350517 15.98757710966441 6 80.71510295957093 2.1776596000032002 15.697914138572033 1.4093233018538325 7 76.61248209775626 7.292300635012921 14.605990617490724 1.4892266497401008 8 75.80651441647353 3.582262310209546 17.598739041959927 3.012484231356997 9 42.22222518555659 18.508239699375657 24.304352812219133 14.965182302848623 10 28.939307059818166 19.355919275215825 31.26367838102376 20.441095283942254 11 26.120980496222195 16.18781553954762 39.08740562150456 18.60379834272562 12 21.332326984982117 18.063437284139614 39.499350585273355 21.104885145604914 13 18.180091904852073 21.795878416761568 41.184335103332955 18.839694575053407 14 18.930665976802427 19.567412449026943 41.627670668057064 19.874250906113566 15 23.14652769813817 16.143569994105928 40.59255426680144 20.117348040954468 16 22.40830184049734 17.513234992119013 36.92404114649036 23.154422020893286 17 22.875267033468194 20.25307171832203 37.06317858504933 19.808482663160447 18 23.731587692324105 23.805383608078877 33.451712614647704 19.011316084949314 19 25.106373332124292 21.36654460692407 33.33300440321854 20.194077657733104 20 24.671465490341458 23.29147919872624 34.8278850949319 17.209170216000405 21 21.67140948332191 19.152480444215676 36.13754257200236 23.038567500460058 22 22.700365112427423 21.14889066096284 35.07500940117828 21.075734825431454 23 24.005808728027244 20.11172066899051 36.69099860515851 19.19147199782373 24 24.97507687630183 18.5397103103589 34.391750432720904 22.09346238061837 25 20.65226841764168 20.171754859942446 35.07418263088974 24.101794091526138 26 18.87844609857769 20.502222945275808 36.75730024829779 23.862030707848717 27 20.358631615162434 22.323997941075284 36.62136321085576 20.696007232906524 28 22.6471584438583 22.564108034873705 34.40524545743067 20.383488063837333 29 21.393427976306363 20.915821449621685 38.15928929759196 19.531461276479988 30 26.488973284651678 20.969348158302505 33.91729096713455 18.62438758991127 31 26.656247583030407 21.735124135558323 32.01131875195025 19.597309529461025 32 26.470544308219964 20.560070195464498 31.365904526700678 21.603480969614857 33 22.401154278002842 22.355441882049217 34.173083026405976 21.070320813541965 34 21.955045032310714 23.83650750894112 33.25878176731484 20.949665691433324 35 24.920216667155618 26.452142001797558 29.922470282942125 18.705171048104695 36 23.585836091456798 25.410358098214974 29.863582902390434 21.140222907937794 37 23.49803842081541 28.30706781916667 28.53082919725939 19.664064562758533 38 23.368982245774802 24.7843062997229 28.144594122463353 23.70211733203895 39 22.72135440975269 22.47161644259414 32.81499281243249 21.99203633522068 40 20.57788576168213 23.27931767448187 32.95685059194086 23.185945971895144 41 20.19895826943644 26.585652068392573 28.836387493899235 24.379002168271757 42 19.926604134384842 21.98011484106008 31.181108032206705 26.912172992348378 43 21.030635839691907 21.488559899507408 33.252354295071655 24.228449965729038 44 23.261235408171157 23.63733587943022 31.239035292423317 21.862393419975305 45 24.30032564081365 23.416401522324133 31.222526556661766 21.06074628020045 46 21.868287492032334 24.500164020557243 30.754467893309297 22.877080594101127 47 20.247364336330154 25.912100983323246 32.32661160198745 21.513923078359156 48 22.230039498283784 24.860635866361918 32.28265942664814 20.626665208706157 49 21.380252991708293 22.610780551162414 33.62338746456223 22.38557899256707 50 19.375095011908158 23.655978215936397 35.42518662339013 21.543740148765313 51 19.29652516448728 21.357423463740787 34.61175133950122 24.734300032270713 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2082.0 1 18272.0 2 34462.0 3 126513.5 4 218565.0 5 132822.5 6 47080.0 7 41727.0 8 36374.0 9 36092.0 10 35810.0 11 35942.5 12 36075.0 13 34486.5 14 32898.0 15 30818.0 16 28738.0 17 27028.0 18 25318.0 19 23008.5 20 20699.0 21 20150.5 22 19602.0 23 19737.0 24 19872.0 25 20176.0 26 23520.0 27 26560.0 28 29404.5 29 32249.0 30 36636.5 31 41024.0 32 47498.0 33 53972.0 34 62399.5 35 70827.0 36 76122.0 37 81417.0 38 86735.0 39 92053.0 40 98288.5 41 104524.0 42 117629.5 43 130735.0 44 140823.5 45 150912.0 46 161231.0 47 171550.0 48 194812.0 49 218074.0 50 219815.0 51 221556.0 52 207474.5 53 193393.0 54 191784.0 55 190175.0 56 198913.5 57 207652.0 58 212952.5 59 218253.0 60 222674.0 61 227095.0 62 216050.0 63 205005.0 64 185555.0 65 166105.0 66 139962.5 67 113820.0 68 94890.5 69 75961.0 70 65557.0 71 55153.0 72 53026.0 73 50899.0 74 43336.5 75 26855.5 76 17937.0 77 13783.5 78 9630.0 79 7253.0 80 4876.0 81 3601.5 82 2327.0 83 1607.5 84 888.0 85 813.0 86 738.0 87 444.0 88 150.0 89 120.0 90 90.0 91 80.0 92 70.0 93 45.5 94 21.0 95 14.5 96 8.0 97 5.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3749530.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.975453644536746 #Duplication Level Percentage of deduplicated Percentage of total 1 77.81173560564618 19.433833956197656 2 8.871395980719104 4.431342781575591 3 2.9402459129658687 2.20301926508453 4 1.4442177620327503 1.4427997507306223 5 0.8800115492508374 1.0989343827485627 6 0.6508843620924004 0.975367932803557 7 0.4722486280692763 0.8256236603328199 8 0.38946921134701423 0.778173618717731 9 0.3131822011036933 0.703968079136335 >10 4.711099225076723 28.85564752327469 >50 1.260917839079967 21.443208481084117 >100 0.2442441291664648 9.005131049732212 >500 0.006822589087713716 1.1605757208046568 >1k 0.0026153258169566655 1.0925020164349584 >5k 4.5483927251420273E-4 0.741199670564246 >10k+ 4.5483927251420273E-4 5.808672110777711 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 144791 3.8615773176904837 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 32521 0.8673353727000451 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15156 0.40421066106952075 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 12066 0.32180033230831595 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 9107 0.2428837747664374 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6214 0.1657274378388758 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5457 0.14553824079284605 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5321 0.1419111195269807 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 4038 0.10769349758503065 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.039551623803516706 0.0 2 0.0 0.0 0.0 0.12428224337450294 0.0 3 0.0 0.0 0.0 0.19599789840326654 0.0 4 0.0 0.0 0.0 0.24525740559483455 0.0 5 0.0 0.0 0.0 0.5286795945091785 0.0 6 0.0 0.0 0.0 0.6392267830901472 0.0 7 0.0 0.0 0.0 0.9151546993889901 0.0 8 0.0 0.0 0.0 1.2291673889794188 0.0 9 0.0 0.0 0.0 1.5181636098390998 0.0 10 0.0 0.0 0.0 1.7120545775070475 0.0 11 0.0 0.0 0.0 1.9012782935461245 0.0 12 0.0 0.0 0.0 2.0520171861539978 0.0 13 0.0 0.0 0.0 2.1321072241054213 0.0 14 0.0 0.0 0.0 2.1899278042848036 0.0 15 0.0 0.0 0.0 2.353148261248743 0.0 16 0.0 0.0 0.0 2.5432520875949787 0.0 17 0.0 0.0 0.0 2.788589503217737 0.0 18 0.0 0.0 0.0 2.9325275434521125 0.0 19 0.0 0.0 0.0 3.0980949612351414 0.0 20 0.0 0.0 0.0 3.2893722679909216 0.0 21 4.26720148925332E-4 0.0 0.0 3.4876904572039695 0.0 22 4.26720148925332E-4 0.0 0.0 3.688648977338493 0.0 23 4.26720148925332E-4 0.0 0.0 3.8677380898405933 0.0 24 5.067301768488317E-4 0.0 0.0 4.0208239432675565 0.0 25 5.067301768488317E-4 0.0 0.0 4.174656556955139 0.0 26 5.067301768488317E-4 0.0 0.0 4.338757124226237 0.0 27 5.067301768488317E-4 0.0 0.0 4.520886617789429 0.0 28 5.33400186156665E-4 0.0 0.0 4.697948809584134 0.0 29 5.33400186156665E-4 0.0 0.0 4.894266748099095 0.0 30 5.33400186156665E-4 0.0 0.0 5.079569972769921 0.0 31 5.33400186156665E-4 0.0 0.0 5.272554160121402 0.0 32 5.33400186156665E-4 0.0 0.0 5.50090277981507 0.0 33 5.33400186156665E-4 0.0 0.0 5.719676866167227 0.0 34 5.33400186156665E-4 0.0 0.0 5.975202225345576 0.0 35 5.33400186156665E-4 0.0 0.0 6.19178937093449 0.0 36 5.33400186156665E-4 0.0 0.0 6.431472744583988 0.0 37 5.600701954644982E-4 0.0 0.0 6.731963739455345 0.0 38 6.134102140801647E-4 0.0 0.0 7.029067643144607 0.0 39 6.134102140801647E-4 0.0 0.0 7.391379719591522 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTCGA 35 1.2129203E-7 45.0 42 CGTTTTT 39500 0.0 43.968987 1 ACGTAGG 280 0.0 41.785713 1 CGCACTT 9440 0.0 40.876587 34 CACTTAC 9510 0.0 40.764984 36 CGTTTTA 2175 0.0 40.75862 1 TAGCATA 3430 0.0 40.73615 29 ACCCGCA 9530 0.0 40.537773 31 GCACTTA 9535 0.0 40.516518 35 CCGCACT 9535 0.0 40.469326 33 CCCGCAC 9630 0.0 40.420563 32 TAGTAGG 705 0.0 40.21277 1 CCAGTAG 3515 0.0 40.199146 25 ACTTACT 9590 0.0 40.096455 37 TCAACGC 10145 0.0 40.032036 15 CTTACTG 9630 0.0 39.92991 38 TACGGGA 745 0.0 39.865772 3 CTTATGA 9950 0.0 39.84422 25 ATCAACG 10210 0.0 39.799217 14 CAACGCA 10200 0.0 39.75 16 >>END_MODULE