##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043456_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1124666 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.462387055356878 31.0 31.0 33.0 30.0 34.0 2 30.475295776701707 31.0 31.0 34.0 26.0 34.0 3 31.387358558007445 31.0 31.0 34.0 28.0 34.0 4 35.013819213882165 37.0 35.0 37.0 32.0 37.0 5 35.32891276165546 37.0 35.0 37.0 33.0 37.0 6 35.787869465245684 37.0 35.0 37.0 35.0 37.0 7 33.66982019550693 37.0 35.0 37.0 31.0 37.0 8 34.71466906619388 37.0 35.0 37.0 31.0 37.0 9 36.66369837800734 39.0 37.0 39.0 32.0 39.0 10 36.63811122591063 39.0 35.0 39.0 32.0 39.0 11 36.4256508154421 39.0 35.0 39.0 32.0 39.0 12 36.36695605628693 39.0 35.0 39.0 32.0 39.0 13 36.416137768902054 39.0 35.0 39.0 32.0 39.0 14 37.75927697645346 40.0 36.0 41.0 33.0 41.0 15 37.91138169020847 40.0 36.0 41.0 33.0 41.0 16 37.86695427798119 40.0 36.0 41.0 33.0 41.0 17 37.81998566685576 40.0 36.0 41.0 33.0 41.0 18 37.51729313413938 39.0 36.0 41.0 33.0 41.0 19 37.19676864064531 38.0 35.0 41.0 33.0 41.0 20 36.8779246460727 38.0 35.0 41.0 32.0 41.0 21 36.76636708142684 38.0 35.0 40.0 32.0 41.0 22 36.68145031502686 38.0 35.0 40.0 32.0 41.0 23 36.56190815762191 37.0 35.0 40.0 32.0 41.0 24 36.36991337872755 37.0 35.0 40.0 32.0 41.0 25 36.248257704954185 37.0 35.0 40.0 31.0 41.0 26 35.96334200553765 36.0 35.0 40.0 31.0 41.0 27 35.867902114939014 36.0 35.0 40.0 31.0 41.0 28 35.75959796063898 36.0 35.0 40.0 31.0 41.0 29 35.68258843069854 36.0 35.0 40.0 30.0 41.0 30 35.52060167196306 36.0 35.0 40.0 30.0 41.0 31 35.029889762827366 35.0 34.0 40.0 27.0 41.0 32 34.87071094885059 35.0 34.0 40.0 25.0 41.0 33 34.72452087997681 36.0 34.0 40.0 25.0 41.0 34 34.518409020989345 36.0 34.0 40.0 23.0 41.0 35 34.29391214813998 35.0 34.0 40.0 22.0 41.0 36 34.13472444263452 35.0 34.0 40.0 21.0 41.0 37 34.03569682021151 35.0 33.0 40.0 21.0 41.0 38 33.92645105302374 35.0 33.0 40.0 21.0 41.0 39 33.82217653952373 35.0 33.0 40.0 21.0 41.0 40 33.732933155265656 35.0 33.0 40.0 20.0 41.0 41 33.65407685481734 35.0 33.0 40.0 20.0 41.0 42 33.568911125614186 35.0 33.0 40.0 19.0 41.0 43 33.400411322116966 35.0 33.0 40.0 18.0 41.0 44 33.20399389685471 35.0 33.0 40.0 18.0 41.0 45 33.03480588903728 35.0 33.0 40.0 18.0 41.0 46 33.04312124666345 35.0 33.0 40.0 18.0 41.0 47 33.01414642213777 35.0 33.0 40.0 18.0 41.0 48 32.959344374240885 35.0 33.0 40.0 18.0 41.0 49 32.86403518911392 35.0 33.0 40.0 17.0 41.0 50 32.757993039711344 35.0 33.0 39.0 17.0 41.0 51 32.386141307730476 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 6.0 12 3.0 13 14.0 14 25.0 15 79.0 16 166.0 17 375.0 18 739.0 19 1413.0 20 2395.0 21 3662.0 22 5655.0 23 8707.0 24 13669.0 25 20211.0 26 25509.0 27 27688.0 28 27845.0 29 28541.0 30 31080.0 31 36069.0 32 44297.0 33 57499.0 34 94145.0 35 134806.0 36 135726.0 37 100954.0 38 127398.0 39 195908.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.325563322799837 17.996542973647287 25.48285446523679 31.195039238316085 2 33.213682995662715 19.800634143825814 28.202150682958315 18.78353217755316 3 20.856147514017493 20.867350840160544 40.44409629169905 17.832405354122912 4 21.537505357146035 24.51403349972347 37.23985609949976 16.70860504363073 5 18.75605735391663 30.12618857509696 35.4111353948639 15.706618676122512 6 76.0712958336075 2.1525501793421333 20.22902799586722 1.54712599118316 7 72.37464278283508 7.546062564352439 18.38083484341129 1.698459809401191 8 71.39106187970474 4.317459583556363 21.483000286307224 2.808478250431684 9 37.835855267252676 23.079563176978766 28.161427481581196 10.923154074187359 10 27.686797680377996 25.4701395792173 36.2250659306852 10.617996809719509 11 26.03315117554901 22.534512468590677 38.672014624786385 12.760321731073937 12 19.543846795404146 29.638488226726867 35.94498277710893 14.872682200760048 13 13.381750670865838 32.27002505632783 37.68105375284751 16.667170519958816 14 12.742360843130315 26.302119918269067 44.656813667346576 16.298705571254043 15 15.551817161717347 23.927637182950313 44.258295351686634 16.262250303645704 16 16.557982547707496 25.330098002429164 37.39279039288109 20.71912905698225 17 17.78723638840331 25.368776152208746 40.505981331346376 16.338006128041567 18 20.457451367783857 28.476098681741956 36.294953346148986 14.771496604325197 19 20.807688682684457 27.402357677746103 36.58383911312336 15.206114526446074 20 16.491029336709744 30.154641466888837 36.76069161866723 16.59363757773419 21 16.775202593481087 27.071859556526118 36.71774553511887 19.435192314873927 22 14.406232605947011 30.339763094109717 36.502214879795424 18.751789420147848 23 14.18430004997039 27.424586499458503 44.14750690427202 14.243606546299079 24 14.879884338994867 28.323075473073782 40.93570891269052 15.861331275240827 25 14.799771665543371 31.831139200438173 37.017834628236294 16.351254505782162 26 14.13050630142638 32.29572157422737 36.83715876535789 16.736613358988357 27 14.328342814666756 29.761013492005628 40.42738021777132 15.4832634755563 28 14.003713102378839 27.761753267192212 39.88028445778569 18.354249172643257 29 14.394762533943412 31.51077742191904 38.165108574456774 15.929351469680778 30 18.549951718999242 31.16276298918968 35.31759651309811 14.96968877871297 31 17.517823069249 29.888695843921663 35.52885923465278 17.064621852176558 32 17.16945297537224 30.44379397972376 35.51961204482042 16.86714100008358 33 14.205372972953748 30.02260226591717 36.14833203813399 19.62369272299509 34 14.30860362098614 30.204611858098318 36.81484102835864 18.6719434925569 35 18.535903103677004 30.490385590032954 34.568129560242774 16.40558174604727 36 15.966518059583912 32.90639176431047 35.02764376268154 16.099446413424072 37 15.620459763165243 32.2561542715793 34.93028152358122 17.19310444167424 38 15.339487456720486 33.70574019308844 33.47082600523177 17.483946344959303 39 18.064207506939837 29.6313750037789 33.869699982039116 18.434717507242148 40 14.64559255814615 29.844238200496857 35.10562246924865 20.404546772108343 41 15.712309254480886 30.672661928074646 32.72153688295013 20.893491934494328 42 15.715332374233773 29.923194975219307 34.61756645973116 19.743906190815764 43 15.54630441393267 31.130486740063272 34.66771468151433 18.655494164489724 44 13.513345295403257 35.18173395479191 33.07221877428499 18.232701975519845 45 15.434537898362713 32.68605968349714 33.926250104475464 17.95315231366468 46 15.334863861804305 32.0964624163974 33.033007132784306 19.535666589013985 47 14.811419568120668 30.634339439442464 35.590388613152705 18.96385237928416 48 15.885249487403371 28.709501309722175 36.32145010163017 19.08379910124428 49 15.888361522443105 31.49966301106284 34.31845543476908 18.293520031724974 50 14.224223013765865 31.272395537875248 34.82740653669622 19.675974911662664 51 14.774075147643833 29.215429291896438 35.92791104203381 20.082584518425914 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1287.0 1 7891.5 2 14496.0 3 55440.5 4 96385.0 5 56642.5 6 16900.0 7 16894.0 8 16888.0 9 20322.5 10 23757.0 11 26481.5 12 29206.0 13 28157.0 14 27108.0 15 23986.0 16 20864.0 17 17879.0 18 14894.0 19 12895.0 20 10896.0 21 9972.5 22 9049.0 23 8727.5 24 8406.0 25 8933.0 26 10420.5 27 11381.0 28 12205.0 29 13029.0 30 15140.5 31 17252.0 32 20407.5 33 23563.0 34 26617.0 35 29671.0 36 32967.5 37 36264.0 38 39645.0 39 43026.0 40 47822.0 41 52618.0 42 59967.5 43 67317.0 44 69024.5 45 70732.0 46 70689.5 47 70647.0 48 71266.0 49 71885.0 50 73800.5 51 75716.0 52 70201.5 53 64687.0 54 56617.5 55 48548.0 56 43173.0 57 37798.0 58 33767.0 59 29736.0 60 24858.5 61 19981.0 62 16752.0 63 13523.0 64 11427.0 65 9331.0 66 7420.5 67 5510.0 68 4550.5 69 3591.0 70 3282.0 71 2973.0 72 2777.5 73 2582.0 74 2311.5 75 1411.5 76 782.0 77 606.5 78 431.0 79 346.0 80 261.0 81 176.5 82 92.0 83 72.5 84 53.0 85 34.5 86 16.0 87 13.5 88 11.0 89 9.0 90 7.0 91 7.5 92 8.0 93 5.5 94 3.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1124666.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.905151976426254 #Duplication Level Percentage of deduplicated Percentage of total 1 78.89764429676956 26.75036620463992 2 9.009207580215627 6.1091710438876445 3 3.307960539345494 3.364707144555898 4 1.7585976079743044 2.385020766549939 5 1.095551179853716 1.857241462544667 6 0.7952380866133127 1.6177600910440078 7 0.6030697933807344 1.4313021097876049 8 0.46043917838583065 1.2489008255257943 9 0.36399630741866523 1.1107215109699036 >10 2.9134051724797945 21.77352930413857 >50 0.635533829638299 14.964798237133106 >100 0.15394534378487695 7.8859089454110505 >500 0.0037877588978641468 0.9355727817834244 >1k 0.0010822168279611848 0.6780815769137242 >5k 2.705542069902962E-4 0.7519256880359574 >10k+ 2.705542069902962E-4 7.134992307078786 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 77781 6.915919926449275 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8197 0.7288386063062278 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3297 0.293153700743154 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1550 0.13781869461689072 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1441 0.12812692835028355 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08935986328385494 0.0 2 0.0 0.0 0.0 0.28764095295847836 0.0 3 0.0 0.0 0.0 0.47543003878484813 0.0 4 0.0 0.0 0.0 0.5978663887767568 0.0 5 0.0 0.0 0.0 1.2973629504226143 0.0 6 0.0 0.0 0.0 1.5095148248457764 0.0 7 0.0 0.0 0.0 2.083463001459989 0.0 8 0.0 0.0 0.0 2.780647765647757 0.0 9 0.0 0.0 0.0 3.2900434440091546 0.0 10 0.0 0.0 0.0 3.6452600149733345 0.0 11 0.0 0.0 0.0 4.045112059936017 0.0 12 0.0 0.0 0.0 4.370364179231879 0.0 13 0.0 0.0 0.0 4.510050094872611 0.0 14 0.0 0.0 0.0 4.623061424458461 0.0 15 0.0 0.0 0.0 5.007264378935613 0.0 16 0.0 0.0 0.0 5.4716689221511094 0.0 17 0.0 0.0 0.0 6.027922956682251 0.0 18 0.0 0.0 0.0 6.3111181452982485 0.0 19 0.0 0.0 0.0 6.627656566482849 0.0 20 0.0 0.0 0.0 6.994698870598026 0.0 21 0.0 0.0 0.0 7.378990740362028 0.0 22 0.0 0.0 0.0 7.76070406680739 0.0 23 0.0 0.0 0.0 8.069062281601827 0.0 24 5.334917210976414E-4 0.0 0.0 8.331273462521317 0.0 25 5.334917210976414E-4 0.0 0.0 8.59321789758026 0.0 26 5.334917210976414E-4 0.0 0.0 8.89152868496069 0.0 27 5.334917210976414E-4 0.0 0.0 9.176324348739982 0.0 28 6.224070079472484E-4 0.0 0.0 9.465476861574903 0.0 29 7.113222947968552E-4 0.0 0.0 9.812691056722619 0.0 30 7.113222947968552E-4 0.0 0.0 10.140432804050269 0.0 31 7.113222947968552E-4 0.0 0.0 10.441766711183586 0.0 32 7.113222947968552E-4 0.0 0.0 10.769419543224389 0.0 33 7.113222947968552E-4 0.0 0.0 11.090848305185718 0.0 34 7.113222947968552E-4 0.0 0.0 11.46802695200175 0.0 35 7.113222947968552E-4 8.89152868496069E-5 0.0 11.788210899947185 0.0 36 7.113222947968552E-4 8.89152868496069E-5 0.0 12.108572678466318 0.0 37 7.113222947968552E-4 8.89152868496069E-5 0.0 12.450451956403057 0.0 38 7.113222947968552E-4 8.89152868496069E-5 0.0 12.798910965566666 0.0 39 7.113222947968552E-4 8.89152868496069E-5 0.0 13.182224767175322 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 30 2.1654596E-6 45.000004 37 GCAACCG 30 2.1654596E-6 45.000004 35 ACCGTGG 30 2.1654596E-6 45.000004 1 ACCGTAG 30 2.1654596E-6 45.000004 38 TTACCGG 75 0.0 45.000004 1 CAATACG 30 2.1654596E-6 45.000004 23 TCGCCGT 35 1.2119017E-7 45.0 24 CAGCGTT 25 3.890753E-5 45.0 22 GGTACGC 25 3.890753E-5 45.0 7 CAACGTC 25 3.890753E-5 45.0 26 CGACGGT 295 0.0 45.0 27 GCGCGAA 20 7.0332224E-4 45.0 32 CGGTTAG 20 7.0332224E-4 45.0 30 CAACCGG 35 1.2119017E-7 45.0 1 ATTCGCG 20 7.0332224E-4 45.0 10 CGTTCGA 35 1.2119017E-7 45.0 13 TACGACC 20 7.0332224E-4 45.0 32 GTCGTCG 35 1.2119017E-7 45.0 24 AACGATG 20 7.0332224E-4 45.0 28 GCGATAT 145 0.0 45.0 8 >>END_MODULE