##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043452_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1851856 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.543454782661286 31.0 31.0 33.0 30.0 34.0 2 30.527713817921047 31.0 31.0 34.0 26.0 34.0 3 31.460513668449384 31.0 31.0 34.0 28.0 34.0 4 35.079249682480715 37.0 35.0 37.0 32.0 37.0 5 35.409092283633285 37.0 35.0 37.0 33.0 37.0 6 35.88382304023639 37.0 35.0 37.0 35.0 37.0 7 33.69948581315178 37.0 35.0 37.0 32.0 37.0 8 34.763406549969325 37.0 35.0 37.0 31.0 37.0 9 36.82642062881779 39.0 37.0 39.0 32.0 39.0 10 36.68969509508299 39.0 35.0 39.0 32.0 39.0 11 36.7517220561426 39.0 35.0 39.0 33.0 39.0 12 36.8184756266146 39.0 37.0 39.0 33.0 39.0 13 36.84859513914689 39.0 37.0 39.0 33.0 39.0 14 38.12145598793859 40.0 37.0 41.0 33.0 41.0 15 38.216648594707145 40.0 37.0 41.0 33.0 41.0 16 38.18828299824608 40.0 37.0 41.0 33.0 41.0 17 38.09684716306236 40.0 37.0 41.0 33.0 41.0 18 37.82784568562566 39.0 37.0 41.0 33.0 41.0 19 37.5576216509275 39.0 36.0 41.0 33.0 41.0 20 37.16440911172359 39.0 35.0 41.0 33.0 41.0 21 37.11553274120666 38.0 35.0 41.0 33.0 41.0 22 37.056086434366385 38.0 35.0 40.0 33.0 41.0 23 36.966000596158665 38.0 35.0 40.0 33.0 41.0 24 36.81952160427161 38.0 35.0 40.0 32.0 41.0 25 36.74921106176722 38.0 35.0 40.0 32.0 41.0 26 36.491307099472095 38.0 35.0 40.0 32.0 41.0 27 36.37590827796546 38.0 35.0 40.0 31.0 41.0 28 36.27198659075004 38.0 35.0 40.0 31.0 41.0 29 36.195740921540335 38.0 35.0 40.0 31.0 41.0 30 35.96693857405759 38.0 35.0 40.0 30.0 41.0 31 35.5031341529795 38.0 35.0 40.0 29.0 41.0 32 35.271585911647556 38.0 35.0 40.0 26.0 41.0 33 34.95032065128174 38.0 34.0 40.0 24.0 41.0 34 34.733671516575804 38.0 34.0 40.0 23.0 41.0 35 34.53091439075177 38.0 34.0 40.0 21.0 41.0 36 34.348794938699335 38.0 34.0 40.0 20.0 41.0 37 34.21439733974996 37.0 34.0 40.0 18.0 41.0 38 34.08863000146879 37.0 34.0 40.0 18.0 41.0 39 33.995939749094966 37.0 34.0 40.0 18.0 41.0 40 33.91377029315454 37.0 33.0 40.0 18.0 41.0 41 33.814505015508765 37.0 33.0 40.0 18.0 41.0 42 33.713940500773276 37.0 33.0 40.0 18.0 41.0 43 33.55658377325235 37.0 33.0 40.0 16.0 41.0 44 33.36030177292403 36.0 33.0 40.0 15.0 41.0 45 33.14326275909142 36.0 33.0 40.0 15.0 41.0 46 33.15671466895914 36.0 33.0 40.0 15.0 41.0 47 33.11669751859756 36.0 33.0 40.0 15.0 41.0 48 33.04995096810983 36.0 33.0 40.0 15.0 41.0 49 32.967192373489084 35.0 33.0 40.0 13.0 41.0 50 32.85637382172264 35.0 33.0 40.0 12.0 41.0 51 32.44253926871204 35.0 32.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 4.0 12 8.0 13 14.0 14 45.0 15 87.0 16 180.0 17 479.0 18 951.0 19 1824.0 20 3284.0 21 5475.0 22 8678.0 23 13887.0 24 22833.0 25 34522.0 26 44048.0 27 47576.0 28 46636.0 29 46321.0 30 48835.0 31 55956.0 32 66690.0 33 85541.0 34 130826.0 35 175085.0 36 196824.0 37 188002.0 38 243241.0 39 383862.0 40 139.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.77109451274829 18.115717420792976 25.005399987904024 32.107788078554705 2 33.85614216224156 19.622368045895577 28.092411072999194 18.42907871886367 3 20.55170596417864 21.08997675845206 40.464323359915674 17.893993917453624 4 21.933670868577256 23.65470101346973 36.866905418131864 17.544722699821154 5 19.79851565132494 29.580917738744265 34.777326098789544 15.843240511141254 6 75.65264253808071 1.740632100984094 21.156072610397352 1.4506527505378388 7 71.83350109295755 7.347061542582145 18.984575474550937 1.8348618899093665 8 70.43063823537035 4.479343966269515 22.439595735305552 2.6504220630545787 9 32.926318245047135 32.167781944168446 26.358744956411297 8.547154854373126 10 19.6708059373947 22.568169447300438 45.6129418270103 12.148082788294554 11 19.738629785469282 20.63529777693298 44.380232588279 15.245839849318738 12 19.099379217390553 21.928864879342672 44.29269878435472 14.679057118912054 13 15.65283693764526 26.19361332630615 42.72745829049343 15.426091445555162 14 14.748068964325519 24.229043726942052 46.1707605774963 14.852126731236122 15 16.94230004924789 25.371735167313226 43.571584399650945 14.114380383787942 16 18.21394320076723 23.429845517146042 41.286957517215164 17.06925376487157 17 16.65556069154405 23.156984128355553 43.50786454238342 16.67959063771697 18 18.468552630442108 25.21707951374189 41.78062441140132 14.533743444414684 19 19.315594733067798 25.55009676778324 40.21030792891024 14.924000570238722 20 17.13362162068757 26.606766400843263 42.03787983514917 14.221732143319999 21 17.28897927268643 24.070230082684617 41.900774142265924 16.740016502363034 22 15.62680899594785 25.8766880362188 41.19456372417726 17.301939243656093 23 14.24009210219369 24.665902748377842 44.27450082511815 16.819504324310312 24 15.91614034784562 25.30531531609369 42.53997071046561 16.23857362559508 25 14.635965215437919 27.198767074761754 41.04422806092914 17.121039648871186 26 14.028952575146231 27.757611822949517 41.332209415850905 16.881226186053343 27 14.686779101614814 26.78210400808702 42.03458584252771 16.496531047770453 28 15.166730026524741 25.825604150646704 41.67975263735409 17.327913185474465 29 15.230341884034178 26.70223818698646 41.466507115024065 16.600912813955297 30 16.76712444164125 27.54506829904701 38.990936660301884 16.69687059900986 31 17.374029082174854 27.45893849197778 39.235232113080066 15.9318003127673 32 17.762234212595363 28.1137410252201 38.407845966425036 15.716178795759497 33 14.948570515202045 28.162880915146747 40.33396765191246 16.554580917738747 34 15.300433727028452 29.394510156297248 37.85342920831857 17.451626908355724 35 18.202981225322056 28.803913479233806 36.57843806429874 16.4146672311454 36 16.715932556311074 29.39407815726493 37.44265212845923 16.447337157964768 37 16.016742122497647 30.675981285801917 36.28694671723935 17.020329874461083 38 15.90604237046509 29.444784043683743 36.532862166388746 18.11631141946242 39 17.510000777598258 27.966267355561126 37.20235266673003 17.32137920011059 40 15.317767688200378 27.966915354109606 37.934645026395145 18.780671931294872 41 16.71155856610881 29.1611226790852 34.93387174812728 19.193447006678703 42 16.02149411185319 28.72302166043148 35.908569564804175 19.346914662911153 43 16.801684364227025 29.062680899594785 36.63432793910542 17.501306797072775 44 16.911466118315897 29.81700520990833 35.20819113365186 18.063337538123914 45 16.22275166103628 29.943148927346403 35.35993079375503 18.474168617862297 46 16.00772414269792 29.47064998574403 35.30274492185138 19.218880949706673 47 15.957990254101832 28.983139077768467 36.600092015793884 18.45877865233582 48 16.782838406441968 27.807021712271364 36.423080412299875 18.98705946898679 49 16.046280056332673 28.900303263320694 36.322370637889776 18.731046042456864 50 16.135811855781444 27.805347716021117 36.5397741509059 19.51906627729154 51 15.665850908493963 27.547552293482862 36.516824202313785 20.269772595709384 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1291.0 1 10935.0 2 20579.0 3 79308.5 4 138038.0 5 83890.0 6 29742.0 7 28348.0 8 26954.0 9 29834.0 10 32714.0 11 35738.0 12 38762.0 13 38000.5 14 37239.0 15 34808.0 16 32377.0 17 29933.0 18 27489.0 19 25481.5 20 23474.0 21 22716.0 22 21958.0 23 22560.5 24 23163.0 25 24162.5 26 27572.5 27 29983.0 28 32364.5 29 34746.0 30 38088.0 31 41430.0 32 44493.5 33 47557.0 34 52366.5 35 57176.0 36 62019.5 37 66863.0 38 71130.5 39 75398.0 40 81376.5 41 87355.0 42 98121.5 43 108888.0 44 119725.5 45 130563.0 46 137661.5 47 144760.0 48 135567.0 49 126374.0 50 112866.0 51 99358.0 52 86313.0 53 73268.0 54 65668.0 55 58068.0 56 51918.5 57 45769.0 58 41611.0 59 37453.0 60 33738.5 61 30024.0 62 27806.5 63 25589.0 64 22801.5 65 20014.0 66 16228.0 67 12442.0 68 9597.0 69 6752.0 70 5528.0 71 4304.0 72 3913.5 73 3523.0 74 2994.5 75 1899.0 76 1332.0 77 1018.0 78 704.0 79 565.0 80 426.0 81 304.5 82 183.0 83 133.0 84 83.0 85 56.5 86 30.0 87 21.5 88 13.0 89 8.0 90 3.0 91 4.5 92 6.0 93 8.0 94 10.0 95 5.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1851856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.0421335870713 #Duplication Level Percentage of deduplicated Percentage of total 1 77.2449404231886 29.38562342504304 2 9.756612020769463 7.4232467570267495 3 3.476500895814684 3.9676053448246575 4 1.7893906615765645 2.7228895434861418 5 1.1564859134121703 2.1997595804795975 6 0.8572438542059727 1.9566831131039693 7 0.6489123367145834 1.7280206859716338 8 0.5177052230297958 1.5755689002579225 9 0.42837006228249486 1.4666500020647448 >10 3.795431866531528 29.61134774228691 >50 0.27108627205644104 6.753547250919645 >100 0.052593087023524235 3.268177266964259 >500 0.003397806814551113 0.9135859330371483 >1k 0.001034115117472078 0.8463146263291348 >5k 0.0 0.0 >10k+ 2.954614621348794E-4 6.180979828204457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 99172 5.355276004181751 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10810 0.5837386924253289 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4353 0.23506147346229944 No Hit CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 2667 0.14401767740040264 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 2521 0.13613369506052306 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCC 2009 0.10848575699190434 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.17971159744602172 0.0 2 0.0 0.0 0.0 0.5238528265696685 0.0 3 0.0 0.0 0.0 0.8213921600815615 0.0 4 0.0 0.0 0.0 1.0170337218444632 0.0 5 0.0 0.0 0.0 1.9637056012994532 0.0 6 0.0 0.0 0.0 2.2489869622692047 0.0 7 0.0 0.0 0.0 3.021725231335482 0.0 8 0.0 0.0 0.0 3.9205532179607916 0.0 9 0.0 0.0 0.0 4.622605645363354 0.0 10 0.0 0.0 0.0 5.137170492738096 0.0 11 0.0 0.0 0.0 5.801099005538227 0.0 12 0.0 0.0 0.0 6.342825792070226 0.0 13 0.0 0.0 0.0 6.593601230333244 0.0 14 0.0 0.0 0.0 6.779684813506018 0.0 15 0.0 0.0 0.0 7.302457642494881 0.0 16 0.0 0.0 0.0 7.962876163157395 0.0 17 0.0 0.0 0.0 8.785942319489205 0.0 18 0.0 0.0 0.0 9.280041212707683 0.0 19 0.0 0.0 0.0 9.812804019318996 0.0 20 2.159995161610838E-4 0.0 0.0 10.344918827381827 0.0 21 2.159995161610838E-4 0.0 0.0 10.898363587665564 0.0 22 2.6999939520135476E-4 0.0 0.0 11.442304369238213 0.0 23 2.6999939520135476E-4 0.0 0.0 11.877813393697998 0.0 24 4.8599891136243855E-4 0.0 0.0 12.250898557987231 0.0 25 4.8599891136243855E-4 0.0 0.0 12.636187694939563 0.0 26 4.8599891136243855E-4 0.0 0.0 13.051662764275408 0.0 27 5.939986694429804E-4 0.0 0.0 13.451693868205735 0.0 28 6.479985484832514E-4 0.0 0.0 13.879588909720843 0.0 29 6.479985484832514E-4 0.0 0.0 14.356893840557797 0.0 30 6.479985484832514E-4 0.0 0.0 14.804930836954926 0.0 31 6.479985484832514E-4 0.0 0.0 15.226993891533683 0.0 32 6.479985484832514E-4 0.0 0.0 15.638094970667266 0.0 33 6.479985484832514E-4 0.0 0.0 16.05562203540664 0.0 34 6.479985484832514E-4 0.0 0.0 16.52191099091938 0.0 35 6.479985484832514E-4 0.0 0.0 16.95812201380669 0.0 36 6.479985484832514E-4 0.0 0.0 17.437694939563336 0.0 37 6.479985484832514E-4 0.0 0.0 17.912083876932115 0.0 38 6.479985484832514E-4 0.0 0.0 18.426378724911658 0.0 39 7.019984275235223E-4 0.0 0.0 18.928037601195772 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTCGT 30 2.1662236E-6 45.000004 33 CAACGAT 25 3.8917333E-5 45.0 34 CCCATCG 25 3.8917333E-5 45.0 28 CGTTTTT 27100 0.0 44.46863 1 CGGTCTA 155 0.0 43.54839 30 CGTTTTA 1440 0.0 43.125004 1 CTCGCGC 105 0.0 42.857143 32 TACGCGG 290 0.0 41.89655 1 CTAGCGG 355 0.0 41.830982 1 AGTACGG 140 0.0 41.785713 1 GCGATTG 260 0.0 41.538464 8 GCGATCG 65 0.0 41.538464 8 ACTGCGG 245 0.0 41.32653 1 AATACGG 55 6.184564E-11 40.909092 1 ACGGTCT 160 0.0 40.78125 29 CTTACGG 105 0.0 40.714287 1 CGACGGT 155 0.0 40.645164 27 ACGCGAG 45 1.929402E-8 40.000004 2 CGGGATC 980 0.0 39.94898 5 GTAGCGG 335 0.0 39.626865 1 >>END_MODULE