##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043451_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1193771 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52696371414618 31.0 31.0 33.0 30.0 34.0 2 30.545086955538373 31.0 31.0 34.0 26.0 34.0 3 31.46730235530935 31.0 31.0 34.0 28.0 34.0 4 35.08303937689892 37.0 35.0 37.0 32.0 37.0 5 35.39573419022577 37.0 35.0 37.0 33.0 37.0 6 35.83490887280726 37.0 35.0 37.0 35.0 37.0 7 33.73915935300824 37.0 35.0 37.0 32.0 37.0 8 34.77511013418822 37.0 35.0 37.0 31.0 37.0 9 36.75418149712131 39.0 37.0 39.0 32.0 39.0 10 36.727994732658104 39.0 35.0 39.0 32.0 39.0 11 36.513757663739526 39.0 35.0 39.0 32.0 39.0 12 36.46732413503092 39.0 35.0 39.0 32.0 39.0 13 36.50352370764577 39.0 35.0 39.0 32.0 39.0 14 37.86952355183699 40.0 36.0 41.0 33.0 41.0 15 38.01379661593388 40.0 36.0 41.0 33.0 41.0 16 37.97350161798201 40.0 36.0 41.0 33.0 41.0 17 37.93139136400532 40.0 36.0 41.0 33.0 41.0 18 37.60639184567224 39.0 36.0 41.0 33.0 41.0 19 37.273596862379804 38.0 35.0 41.0 33.0 41.0 20 36.92529471732853 38.0 35.0 41.0 32.0 41.0 21 36.82691571499056 38.0 35.0 41.0 32.0 41.0 22 36.735934278852476 38.0 35.0 40.0 32.0 41.0 23 36.64063291870887 38.0 35.0 40.0 32.0 41.0 24 36.4587420870502 37.0 35.0 40.0 32.0 41.0 25 36.350376244690146 37.0 35.0 40.0 32.0 41.0 26 36.06633516813526 37.0 35.0 40.0 31.0 41.0 27 35.95482634441614 36.0 35.0 40.0 31.0 41.0 28 35.852614948763204 36.0 35.0 40.0 31.0 41.0 29 35.775291911095174 36.0 35.0 40.0 31.0 41.0 30 35.586100684302096 36.0 35.0 40.0 30.0 41.0 31 35.065328274853385 36.0 34.0 40.0 27.0 41.0 32 34.846906148666704 36.0 34.0 40.0 25.0 41.0 33 34.642827644497984 36.0 34.0 40.0 24.0 41.0 34 34.40274558520856 36.0 34.0 40.0 22.0 41.0 35 34.16425512095704 36.0 34.0 40.0 21.0 41.0 36 33.98320364626046 36.0 33.0 40.0 20.0 41.0 37 33.89379537616511 36.0 33.0 40.0 20.0 41.0 38 33.78177556667066 35.0 33.0 40.0 18.0 41.0 39 33.66640419309901 35.0 33.0 40.0 18.0 41.0 40 33.59526575867566 35.0 33.0 40.0 18.0 41.0 41 33.51698357557689 35.0 33.0 40.0 18.0 41.0 42 33.42709196319897 35.0 33.0 40.0 18.0 41.0 43 33.27857352875887 35.0 33.0 40.0 17.0 41.0 44 33.09176215538826 35.0 33.0 40.0 16.0 41.0 45 32.91981963039812 35.0 33.0 40.0 15.0 41.0 46 32.929000620722064 35.0 33.0 40.0 15.0 41.0 47 32.90543161125542 35.0 33.0 40.0 15.0 41.0 48 32.836574183825874 35.0 33.0 40.0 15.0 41.0 49 32.762632866772606 35.0 33.0 40.0 15.0 41.0 50 32.64736033962963 35.0 33.0 40.0 15.0 41.0 51 32.240087085379024 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 1.0 9 1.0 10 1.0 11 2.0 12 5.0 13 20.0 14 24.0 15 80.0 16 170.0 17 375.0 18 795.0 19 1481.0 20 2459.0 21 4001.0 22 6120.0 23 9507.0 24 15508.0 25 23411.0 26 28808.0 27 31436.0 28 30719.0 29 30433.0 30 32510.0 31 37509.0 32 45066.0 33 58566.0 34 95606.0 35 135306.0 36 136881.0 37 108137.0 38 137049.0 39 221678.0 40 105.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.98150817870429 17.432405377580793 25.22502221950441 32.36106422421051 2 32.98404802931215 19.95659133954502 28.38735402351037 18.67200660763245 3 20.442949275866145 20.850732678210477 39.96310850238446 18.743209543538917 4 21.50135997607581 24.639231477393906 37.36378250099894 16.495626045531345 5 19.281252434512147 29.630305979957626 35.13529814344627 15.95314344208395 6 75.85156617140139 1.911673176848826 20.77316336215237 1.4635972895974185 7 72.36278984830425 7.348980667146379 18.843563799087097 1.444665685462287 8 71.39995861852901 4.09374997382245 21.714466174835877 2.7918252328126583 9 37.65152613022095 23.04001353693464 27.759511665135108 11.5489486677093 10 27.657817119028692 25.40093535527333 36.189017826702106 10.75222969899587 11 25.413835651896388 22.476337589035083 39.46318012416117 12.646646634907366 12 18.732319682753225 28.362977488982395 38.16988350362004 14.734819324644342 13 14.526404142838114 30.76544831462651 37.99908022560441 16.70906731693097 14 13.23495042181457 25.266906299449392 44.91874907331473 16.57939420542131 15 15.99511129018882 23.396530825426318 44.01162366986633 16.59673421451853 16 16.99404659687662 24.855018257270448 37.2806844863881 20.87025065946484 17 17.72668292327423 24.440868474774476 41.70305695145887 16.12939165049243 18 20.568433979381307 27.08827739993684 36.8808590592333 15.462429561448552 19 21.31011726704703 26.578213074366857 37.04462581181818 15.06704384676793 20 16.70194702334032 29.470811403527144 37.79619374235092 16.031047830781617 21 17.288826751529395 25.704259862234885 37.74124182946311 19.265671556772617 22 14.779132681226132 29.663645707593833 37.12965049410649 18.427571117073544 23 14.49582876447828 26.172775180499443 44.60445093740759 14.726945117614685 24 15.141597509069998 27.50594544514819 41.28765064656454 16.06480639921727 25 14.956302339393401 30.993046405047536 37.84176362133106 16.208887634228006 26 14.18119555593158 31.540806402567995 37.522188091350856 16.75580995014957 27 14.105217834911384 29.34247858257572 40.8382344687549 15.714069113758 28 13.601938730292492 27.374596970440727 40.29432780658937 18.729136492677405 29 14.412982054347106 31.075893115178705 38.956298988667 15.55482584180718 30 18.124246610111992 30.422669004356784 36.20811696715702 15.24496741837421 31 17.911140411351926 29.424152538468434 36.008748746618906 16.655958303560734 32 16.849043912107096 32.44298948458289 34.857187852611595 15.850778750698415 33 14.368501161445538 30.365120278512375 35.98470728473049 19.281671275311595 34 14.277780244284708 31.583193091472317 36.485808417192246 17.653218247050734 35 19.355638560494434 30.48909715514952 34.19751359347815 15.957750690877898 36 15.138163014514507 33.72548001249821 34.75993301897935 16.37642395400793 37 16.13307744952759 32.7099586101522 34.86941800395553 16.28754593636468 38 15.788120167100725 34.767555921529336 33.355140977624686 16.08918293374525 39 17.98259465173806 31.24812045191247 33.64355475212582 17.125730144223642 40 14.818336180054633 31.189063899190046 34.579328866256596 19.413271054498725 41 15.906903417824692 31.330967162043642 32.82924446983551 19.932884950296163 42 15.606343260139507 30.90450346004384 34.295354804229625 19.193798475587027 43 15.805543944357838 31.614522383271165 34.541716962466005 18.038216709904997 44 14.152714381568995 35.94843567149814 32.42615208444501 17.472697862487866 45 16.44620283119627 33.317445305674205 33.625041988790144 16.611309874339383 46 15.561778599078046 33.28728876811382 32.46183732055813 18.689095312250004 47 15.150141861378774 31.5082205883708 34.85534495309402 18.486292597156407 48 15.286683961999412 30.480720339160527 35.608336942344884 18.624258756495173 49 15.764078705212306 32.573081436892 33.96798883537965 17.694851022516044 50 14.813310090461234 32.37220538947587 34.167105751438086 18.647378768624804 51 14.396312190529004 31.28899931393877 35.37110551353651 18.94358298199571 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1033.0 1 7546.5 2 14060.0 3 55260.5 4 96461.0 5 57920.0 6 19379.0 7 19121.5 8 18864.0 9 21950.0 10 25036.0 11 27302.0 12 29568.0 13 28837.5 14 28107.0 15 25122.5 16 22138.0 17 19054.5 18 15971.0 19 14289.0 20 12607.0 21 11807.5 22 11008.0 23 10254.5 24 9501.0 25 9879.5 26 11266.0 27 12274.0 28 13574.5 29 14875.0 30 16227.5 31 17580.0 32 19287.5 33 20995.0 34 27462.5 35 33930.0 36 38449.5 37 42969.0 38 44734.0 39 46499.0 40 52565.5 41 58632.0 42 67608.5 43 76585.0 44 84254.0 45 91923.0 46 91397.0 47 90871.0 48 84966.0 49 79061.0 50 72632.5 51 66204.0 52 61148.0 53 56092.0 54 50520.0 55 44948.0 56 40869.5 57 36791.0 58 33171.0 59 29551.0 60 24636.0 61 19721.0 62 16573.0 63 13425.0 64 10778.0 65 8131.0 66 6823.0 67 5515.0 68 4581.0 69 3647.0 70 3126.0 71 2605.0 72 2552.5 73 2500.0 74 2304.0 75 1565.0 76 1022.0 77 903.5 78 785.0 79 525.0 80 265.0 81 200.0 82 135.0 83 95.0 84 55.0 85 49.0 86 43.0 87 32.5 88 22.0 89 14.5 90 7.0 91 6.5 92 6.0 93 5.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1193771.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.46737606155482 #Duplication Level Percentage of deduplicated Percentage of total 1 78.43237181420169 27.817904265339845 2 9.134874296001968 6.479800438626652 3 3.341450288796709 3.5553742195123155 4 1.7760791294295537 2.5197146559422756 5 1.1954647309710231 2.119999859083737 6 0.8734856174165143 1.8588145726362546 7 0.5982944744553036 1.485395458473959 8 0.4664776834351724 1.3235791538174546 9 0.38008634869494434 1.2132598918524162 >10 3.141989982601865 24.133259535801386 >50 0.5454887173748189 13.161415343033958 >100 0.10953591984609876 5.83713986926124 >500 0.003178497670403794 0.7494141120307264 >1k 7.334994624008755E-4 0.5033093619794418 >5k 2.4449982080029185E-4 0.6894054837588839 >10k+ 2.4449982080029185E-4 6.552213778849528 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 75558 6.3293546249657595 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7950 0.6659568711251991 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3200 0.26805811164787885 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1505 0.12607108063439304 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08393569620974208 0.0 2 0.0 0.0 0.0 0.26428854445283056 0.0 3 0.0 0.0 0.0 0.4370184901459325 0.0 4 0.0 0.0 0.0 0.5485976791193621 0.0 5 0.0 0.0 0.0 1.196795700347889 0.0 6 0.0 0.0 0.0 1.4329381430776924 0.0 7 0.0 0.0 0.0 1.9767610370833266 0.0 8 0.0 0.0 0.0 2.6015039735426644 0.0 9 0.0 0.0 0.0 3.084176110828626 0.0 10 0.0 0.0 0.0 3.4000658417736735 0.0 11 0.0 0.0 0.0 3.7527297949104144 0.0 12 0.0 0.0 0.0 4.056054301871967 0.0 13 0.0 0.0 0.0 4.202564813519511 0.0 14 0.0 0.0 0.0 4.31439530697261 0.0 15 0.0 0.0 0.0 4.666472882990122 0.0 16 0.0 0.0 0.0 5.101816009938254 0.0 17 0.0 0.0 0.0 5.594121485611562 0.0 18 0.0 0.0 0.0 5.870305108768767 0.0 19 0.0 0.0 0.0 6.1809174456407465 0.0 20 0.0 0.0 0.0 6.557957933305467 0.0 21 0.0 0.0 0.0 6.937343929447105 0.0 22 0.0 0.0 0.0 7.338928487959584 0.0 23 8.376815988996214E-5 0.0 0.0 7.65573966866342 0.0 24 2.5130447966988643E-4 0.0 0.0 7.952446490993666 0.0 25 2.5130447966988643E-4 0.0 0.0 8.244294760050295 0.0 26 2.5130447966988643E-4 0.0 0.0 8.545776367494268 0.0 27 2.5130447966988643E-4 0.0 0.0 8.846504061499232 0.0 28 3.3507263955984856E-4 0.0 0.0 9.158791761569011 0.0 29 3.3507263955984856E-4 0.0 0.0 9.529130796442534 0.0 30 3.3507263955984856E-4 0.0 0.0 9.872915324630938 0.0 31 3.3507263955984856E-4 0.0 0.0 10.187799837657305 0.0 32 3.3507263955984856E-4 0.0 0.0 10.522286100097926 0.0 33 3.3507263955984856E-4 0.0 0.0 10.862384829251171 0.0 34 4.1884079944981073E-4 0.0 0.0 11.26371808328398 0.0 35 4.1884079944981073E-4 0.0 0.0 11.607000002513045 0.0 36 4.1884079944981073E-4 0.0 0.0 11.95111960334101 0.0 37 4.1884079944981073E-4 0.0 0.0 12.313416894865096 0.0 38 4.1884079944981073E-4 0.0 0.0 12.6822481028606 0.0 39 4.1884079944981073E-4 0.0 0.0 13.05736192284785 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGATGT 30 2.1655724E-6 45.000004 5 CGTAGGC 35 1.2119744E-7 45.000004 2 GACGGAC 30 2.1655724E-6 45.000004 34 CGTAAAT 35 1.2119744E-7 45.000004 15 CGGTCTA 140 0.0 45.000004 30 ACATCGC 35 1.2119744E-7 45.000004 17 CTATGCG 20 7.033396E-4 45.0 23 TCCGCAT 20 7.033396E-4 45.0 11 CGAGTAC 20 7.033396E-4 45.0 5 TTAGCGA 40 6.8157533E-9 45.0 1 GGCAACG 45 3.8562575E-10 45.0 7 GTGATCG 20 7.033396E-4 45.0 19 CTAAGCG 25 3.8908962E-5 45.0 17 TATGCGC 20 7.033396E-4 45.0 24 CGGATCG 20 7.033396E-4 45.0 5 AGCGATA 20 7.033396E-4 45.0 7 CTCGCGA 20 7.033396E-4 45.0 1 CGTCCAA 20 7.033396E-4 45.0 9 CGTCATG 20 7.033396E-4 45.0 17 GGTTACG 20 7.033396E-4 45.0 26 >>END_MODULE