##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043449_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 606906 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.588259137329338 31.0 31.0 33.0 30.0 34.0 2 30.691322873723443 31.0 31.0 34.0 26.0 34.0 3 31.556124012614802 31.0 31.0 34.0 28.0 34.0 4 35.14759287270187 37.0 35.0 37.0 32.0 37.0 5 35.45089025318583 37.0 35.0 37.0 33.0 37.0 6 35.8385384227541 37.0 35.0 37.0 35.0 37.0 7 33.99865547547726 37.0 35.0 37.0 32.0 37.0 8 34.90816535015307 37.0 35.0 37.0 32.0 37.0 9 36.84595143234702 39.0 37.0 39.0 32.0 39.0 10 36.780389384847076 39.0 35.0 39.0 32.0 39.0 11 36.286464460723735 38.0 35.0 39.0 32.0 39.0 12 36.02532187851166 38.0 35.0 39.0 32.0 39.0 13 36.12089516333666 38.0 35.0 39.0 32.0 39.0 14 37.48288367556096 40.0 35.0 41.0 33.0 41.0 15 37.69311227768386 40.0 35.0 41.0 33.0 41.0 16 37.64090485182219 40.0 35.0 41.0 33.0 41.0 17 37.66903111849282 39.0 36.0 41.0 33.0 41.0 18 37.41345117695327 39.0 36.0 41.0 33.0 41.0 19 37.13260537875717 38.0 35.0 41.0 33.0 41.0 20 36.836368399719234 38.0 35.0 40.0 33.0 41.0 21 36.759745331237454 38.0 35.0 40.0 32.0 41.0 22 36.693886697445734 37.0 35.0 40.0 32.0 41.0 23 36.61843349711487 37.0 35.0 40.0 32.0 41.0 24 36.462766886470064 37.0 35.0 40.0 32.0 41.0 25 36.38033896517747 36.0 35.0 40.0 32.0 41.0 26 36.12823567405825 36.0 35.0 40.0 31.0 41.0 27 36.10597852056167 36.0 35.0 40.0 31.0 41.0 28 36.02271356684561 36.0 35.0 40.0 31.0 41.0 29 35.99527603945257 36.0 35.0 40.0 31.0 41.0 30 35.82354598570454 36.0 35.0 40.0 31.0 41.0 31 35.45671982152096 36.0 35.0 40.0 30.0 41.0 32 35.32629435200838 36.0 35.0 40.0 29.0 41.0 33 35.234822196518074 36.0 35.0 40.0 29.0 41.0 34 35.08836788563632 36.0 35.0 40.0 28.0 41.0 35 34.85048261180479 36.0 35.0 40.0 25.0 41.0 36 34.67588720493783 36.0 34.0 40.0 25.0 41.0 37 34.62395000214201 35.0 34.0 40.0 25.0 41.0 38 34.55842749948098 35.0 34.0 40.0 24.0 41.0 39 34.34963075006673 35.0 34.0 40.0 23.0 41.0 40 34.343179998220485 35.0 34.0 40.0 23.0 41.0 41 34.27964297601276 35.0 34.0 40.0 23.0 41.0 42 34.170270190111815 35.0 34.0 40.0 23.0 41.0 43 33.97541629181455 35.0 34.0 40.0 22.0 41.0 44 33.78083755968799 35.0 33.0 40.0 21.0 41.0 45 33.619712113572774 35.0 33.0 40.0 20.0 41.0 46 33.61380510326146 35.0 33.0 40.0 21.0 41.0 47 33.621163738700886 35.0 33.0 40.0 22.0 41.0 48 33.58980962455471 35.0 33.0 40.0 20.0 41.0 49 33.463740678128076 35.0 33.0 40.0 20.0 41.0 50 33.32718411088373 35.0 33.0 40.0 20.0 41.0 51 32.81058846015693 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 6.0 14 11.0 15 35.0 16 46.0 17 130.0 18 254.0 19 494.0 20 898.0 21 1485.0 22 2399.0 23 3806.0 24 6068.0 25 9170.0 26 11467.0 27 12719.0 28 12681.0 29 13660.0 30 15382.0 31 18517.0 32 23432.0 33 31773.0 34 59299.0 35 88156.0 36 60447.0 37 51140.0 38 68057.0 39 115289.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.921137705015276 18.622488490804177 24.815375033365957 29.64099877081459 2 30.518894194488112 21.871426547109436 29.09544476409856 18.514234494303896 3 22.318612767051242 21.614055553907853 37.53035890236709 18.536972776673817 4 22.957097145192172 25.280521200976757 33.65068066553964 18.11170098829143 5 18.897489891350556 31.83639641064679 32.79766553634336 16.468448161659303 6 79.8856824615344 2.1891363736723646 16.554128645951764 1.3710525188414682 7 76.72291920000791 6.62260712532089 14.863586782796675 1.790886891874524 8 76.00831100697637 3.670749671283527 17.674565748237782 2.6463735735023213 9 41.704316648706715 24.144430933291154 23.762658467703403 10.388593950298729 10 33.95418730412947 21.085802414212417 34.470576992153646 10.48943328950447 11 33.45905296701631 20.071971606805665 33.2896692403766 13.179306185801426 12 16.721535130646263 36.50697142555849 33.08008159418427 13.691411849610976 13 12.199253261625358 38.352726781412606 34.17267253907524 15.27534741788679 14 9.91619789555549 24.05479596510827 49.98846608865294 16.0405400506833 15 12.123458987058951 19.877872355850823 49.39150379136143 18.607164865728794 16 12.515611972859059 22.104246786157987 35.40268179915835 29.9774594418246 17 15.507673346449039 22.532649207620288 43.10519256688845 18.854484879042225 18 20.8781920099653 25.126625869574532 34.64259704138697 19.3525850790732 19 22.741413003002112 23.95642817833404 35.27795078644798 18.024208032215864 20 15.26101241378401 29.97350495793418 35.92384982188345 18.841632806398355 21 17.788916240735798 24.679110109308525 32.608674160413635 24.92329948954204 22 12.495510013082752 30.046003829258566 33.81166111391221 23.646825043746478 23 12.338154508276405 23.105884601569272 49.50305319110373 15.052907699050595 24 13.12460249198393 25.607754742909115 42.961677755698574 18.305965009408375 25 12.552685259331758 33.08354176758839 35.43514152109223 18.928631451987624 26 11.77167469097356 35.40383519029306 34.62282462193486 18.201665496798515 27 12.524509561612508 28.690769245978785 41.91522245619585 16.869498736212858 28 11.304056970931248 24.912424658843378 41.46457606284993 22.31894230737544 29 13.234009879618919 32.811671000121926 36.58754403482582 17.36677508543333 30 21.024343143748787 30.31045993943049 32.871976879450855 15.793220037369874 31 22.460644646782203 26.74862334529565 34.33579499955512 16.45493700836703 32 20.378938418799617 30.56255828744484 31.788118753151227 17.27038454060431 33 14.93872197671468 28.55944742678438 33.87608624729365 22.62574434920729 34 16.452300685773412 27.45021469552122 35.66911515127549 20.42836946742988 35 25.25283981374381 27.14308311336517 31.491038150883334 16.113038922007693 36 15.35361324488471 32.841823939786394 34.16657604307751 17.637986772251388 37 17.633702748036765 30.79455467568289 34.10132705888556 17.470415517394784 38 17.518363634566146 32.143198452478636 32.091625391741054 18.24681252121416 39 21.126500644251333 26.31774937140183 32.27929860637397 20.276451377972865 40 13.906272140990533 25.880284591023983 35.751994542812234 24.461448725173256 41 17.311906621453733 27.50673086112182 30.469792686182046 24.7115698312424 42 17.585589860703305 26.452366593838256 33.55445489087272 22.40758865458572 43 16.580162331563702 29.581022431809867 34.14169574860028 19.697119488026154 44 13.627810567040036 37.71951504845891 29.302890398183575 19.349783986317487 45 18.088303625273106 32.024234395441795 32.278474755563465 17.60898722372163 46 17.63831631257559 29.651708831351147 31.092788669085493 21.617186186987773 47 16.944469159968758 27.475424530322652 35.99025219721011 19.589854112498475 48 17.729269442055276 24.762978121817877 36.38784259835955 21.1199098377673 49 17.56005048557767 30.822565603240044 32.30615614279641 19.311227768385876 50 15.638006544670837 30.914836894016535 31.910707753754288 21.536448807558337 51 15.84660556989056 26.126945523689006 36.50680665539639 21.519642251024045 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 781.0 1 3404.0 2 6027.0 3 22957.0 4 39887.0 5 23079.0 6 6271.0 7 6436.0 8 6601.0 9 7469.5 10 8338.0 11 9243.0 12 10148.0 13 10010.5 14 9873.0 15 8746.0 16 7619.0 17 6586.0 18 5553.0 19 4989.5 20 4426.0 21 4203.0 22 3980.0 23 3567.5 24 3155.0 25 3278.0 26 4098.5 27 4796.0 28 4975.5 29 5155.0 30 7074.5 31 8994.0 32 10685.5 33 12377.0 34 16210.0 35 20043.0 36 20174.5 37 20306.0 38 21311.5 39 22317.0 40 28537.5 41 34758.0 42 43171.5 43 51585.0 44 53444.5 45 55304.0 46 53672.0 47 52040.0 48 50869.0 49 49698.0 50 43806.5 51 37915.0 52 33238.0 53 28561.0 54 25222.0 55 21883.0 56 19642.0 57 17401.0 58 15715.0 59 14029.0 60 11985.0 61 9941.0 62 8538.0 63 7135.0 64 6187.0 65 5239.0 66 4284.0 67 3329.0 68 2616.0 69 1903.0 70 1847.0 71 1791.0 72 1950.5 73 2110.0 74 1585.0 75 822.5 76 585.0 77 443.5 78 302.0 79 218.0 80 134.0 81 107.0 82 80.0 83 65.5 84 51.0 85 34.0 86 17.0 87 10.5 88 4.0 89 2.0 90 0.0 91 1.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 606906.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.892918654596752 #Duplication Level Percentage of deduplicated Percentage of total 1 78.11674710034147 24.132543137325555 2 9.524270298009197 5.884650151215802 3 3.551636689790475 3.291612700451353 4 1.8822099886662895 2.3258784028294865 5 1.1504152138139483 1.7769841809682416 6 0.7774384025226935 1.441040479685593 7 0.5145632597540439 1.1127452648358074 8 0.38442753914210637 0.9500870956243122 9 0.2930306280798647 0.8147314220918991 >10 2.604363872896167 18.700126740449246 >50 0.8971597801948408 19.38893056633258 >100 0.2972517344019045 12.91025917410334 >500 0.004323661591300429 0.7616859235458515 >1k 0.001621373096737661 1.0059530226575528 >5k 0.0 0.0 >10k+ 5.404576989125536E-4 5.502771737883423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32958 5.430495002520983 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3425 0.5643378051955328 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1332 0.21947385591837948 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1268 0.20892856554392278 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 697 0.11484480298431718 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 615 0.10133364969204456 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10759491585187822 0.0 2 0.0 0.0 0.0 0.3751816591037162 0.0 3 0.0 0.0 0.0 0.6200301199856321 0.0 4 0.0 0.0 0.0 0.7671698747417228 0.0 5 0.0 0.0 0.0 1.6712637541892814 0.0 6 0.0 0.0 0.0 1.874754904383875 0.0 7 0.0 0.0 0.0 2.5297162987348947 0.0 8 0.0 0.0 0.0 3.326544802654777 0.0 9 0.0 0.0 0.0 3.8725931198571115 0.0 10 0.0 0.0 0.0 4.297535367915295 0.0 11 0.0 0.0 0.0 4.750323773368528 0.0 12 0.0 0.0 0.0 5.137039343819306 0.0 13 0.0 0.0 0.0 5.302962897054898 0.0 14 0.0 0.0 0.0 5.430495002520983 0.0 15 0.0 0.0 0.0 5.916566980718596 0.0 16 0.0 0.0 0.0 6.493427318233795 0.0 17 0.0 0.0 0.0 7.213472926614665 0.0 18 0.0 0.0 0.0 7.516979565204497 0.0 19 0.0 0.0 0.0 7.875519437936023 0.0 20 0.0 0.0 0.0 8.253007879309152 0.0 21 0.0019772419452106257 0.0 0.0 8.643677933650352 0.0 22 0.0019772419452106257 0.0 0.0 9.064336157493912 0.0 23 0.0019772419452106257 0.0 0.0 9.366030324300633 0.0 24 0.005437415349329221 0.0 0.0 9.602969817401707 0.0 25 0.005602185511430107 0.0 0.0 9.82870493947992 0.0 26 0.005602185511430107 0.0 0.0 10.082121448791082 0.0 27 0.005602185511430107 0.0 0.0 10.33702088956115 0.0 28 0.005931725835631877 0.0 0.0 10.606090564271897 0.0 29 0.005931725835631877 0.0 0.0 10.948647731279639 0.0 30 0.006096495997732762 0.0 0.0 11.268960926403759 0.0 31 0.006096495997732762 0.0 0.0 11.52040019376971 0.0 32 0.006096495997732762 0.0 0.0 11.814020622633489 0.0 33 0.006096495997732762 0.0 0.0 12.079630123940117 0.0 34 0.006096495997732762 0.0 0.0 12.434050742619121 0.0 35 0.006096495997732762 0.0 0.0 12.691586505982805 0.0 36 0.006096495997732762 0.0 0.0 12.973013942851116 0.0 37 0.006096495997732762 0.0 0.0 13.258560633771951 0.0 38 0.006096495997732762 0.0 0.0 13.547732268259006 0.0 39 0.006096495997732762 0.0 0.0 13.854534310090854 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACAGTA 55 1.8189894E-12 45.000004 8 ACACAGG 55 1.8189894E-12 45.000004 1 ACGGGTC 55 1.8189894E-12 45.000004 4 CTTATGG 55 1.8189894E-12 45.000004 1 TGATTTG 35 1.2106648E-7 45.000004 28 GTCGTGG 35 1.2106648E-7 45.000004 1 TTGCGTG 35 1.2106648E-7 45.000004 13 ATGACGG 35 1.2106648E-7 45.000004 1 GCGATAG 55 1.8189894E-12 45.000004 8 AGGGCGT 35 1.2106648E-7 45.000004 5 AGTACGG 55 1.8189894E-12 45.000004 1 TCACGCA 20 7.030653E-4 45.0 24 CAGGTTG 20 7.030653E-4 45.0 5 GTCATCA 20 7.030653E-4 45.0 20 GTGCAGA 25 3.8886228E-5 45.0 1 GGTACTC 20 7.030653E-4 45.0 11 TACCCTC 20 7.030653E-4 45.0 31 ACAAATG 20 7.030653E-4 45.0 26 GTCGCAT 25 3.8886228E-5 45.0 9 CGTATTT 20 7.030653E-4 45.0 1 >>END_MODULE