##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043448_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3441304 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52841190432464 31.0 31.0 33.0 30.0 34.0 2 30.547670592310357 31.0 31.0 34.0 26.0 34.0 3 31.542689050429722 31.0 31.0 34.0 28.0 34.0 4 35.18604430181117 37.0 35.0 37.0 33.0 37.0 5 35.52444276936882 37.0 35.0 37.0 33.0 37.0 6 35.751765319192955 37.0 35.0 37.0 35.0 37.0 7 33.65208072288876 37.0 35.0 37.0 32.0 37.0 8 34.71178396328833 37.0 35.0 37.0 31.0 37.0 9 36.727505910550185 39.0 37.0 39.0 32.0 39.0 10 36.820846981260594 39.0 35.0 39.0 32.0 39.0 11 36.779051487459405 39.0 35.0 39.0 33.0 39.0 12 36.820019969174474 39.0 35.0 39.0 33.0 39.0 13 36.86527287330617 39.0 35.0 39.0 33.0 39.0 14 38.15351244760707 40.0 37.0 41.0 33.0 41.0 15 38.217003205761536 40.0 37.0 41.0 33.0 41.0 16 38.081238100441 40.0 37.0 41.0 33.0 41.0 17 38.03372733126745 40.0 37.0 41.0 33.0 41.0 18 37.77921131059622 39.0 36.0 41.0 33.0 41.0 19 37.51102895879004 39.0 36.0 41.0 33.0 41.0 20 37.22391715465998 39.0 35.0 41.0 33.0 41.0 21 37.11843475612733 39.0 35.0 41.0 33.0 41.0 22 37.03663001001946 38.0 35.0 41.0 32.0 41.0 23 36.972158228392495 38.0 35.0 40.0 32.0 41.0 24 36.817372426266324 38.0 35.0 40.0 32.0 41.0 25 36.71991954212705 38.0 35.0 40.0 32.0 41.0 26 36.458054853625256 38.0 35.0 40.0 31.0 41.0 27 36.32218658973459 38.0 35.0 40.0 31.0 41.0 28 36.1352016561164 38.0 35.0 40.0 31.0 41.0 29 36.073504694731994 38.0 35.0 40.0 30.0 41.0 30 35.88960027942896 38.0 35.0 40.0 30.0 41.0 31 35.59751855691912 38.0 35.0 40.0 29.0 41.0 32 35.440957265036744 38.0 35.0 40.0 27.0 41.0 33 35.16232974477117 38.0 34.0 40.0 25.0 41.0 34 34.94314626083601 38.0 34.0 40.0 24.0 41.0 35 34.741591559478614 38.0 34.0 40.0 23.0 41.0 36 34.59444995269235 37.0 34.0 40.0 23.0 41.0 37 34.44472676636531 37.0 34.0 40.0 22.0 41.0 38 34.29714985947187 37.0 34.0 40.0 21.0 41.0 39 34.16529083161499 37.0 34.0 40.0 21.0 41.0 40 34.04342656155922 36.0 33.0 40.0 21.0 41.0 41 33.92377046607914 36.0 33.0 40.0 20.0 41.0 42 33.80183674560573 36.0 33.0 40.0 20.0 41.0 43 33.6200730885734 36.0 33.0 40.0 18.0 41.0 44 33.399483161034304 35.0 33.0 40.0 18.0 41.0 45 33.18225155348089 35.0 33.0 40.0 18.0 41.0 46 33.16804560131857 35.0 33.0 40.0 18.0 41.0 47 33.126653152409666 35.0 33.0 40.0 18.0 41.0 48 33.019843640666444 35.0 33.0 39.0 18.0 41.0 49 32.971276295264815 35.0 33.0 39.0 18.0 41.0 50 32.89690826500652 35.0 33.0 39.0 18.0 41.0 51 32.47649466597546 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 4.0 11 11.0 12 25.0 13 32.0 14 74.0 15 159.0 16 367.0 17 790.0 18 1670.0 19 3162.0 20 5552.0 21 9273.0 22 14382.0 23 22098.0 24 34575.0 25 52796.0 26 72703.0 27 85655.0 28 90071.0 29 90314.0 30 94377.0 31 106998.0 32 127123.0 33 163883.0 34 271896.0 35 323498.0 36 354638.0 37 390440.0 38 499990.0 39 624433.0 40 311.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.22621773606749 16.471634008503752 22.155874633569137 32.14627362185962 2 34.9294627850373 19.47668674432715 25.626041756264485 19.967808714371063 3 26.02068866917889 20.449079767436995 34.60862510257739 18.921606460806718 4 22.445328863709804 23.26798213700388 32.39330207386502 21.893386925421293 5 20.61578982850687 32.657126484611645 30.98110483700365 15.745978849877837 6 78.54972998607505 2.2467645985359037 17.726536219991026 1.4769691953980235 7 73.82869981844091 7.706875068288068 16.775762908478878 1.688662204792137 8 72.46828527790629 4.050673814344795 20.14436969241892 3.3366712153300027 9 38.885521302390025 18.113221034817034 28.563213247071463 14.438044415721482 10 25.884780885385304 18.977980439972754 33.146359635765975 21.99087903887596 11 23.134805875912154 15.747170258715881 41.751876614213685 19.36614725115828 12 20.74251504662186 16.44001808616734 42.426272134051516 20.39119473315929 13 18.07329430936645 20.30352447793046 42.252558913714104 19.370622298988987 14 17.59588807033613 19.18034558992754 42.70419003958965 20.51957630014669 15 21.66884994757801 15.409769087531936 42.16314513335643 20.75823583153363 16 22.139950437392336 16.182760953406035 38.32768043741559 23.349608171786045 17 21.782353433465918 19.804876291080358 37.49012002426987 20.922650251183853 18 23.227793882783967 21.614306669797262 35.10201365528881 20.05588579212996 19 23.959347968095816 19.58969623142855 34.84339076117658 21.607565039299057 20 25.32107015247708 20.589840362839205 36.536963895081634 17.55212558960208 21 21.926891666647293 18.047373902450932 36.648578562079955 23.37715586882182 22 22.57222843433768 20.303117655400392 36.484280377438324 20.640373532823606 23 23.16334157052094 19.675564844024244 37.383852167666674 19.77724141778814 24 25.506958989964268 17.74243135741568 35.500786911008156 21.2498227416119 25 21.061231440175003 19.514317828358088 35.59046222013516 23.833988511331754 26 19.914514962932657 19.1626197511176 38.149608404256064 22.773256881693683 27 21.077475282625425 19.952814398262984 38.134991851925896 20.834718467185695 28 21.684745085002664 21.9773667191274 35.74214890634481 20.595739289525135 29 21.6075940980512 19.155500356841475 38.90891359786872 20.327991947238605 30 25.39057868761376 19.869473897104122 34.993508274770264 19.74643914051185 31 24.635777600583964 21.022496123562465 33.79506721870547 20.546659057148105 32 25.071542647787005 19.485694957492857 33.1455169319537 22.29724546276644 33 22.01996684977555 21.550609885090072 34.64474513149666 21.784678133637712 34 22.4487577964632 21.752422918754053 33.33646199231454 22.462357292468205 35 24.336617747226054 24.065209002168945 31.224326592477738 20.373846658127267 36 23.012817234397193 23.549299916543266 30.71789066005212 22.719992189007424 37 23.565049760207177 26.226192164365603 29.45377682413411 20.754981251293113 38 22.59393532219182 23.164794508128313 29.300579082812796 24.94069108686707 39 22.30622461718 21.936858818633866 34.036167685272794 21.720748878913344 40 21.345426036176985 22.04792136934139 34.12145512282553 22.485197471656093 41 20.952261119622094 26.12097042283971 30.325481271053068 22.601287186485123 42 20.65653019901758 21.92157391500431 31.566696810278895 25.855199075699208 43 21.699012932307056 21.30128579166502 34.29124541162303 22.70845586440489 44 23.638364991875175 22.326769154948238 32.62318586210344 21.41167999107315 45 24.110191950493185 22.034554343353566 32.73326041523795 21.121993290915302 46 22.374890448504402 23.45674779095366 31.924497225470343 22.243864535071587 47 21.12649739749816 25.642285598714903 32.34308855015424 20.888128453632692 48 22.119551193384833 24.771743501881847 32.22917824173627 20.87952706299705 49 21.03583409079814 21.989019278738525 34.34363834174488 22.631508288718464 50 20.4569837480211 22.735335210141272 35.211216445858895 21.596464595978734 51 20.16404246762274 21.140445598528927 34.17091311898048 24.52459881486785 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1383.0 1 16794.0 2 32205.0 3 126394.0 4 220583.0 5 135731.5 6 50880.0 7 45830.0 8 40780.0 9 39656.0 10 38532.0 11 37261.5 12 35991.0 13 34065.5 14 32140.0 15 29718.5 16 27297.0 17 25480.0 18 23663.0 19 22177.5 20 20692.0 21 20264.0 22 19836.0 23 19449.0 24 19062.0 25 19597.0 26 21657.5 27 23183.0 28 25339.0 29 27495.0 30 32958.5 31 38422.0 32 43531.0 33 48640.0 34 53541.0 35 58442.0 36 61984.0 37 65526.0 38 69135.0 39 72744.0 40 79907.5 41 87071.0 42 93926.0 43 100781.0 44 109221.5 45 117662.0 46 130301.0 47 142940.0 48 170945.5 49 198951.0 50 202509.0 51 206067.0 52 191259.5 53 176452.0 54 177325.0 55 178198.0 56 185039.0 57 191880.0 58 195138.0 59 198396.0 60 198093.0 61 197790.0 62 193217.5 63 188645.0 64 174378.0 65 160111.0 66 136924.0 67 113737.0 68 96821.5 69 79906.0 70 70067.0 71 60228.0 72 55959.5 73 51691.0 74 43690.0 75 27415.0 76 19141.0 77 14074.0 78 9007.0 79 6914.0 80 4821.0 81 3645.5 82 2470.0 83 1790.5 84 1111.0 85 854.5 86 598.0 87 400.0 88 202.0 89 139.5 90 77.0 91 53.5 92 30.0 93 23.0 94 16.0 95 12.0 96 8.0 97 4.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3441304.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.654413444783486 #Duplication Level Percentage of deduplicated Percentage of total 1 75.75379100671651 20.191728655027426 2 8.150094984811524 4.344720026788455 3 2.706923797014151 2.16454398147415 4 1.563263511711022 1.6667148785715884 5 1.056979442500362 1.40865835315207 6 0.8890815473715282 1.421876828986114 7 0.7310044706846531 1.36391467741297 8 0.6199659398940941 1.3219862786896777 9 0.5427277997050033 1.301948204518332 >10 7.4336758183714045 43.79356402123938 >50 0.46855209483132043 8.005671171328311 >100 0.07438297559476578 3.5237103165034647 >500 0.00656297367762599 1.2567191621317229 >1k 0.0018422382252971873 0.7934556941008725 >5k 6.908393344864452E-4 1.1540001937642534 >10k+ 4.6055955632429683E-4 6.286787556311195 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 144344 4.194456519970337 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 32485 0.9439735635096462 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14559 0.4230663725146049 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 13461 0.3911598626567138 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8843 0.2569665452398277 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6537 0.18995706278782695 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 6336 0.18411625360619113 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5459 0.1586317279728847 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 5332 0.1549412664501596 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5095 0.14805434219121588 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.036614027705776646 0.0 2 0.0 0.0 0.0 0.10908655556149646 0.0 3 0.0 0.0 0.0 0.17844979693743998 0.0 4 0.0 0.0 0.0 0.2274137943058794 0.0 5 0.0 0.0 0.0 0.49152879257397775 0.0 6 0.0 0.0 0.0 0.6385370196878858 0.0 7 0.0 0.0 0.0 0.96960338290369 0.0 8 0.0 0.0 0.0 1.308689961712188 0.0 9 0.0 0.0 0.0 1.670645778460723 0.0 10 0.0 0.0 0.0 1.8731562221762448 0.0 11 0.0 0.0 0.0 2.0585510608769235 0.0 12 0.0 0.0 0.0 2.2116035084374994 0.0 13 0.0 0.0 0.0 2.29235778065524 0.0 14 0.0 0.0 0.0 2.349923168659322 0.0 15 0.0 0.0 0.0 2.48955047272778 0.0 16 0.0 0.0 0.0 2.638592812492009 0.0 17 0.0 0.0 0.0 2.852319934536443 0.0 18 0.0 0.0 0.0 2.960854373807138 0.0 19 0.0 0.0 0.0 3.1042011981504687 0.0 20 0.0 0.0 0.0 3.252749539128191 0.0 21 0.0 0.0 0.0 3.4134734972556915 0.0 22 0.0 0.0 0.0 3.5775973293844427 0.0 23 0.0 0.0 0.0 3.724082498959697 0.0 24 0.0 0.0 0.0 3.8558348811961975 0.0 25 0.0 0.0 0.0 3.9861343258253266 0.0 26 0.0 0.0 0.0 4.126139393671701 0.0 27 0.0 0.0 0.0 4.2789303124629505 0.0 28 0.0 0.0 0.0 4.434510871460353 0.0 29 0.0 0.0 0.0 4.590992251774328 0.0 30 0.0 0.0 0.0 4.748694099678494 0.0 31 0.0 0.0 0.0 4.907500180164264 0.0 32 0.0 0.0 0.0 5.097718771721417 0.0 33 0.0 0.0 0.0 5.276546332436774 0.0 34 0.0 0.0 0.0 5.4941963860211125 0.0 35 0.0 0.0 0.0 5.68575168017705 0.0 36 0.0 0.0 0.0 5.890180001534302 0.0 37 0.0 0.0 0.0 6.128374592886883 0.0 38 0.0 0.0 0.0 6.380313974005203 0.0 39 0.0 0.0 0.0 6.674010781959397 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 42235 0.0 43.859947 1 CGCACTT 10010 0.0 41.583416 34 GCACTTA 10090 0.0 41.253716 35 CACTTAC 10085 0.0 41.251858 36 ACTTACT 10025 0.0 41.20698 37 CGTTTTA 2235 0.0 40.872482 1 CTTACTG 10085 0.0 40.850273 38 CCGCACT 10215 0.0 40.770927 33 ACCCGCA 10205 0.0 40.700638 31 CCCGCAC 10290 0.0 40.626823 32 ACGGGTA 495 0.0 40.0 4 CACGACG 835 0.0 39.88024 25 CTTATGA 10680 0.0 39.712082 25 TGACCCG 10450 0.0 39.638756 29 AACGCAA 10865 0.0 39.636444 17 TCAACGC 10915 0.0 39.55795 15 TTATGAC 10710 0.0 39.537815 26 ATCAACG 10940 0.0 39.46755 14 CTTAATC 11045 0.0 39.438663 10 CAACGCA 10920 0.0 39.436813 16 >>END_MODULE