##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043445_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2064238 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.533170109260656 31.0 31.0 33.0 30.0 34.0 2 30.567944684672987 31.0 31.0 34.0 26.0 34.0 3 31.530682508509194 31.0 31.0 34.0 28.0 34.0 4 35.13871801604272 37.0 35.0 37.0 32.0 37.0 5 35.45469853766862 37.0 35.0 37.0 33.0 37.0 6 35.817996277561015 37.0 35.0 37.0 35.0 37.0 7 33.744039689221886 37.0 35.0 37.0 32.0 37.0 8 34.76219505696533 37.0 35.0 37.0 31.0 37.0 9 36.74804746351923 39.0 37.0 39.0 32.0 39.0 10 36.72167598891213 39.0 35.0 39.0 32.0 39.0 11 36.54622916543538 39.0 35.0 39.0 32.0 39.0 12 36.555799282834634 39.0 35.0 39.0 32.0 39.0 13 36.585093385549534 39.0 35.0 39.0 32.0 39.0 14 37.87708297202164 40.0 36.0 41.0 33.0 41.0 15 37.97456204178007 40.0 36.0 41.0 33.0 41.0 16 37.83937801745729 40.0 36.0 41.0 33.0 41.0 17 37.78751045179868 40.0 36.0 41.0 33.0 41.0 18 37.57031069091839 39.0 36.0 41.0 33.0 41.0 19 37.35227236394253 39.0 35.0 41.0 33.0 41.0 20 37.08131668925773 38.0 35.0 41.0 32.0 41.0 21 36.97537299478064 38.0 35.0 41.0 32.0 41.0 22 36.90211739150234 38.0 35.0 40.0 32.0 41.0 23 36.84092241301633 38.0 35.0 40.0 32.0 41.0 24 36.70916483467507 38.0 35.0 40.0 32.0 41.0 25 36.608697737373305 38.0 35.0 40.0 32.0 41.0 26 36.358334164955785 38.0 35.0 40.0 31.0 41.0 27 36.22927540332074 38.0 35.0 40.0 31.0 41.0 28 36.068510026460125 37.0 35.0 40.0 30.0 41.0 29 35.97339502518605 37.0 35.0 40.0 30.0 41.0 30 35.821431443467276 37.0 35.0 40.0 30.0 41.0 31 35.469666288480305 37.0 34.0 40.0 29.0 41.0 32 35.32774127789528 38.0 34.0 40.0 27.0 41.0 33 35.07376426555465 38.0 34.0 40.0 25.0 41.0 34 34.89314410450733 38.0 34.0 40.0 24.0 41.0 35 34.70775172242735 38.0 34.0 40.0 23.0 41.0 36 34.55677107000259 37.0 34.0 40.0 22.0 41.0 37 34.42821612624126 37.0 34.0 40.0 22.0 41.0 38 34.323374533362916 37.0 34.0 40.0 21.0 41.0 39 34.19425812333655 37.0 34.0 40.0 21.0 41.0 40 34.11364241913965 37.0 34.0 40.0 21.0 41.0 41 34.01387776021951 37.0 33.0 40.0 20.0 41.0 42 33.91562746156209 36.0 33.0 40.0 20.0 41.0 43 33.75648205294157 36.0 33.0 40.0 18.0 41.0 44 33.555880184358585 36.0 33.0 40.0 18.0 41.0 45 33.35670450791042 35.0 33.0 40.0 18.0 41.0 46 33.365795029449124 35.0 33.0 40.0 18.0 41.0 47 33.33283662058348 35.0 33.0 40.0 18.0 41.0 48 33.23726527658148 35.0 33.0 40.0 18.0 41.0 49 33.181270279880515 35.0 33.0 40.0 18.0 41.0 50 33.09488828323091 35.0 33.0 40.0 18.0 41.0 51 32.676377433222335 35.0 32.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 3.0 12 11.0 13 31.0 14 45.0 15 101.0 16 218.0 17 536.0 18 1157.0 19 2160.0 20 3836.0 21 6031.0 22 9465.0 23 14726.0 24 22990.0 25 34592.0 26 44670.0 27 50183.0 28 51815.0 29 52691.0 30 56831.0 31 64558.0 32 77705.0 33 100659.0 34 169160.0 35 199196.0 36 197596.0 37 212375.0 38 283282.0 39 407411.0 40 199.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.470814896344315 17.321064722188044 24.69502063231081 30.51309974915683 2 31.594467304642198 20.42124018645137 27.720834516174975 20.26345799273146 3 23.601590514272093 21.34027180974287 36.021863757958144 19.036273918026893 4 22.74364680816844 24.523964775379582 32.78139439347595 19.950994022976033 5 20.39241599079176 32.48312452343189 31.207593310461295 15.916866175315056 6 80.42178275954613 2.1789638597874856 16.193094013384115 1.206159367282261 7 76.42437548383472 7.322605242224976 14.946386996073127 1.306632277867184 8 75.50665184925381 4.103548137375633 17.773628816057062 2.6161711973134882 9 39.16549351382931 23.067543568135072 24.1537555262523 13.61320739178331 10 28.14161932877895 22.67461407066433 34.168153090874206 15.015613509682508 11 26.234571788718164 19.24201569780229 38.52588703434391 15.997525479135643 12 22.462090127204323 21.528040855754035 37.263435708479356 18.74643330856229 13 17.92748704364516 24.20840038793976 39.27250636796726 18.591606200447817 14 18.26533568319157 21.771181423847445 40.58873056304554 19.374752329915445 15 21.932209367330703 19.303539611227 39.9262100591114 18.838040962330894 16 22.05443364573271 19.59294422445474 37.273027625690446 21.079594504122102 17 22.31317319030073 20.922684302875926 37.42325255130465 19.340889955518694 18 23.161476535166972 24.194787616544218 34.646392518692124 17.997343329596685 19 24.031676579929254 23.318483624465784 34.347686652411205 18.30215314319376 20 22.468194074520476 25.273539194608375 36.09113871559384 16.167128015277306 21 20.622573559831764 21.343469115479902 36.950341966381785 21.083615358306552 22 20.26520197767893 23.382478183232745 36.49947341343391 19.852846425654405 23 20.569333574907546 22.489025005837505 38.64099004087707 18.30065137837788 24 21.556719719334687 21.822483647718915 36.91512315924811 19.705673473698283 25 18.197465602319113 24.663919567414222 36.391394790716966 20.747220039549703 26 17.728382095475425 24.241875210125965 36.513667513145286 21.516075181253324 27 19.274134087251568 24.32723358449946 37.92828152567679 18.470350802572185 28 19.54261088110964 24.106183492407368 36.50063607006556 19.850569556417426 29 19.8450469374171 23.458922856763607 38.44605127897074 18.249978926848552 30 23.62615163561566 23.704243406041357 34.581719743556704 18.08788521478628 31 22.749217871195086 23.703371413567623 35.17569195024992 18.37171876498737 32 23.148154427929338 23.389696343154228 33.53479589078391 19.927353338132523 33 19.516402662871236 25.381278709141096 35.04416641879473 20.05815220919293 34 19.44097531389307 25.271020105239806 34.47945440399799 20.80855017686914 35 22.386081449910332 27.007302452527277 31.62755457461785 18.979061522944544 36 20.546177330327218 27.204566527696905 31.577124343220113 20.672131798755764 37 21.10071609959704 29.012255369778096 30.78240009146232 19.10462843916254 38 21.368078680849788 27.08641154750567 30.260270375799692 21.28523939584486 39 21.347296193559075 25.147342506048236 32.78037706892326 20.724984231469435 40 19.237413515302016 25.84130318306319 32.89896804535136 22.02231525628343 41 19.175695825772028 27.584997466377427 30.83166766622841 22.407639041622136 42 19.100074700688584 25.00409352022393 31.60604542693236 24.28978635215513 43 19.589359366507157 24.750634374524644 33.15339607157702 22.506610187391182 44 19.89547716881484 27.760316397624692 32.13839683214823 20.205809601412238 45 20.97248476193152 27.36535225104857 32.56082874164704 19.10133424537287 46 19.51853420002926 27.105546937901543 31.276819824070675 22.099099037998528 47 19.103029786294023 27.17966629816911 33.38524918153817 20.332054733998696 48 21.072231012121666 26.203131615637343 32.480944542247556 20.24369282999344 49 19.964461462292622 25.543178645098095 32.755379951342825 21.736979941266462 50 18.63782180155583 26.59523756466066 34.03003917183968 20.736901461943827 51 17.929957688987415 24.689352681231526 34.3201704454622 23.060519184318863 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 688.0 1 8964.5 2 17241.0 3 64767.5 4 112294.0 5 70040.5 6 27787.0 7 26052.5 8 24318.0 9 24968.0 10 25618.0 11 26353.0 12 27088.0 13 26273.5 14 25459.0 15 23499.5 16 21540.0 17 19484.0 18 17428.0 19 15968.5 20 14509.0 21 14029.5 22 13550.0 23 13144.5 24 12739.0 25 13124.5 26 15299.0 27 17088.0 28 18655.5 29 20223.0 30 24389.5 31 28556.0 32 31087.5 33 33619.0 34 38752.0 35 43885.0 36 49572.0 37 55259.0 38 60968.0 39 66677.0 40 71835.0 41 76993.0 42 87959.0 43 98925.0 44 105125.5 45 111326.0 46 117290.0 47 123254.0 48 131156.0 49 139058.0 50 138038.5 51 137019.0 52 131182.5 53 125346.0 54 119248.5 55 113151.0 56 108955.5 57 104760.0 58 99520.5 59 94281.0 60 88028.0 61 81775.0 62 75965.5 63 70156.0 64 61024.0 65 51892.0 66 42854.0 67 33816.0 68 28226.5 69 22637.0 70 20222.0 71 17807.0 72 18464.0 73 19121.0 74 15941.5 75 9319.5 76 5877.0 77 4084.0 78 2291.0 79 1781.0 80 1271.0 81 999.0 82 727.0 83 658.0 84 589.0 85 405.0 86 221.0 87 134.5 88 48.0 89 37.5 90 27.0 91 23.0 92 19.0 93 12.5 94 6.0 95 5.0 96 4.0 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2064238.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.47787600617505 #Duplication Level Percentage of deduplicated Percentage of total 1 77.7656508980089 23.70131865609011 2 9.121971681292306 5.560366436685342 3 3.2333363117962097 2.9563566959156464 4 1.6790777883627852 2.046988985537744 5 1.0295513078058809 1.5689268550651503 6 0.7384783188701745 1.3504350381464267 7 0.5629663428742036 1.2010612875638866 8 0.4567865532256621 1.1137507144399847 9 0.3615124632404861 0.9916318826397408 >10 4.045094134050632 28.55024421824658 >50 0.8373546242332467 17.23574204300073 >100 0.1630717299713328 7.517102921167555 >500 0.003321191140740182 0.7019298656703956 >1k 0.0013284764562960729 0.9571126750084974 >5k 3.321191140740182E-4 0.7788592330234132 >10k+ 1.660595570370091E-4 3.7681724917988295 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 74453 3.6068030915039837 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8054 0.3901681879705732 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 7335 0.355336933047449 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3372 0.16335325674655732 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3302 0.15996217490425038 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3212 0.15560221253557002 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2672 0.1294424383234879 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04229163497619945 0.0 2 0.0 0.0 0.0 0.1403423442451888 0.0 3 0.0 0.0 0.0 0.23156244580324556 0.0 4 0.0 0.0 0.0 0.2880966245171342 0.0 5 0.0 0.0 0.0 0.6115089442205792 0.0 6 0.0 0.0 0.0 0.7160511530162704 0.0 7 0.0 0.0 0.0 1.0173729967184018 0.0 8 0.0 0.0 0.0 1.3683015233708515 0.0 9 0.0 0.0 0.0 1.6780526276524315 0.0 10 0.0 0.0 0.0 1.8786108966117279 0.0 11 0.0 0.0 0.0 2.100775201309151 0.0 12 0.0 0.0 0.0 2.2906273404520214 0.0 13 0.0 0.0 0.0 2.386594956589308 0.0 14 0.0 0.0 0.0 2.4614409772516543 0.0 15 0.0 0.0 0.0 2.6910656620021527 0.0 16 0.0 0.0 0.0 2.9614317728866535 0.0 17 0.0 0.0 0.0 3.2865396335112522 0.0 18 0.0 0.0 0.0 3.4806064029438466 0.0 19 0.0 0.0 0.0 3.699524957877919 0.0 20 9.688805263734123E-5 0.0 0.0 3.959475603103906 0.0 21 9.688805263734123E-5 0.0 0.0 4.231198146725329 0.0 22 1.4533207895601186E-4 0.0 0.0 4.511931279242026 0.0 23 1.4533207895601186E-4 0.0 0.0 4.746933250913896 0.0 24 2.422201315933531E-4 0.0 0.0 4.962848276216212 0.0 25 2.422201315933531E-4 0.0 0.0 5.172853130307649 0.0 26 2.422201315933531E-4 0.0 0.0 5.406934665479465 0.0 27 2.422201315933531E-4 0.0 0.0 5.642663297546116 0.0 28 2.422201315933531E-4 0.0 0.0 5.899949521324576 0.0 29 2.422201315933531E-4 0.0 0.0 6.174675594577757 0.0 30 2.422201315933531E-4 0.0 0.0 6.4487234514624765 0.0 31 2.422201315933531E-4 0.0 0.0 6.711290074109671 0.0 32 2.422201315933531E-4 0.0 0.0 7.006750190627243 0.0 33 2.422201315933531E-4 0.0 0.0 7.295476587486521 0.0 34 2.422201315933531E-4 0.0 0.0 7.618259134847823 0.0 35 2.422201315933531E-4 0.0 0.0 7.9005424762067165 0.0 36 2.422201315933531E-4 0.0 0.0 8.212861113883186 0.0 37 2.422201315933531E-4 0.0 0.0 8.567616718614811 0.0 38 2.422201315933531E-4 0.0 0.0 8.905610690240175 0.0 39 2.422201315933531E-4 0.0 0.0 9.32780037960739 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCCAA 20 7.034594E-4 45.0 29 TGCGTAC 20 7.034594E-4 45.0 24 CGTAATC 25 3.89189E-5 44.999996 33 CGTTTTT 23445 0.0 44.14587 1 TCACGAC 655 0.0 43.625957 24 CGGTCTA 610 0.0 43.524586 30 ACGGTCT 620 0.0 43.185482 29 CACGACG 645 0.0 42.55814 25 CCGCACT 2895 0.0 41.891193 33 CGACGGT 640 0.0 41.835938 27 CTAGCGG 540 0.0 41.666668 1 CCCGCAC 2945 0.0 41.56197 32 ACGGGAT 750 0.0 41.100002 4 ACCCGCA 2940 0.0 41.09694 31 CACTTAC 2965 0.0 41.053963 36 CGTTTTA 1245 0.0 41.024097 1 CGCACTT 2960 0.0 40.89527 34 ATCAACG 3160 0.0 40.656647 14 GACGGTC 660 0.0 40.56818 28 CAACGCA 3165 0.0 40.379147 16 >>END_MODULE