##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043435_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1114788 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53451597971991 31.0 31.0 33.0 30.0 34.0 2 30.552448537300364 31.0 31.0 34.0 26.0 34.0 3 31.490058199406523 31.0 31.0 34.0 28.0 34.0 4 35.08932998919974 37.0 35.0 37.0 32.0 37.0 5 35.410741773323714 37.0 35.0 37.0 33.0 37.0 6 35.8329009641295 37.0 35.0 37.0 35.0 37.0 7 33.740645755067334 37.0 35.0 37.0 32.0 37.0 8 34.78094938230408 37.0 35.0 37.0 31.0 37.0 9 36.71512610469435 39.0 37.0 39.0 32.0 39.0 10 36.67786700251528 39.0 35.0 39.0 32.0 39.0 11 36.3732575162273 38.0 35.0 39.0 32.0 39.0 12 36.25644427460647 39.0 35.0 39.0 32.0 39.0 13 36.28149477748236 39.0 35.0 39.0 32.0 39.0 14 37.6285607667108 40.0 35.0 41.0 33.0 41.0 15 37.81804163661611 40.0 35.0 41.0 33.0 41.0 16 37.78784755487142 40.0 35.0 41.0 33.0 41.0 17 37.72954229862539 40.0 36.0 41.0 33.0 41.0 18 37.44560669831394 39.0 36.0 41.0 33.0 41.0 19 37.16939543662113 38.0 35.0 41.0 33.0 41.0 20 36.87569205983559 38.0 35.0 40.0 32.0 41.0 21 36.77126323570042 38.0 35.0 40.0 32.0 41.0 22 36.707463661252184 38.0 35.0 40.0 32.0 41.0 23 36.614288994858214 37.0 35.0 40.0 32.0 41.0 24 36.47819854537365 37.0 35.0 40.0 32.0 41.0 25 36.40465003211373 37.0 35.0 40.0 32.0 41.0 26 36.14680369720521 37.0 35.0 40.0 31.0 41.0 27 36.08814231943652 37.0 35.0 40.0 31.0 41.0 28 35.98737158993459 36.0 35.0 40.0 31.0 41.0 29 35.910539941226496 36.0 35.0 40.0 31.0 41.0 30 35.73514426061278 36.0 35.0 40.0 30.0 41.0 31 35.30781188889726 36.0 34.0 40.0 29.0 41.0 32 35.122818867802664 37.0 34.0 40.0 27.0 41.0 33 34.96734715479535 37.0 34.0 40.0 25.0 41.0 34 34.73867138864071 37.0 34.0 40.0 24.0 41.0 35 34.49675184878201 37.0 34.0 40.0 23.0 41.0 36 34.31573895664467 37.0 34.0 40.0 22.0 41.0 37 34.24726136269856 36.0 34.0 40.0 21.0 41.0 38 34.156834303921464 36.0 34.0 40.0 21.0 41.0 39 34.01685881082322 36.0 34.0 40.0 20.0 41.0 40 33.968978855172466 36.0 34.0 40.0 20.0 41.0 41 33.9093424041163 36.0 33.0 40.0 20.0 41.0 42 33.80494138795897 36.0 33.0 40.0 18.0 41.0 43 33.654210486657554 35.0 33.0 40.0 18.0 41.0 44 33.46337509912198 35.0 33.0 40.0 18.0 41.0 45 33.294342063244315 35.0 33.0 40.0 18.0 41.0 46 33.312182226575814 35.0 33.0 40.0 18.0 41.0 47 33.291700305349536 35.0 33.0 40.0 18.0 41.0 48 33.24087988030011 35.0 33.0 40.0 18.0 41.0 49 33.14289981592913 35.0 33.0 40.0 17.0 41.0 50 33.06553263938973 35.0 33.0 40.0 17.0 41.0 51 32.592503686799645 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 4.0 11 4.0 12 8.0 13 7.0 14 30.0 15 72.0 16 122.0 17 324.0 18 672.0 19 1122.0 20 2037.0 21 3314.0 22 5290.0 23 8520.0 24 13654.0 25 20676.0 26 25484.0 27 27260.0 28 26754.0 29 26931.0 30 29164.0 31 34223.0 32 42344.0 33 56326.0 34 97606.0 35 133748.0 36 104396.0 37 100807.0 38 135931.0 39 217847.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.34097245395537 18.021004890615973 25.620387015289005 30.017635640139652 2 31.60188304861552 21.021485699523137 29.22753025687395 18.14910099498739 3 21.767188021399583 21.71632633289917 38.44748956752315 18.068996078178092 4 22.678751475616888 24.79117105673904 35.31667007538653 17.21340739225754 5 19.369422706380046 31.533080729250763 33.08422767378192 16.013268890587266 6 79.00461791838448 1.988898337621144 17.711080492434437 1.2954032515599379 7 75.49516141185589 7.229715425713231 15.840680021672283 1.4344431407586016 8 74.99677068644442 3.499499456398885 18.830396452060842 2.673333405095857 9 40.111213970728066 21.802800173665307 26.299798706121702 11.786187149484924 10 31.34766430926777 23.68674582073004 34.49785968273788 10.467730187264305 11 29.39742803115929 20.764127349774128 36.73990032185492 13.098544297211667 12 19.52550619489984 30.298316810012306 35.68158250716728 14.494594487920573 13 14.367216008783734 32.51299798706121 35.907903565520975 17.21188243863407 14 13.02561563274811 23.85484953192894 45.695594139872334 17.423940695450614 15 15.513532617860976 20.936716218689114 46.05342002246167 17.496331140988243 16 17.27180414572098 22.069218542000808 35.9183091314223 24.740668180855913 17 18.831293483604057 22.328281251681933 40.83422139456112 18.00620387015289 18 22.428120862442007 24.136517436499137 35.612421375185235 17.822940325873617 19 22.856004908556603 24.18092049788839 35.72966339788372 17.233411195671284 20 18.00351277552324 26.779172362816965 37.04013677936971 18.177178082290084 21 18.84241667473995 24.232410108469054 34.915248459796835 22.009924756994153 22 15.025816567813791 27.400097597031902 36.093050876041005 21.481034959113302 23 14.837798756355468 23.75518932747751 45.63459599493356 15.772415921233454 24 15.823187906579546 24.09955973691859 42.12612622310251 17.951126133399356 25 15.272948757970125 29.139352056175703 36.70339113804598 18.884308047808194 26 14.968765361665179 30.42165864720467 36.30143130353036 18.308144687599796 27 15.252496438784775 27.712264574071483 40.37870877691543 16.65653021022831 28 14.049487436176205 24.479721704934033 40.26397844253795 21.20681241635181 29 15.495143471225022 29.26027190820138 38.268442071497 16.976142549076595 30 20.58768124522331 27.6065942582805 35.76321237760005 16.04251211889615 31 21.112265291696716 26.422871433851096 35.46728167149269 16.997581602959485 32 19.057255729340465 28.343954186805025 35.77971775799524 16.819072325859267 33 17.163980954226275 26.858469951237364 35.512581764425164 20.464967330111197 34 16.828939672834657 26.087561042996516 36.49474160109366 20.58875768307517 35 22.782448322012797 26.16040000430575 34.38294994205176 16.67420173162969 36 17.432911010882787 29.566608180210046 35.68400449233397 17.316476316573194 37 17.690000251168833 28.962188326390308 35.12291126205162 18.22490016038924 38 17.055978356422923 30.423632116599748 34.624879349257434 17.89551017771989 39 20.2700423757701 26.459111508197076 33.471117378371495 19.799728737661333 40 15.33008966727306 26.650627742673944 35.7650961438408 22.254186446212195 41 17.80410266346606 26.94628933931833 33.42061450248836 21.828993494727246 42 17.87245646705921 25.83621280458706 35.21207619744741 21.079254530906326 43 17.732609249471647 27.758820511164455 34.73144669659164 19.77712354277226 44 15.307753581846953 33.33719056896916 32.17688026781774 19.178175581366144 45 18.626590885441896 29.796696771045255 33.13508936228233 18.441622981230513 46 17.459821957179305 29.102394356595156 32.54959687402448 20.888186812201067 47 17.026466018651078 27.183285073036306 36.62310681492804 19.16714209338457 48 18.102455354740094 25.383391281571026 36.68042713053962 19.833726233149264 49 17.502879471253728 29.19667237178728 33.69860457773137 19.60184357922762 50 16.180116757625665 28.283314854483542 34.20991255736517 21.326655830525628 51 16.450840877368613 26.258445551979392 35.87543102365652 21.41528254699548 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1010.0 1 5773.5 2 10537.0 3 37932.0 4 65327.0 5 39989.0 6 14651.0 7 14324.0 8 13997.0 9 15300.5 10 16604.0 11 17166.5 12 17729.0 13 17490.5 14 17252.0 15 15573.5 16 13895.0 17 12372.0 18 10849.0 19 9860.5 20 8872.0 21 7944.5 22 7017.0 23 6566.5 24 6116.0 25 6876.0 26 8111.5 27 8587.0 28 9814.5 29 11042.0 30 14410.5 31 17779.0 32 20816.5 33 23854.0 34 26010.0 35 28166.0 36 32171.5 37 36177.0 38 41005.5 39 45834.0 40 54931.5 41 64029.0 42 73666.0 43 83303.0 44 91587.5 45 99872.0 46 97612.5 47 95353.0 48 91773.0 49 88193.0 50 79262.5 51 70332.0 52 63134.0 53 55936.0 54 49791.0 55 43646.0 56 40571.0 57 37496.0 58 33922.5 59 30349.0 60 24815.0 61 19281.0 62 16397.0 63 13513.0 64 11345.5 65 9178.0 66 7636.5 67 6095.0 68 5326.0 69 4557.0 70 3876.0 71 3195.0 72 3113.5 73 3032.0 74 2511.5 75 1558.5 76 1126.0 77 948.5 78 771.0 79 553.5 80 336.0 81 232.0 82 128.0 83 99.5 84 71.0 85 56.0 86 41.0 87 26.0 88 11.0 89 8.5 90 6.0 91 5.5 92 5.0 93 6.0 94 7.0 95 5.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1114788.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.492295612205965 #Duplication Level Percentage of deduplicated Percentage of total 1 79.10049580569726 25.701566927907738 2 9.556999566163912 6.21057710139044 3 3.461433762154092 3.3740978712594294 4 1.7370762986019264 2.257663863805214 5 0.9973814006817074 1.6203605654533038 6 0.6833808399943648 1.3322767361288714 7 0.4703571453401184 1.0698088386793116 8 0.3563532095528283 0.92629870617191 9 0.29201433161120977 0.8539394387140952 >10 2.29545912713183 16.696336491497743 >50 0.6742658028734102 15.778076924176457 >100 0.3681975288875462 17.525346613267693 >500 0.004867307924622756 1.0558838764235852 >1k 0.0011452489234406486 0.5274767911296676 >5k 2.8631223086016214E-4 0.4989167602871971 >10k+ 2.8631223086016214E-4 4.571372493707361 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 49139 4.407923300214929 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5363 0.4810780166273767 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2111 0.1893633587731479 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1395 0.12513590027879742 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 1158 0.10387625270455009 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08333423036487655 0.0 2 0.0 0.0 0.0 0.28920296953322067 0.0 3 0.0 0.0 0.0 0.4626888699914244 0.0 4 0.0 0.0 0.0 0.5851336756405702 0.0 5 0.0 0.0 0.0 1.298901674578485 0.0 6 0.0 0.0 0.0 1.4517558495426932 0.0 7 0.0 0.0 0.0 1.9788515843371117 0.0 8 0.0 0.0 0.0 2.596726911305109 0.0 9 0.0 0.0 0.0 3.0485616996236056 0.0 10 0.0 0.0 0.0 3.4084507547623404 0.0 11 0.0 0.0 0.0 3.8145369343767603 0.0 12 0.0 0.0 0.0 4.146528308521441 0.0 13 0.0 0.0 0.0 4.2967810920103195 0.0 14 0.0 0.0 0.0 4.416624506184135 0.0 15 0.0 0.0 0.0 4.8628976989346855 0.0 16 0.0 0.0 0.0 5.398246123926702 0.0 17 0.0 0.0 0.0 6.018453732907064 0.0 18 0.0 0.0 0.0 6.359953641409846 0.0 19 0.0 0.0 0.0 6.725673401579493 0.0 20 0.0 0.0 0.0 7.167371733459635 0.0 21 0.0 0.0 0.0 7.605751048629874 0.0 22 0.0 0.0 0.0 8.05650939909651 0.0 23 8.970315432171856E-5 0.0 0.0 8.410208936587047 0.0 24 0.0011661410061823414 0.0 0.0 8.716096692824106 0.0 25 0.0011661410061823414 0.0 0.0 9.029250404561227 0.0 26 0.0011661410061823414 0.0 0.0 9.374786955008487 0.0 27 0.001435250469147497 0.0 0.0 9.697269794795064 0.0 28 0.0016146567777909342 0.0 0.0 10.043434267322576 0.0 29 0.0016146567777909342 0.0 0.0 10.436782599023312 0.0 30 0.0016146567777909342 0.0 0.0 10.842420262866124 0.0 31 0.0016146567777909342 0.0 0.0 11.196030097202337 0.0 32 0.0016146567777909342 0.0 0.0 11.571527501193051 0.0 33 0.0016146567777909342 0.0 0.0 11.950074812430705 0.0 34 0.0016146567777909342 0.0 0.0 12.385673329816969 0.0 35 0.0016146567777909342 0.0 0.0 12.768885205079352 0.0 36 0.0016146567777909342 0.0 0.0 13.132990308471207 0.0 37 0.0016146567777909342 0.0 0.0 13.539704410165879 0.0 38 0.0016146567777909342 0.0 0.0 13.95574763991001 0.0 39 0.0016146567777909342 0.0 0.0 14.380312669314703 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCATCGA 65 0.0 45.000004 15 AACCGTA 20 7.0331956E-4 45.0 37 CTAGACG 20 7.0331956E-4 45.0 12 GGTACGC 20 7.0331956E-4 45.0 7 CTCGTAG 25 3.8907303E-5 45.0 21 TCGATCC 20 7.0331956E-4 45.0 45 GTTACGC 25 3.8907303E-5 45.0 9 CTAACGG 80 0.0 45.0 1 CCACTCG 20 7.0331956E-4 45.0 18 TACGCCC 20 7.0331956E-4 45.0 37 CTAGTTC 25 3.8907303E-5 45.0 32 GTAGACT 25 3.8907303E-5 45.0 8 CACTAGT 25 3.8907303E-5 45.0 29 GTATGCG 20 7.0331956E-4 45.0 11 CCGAGTG 25 3.8907303E-5 45.0 13 AGCGCGC 20 7.0331956E-4 45.0 35 ACGTGAC 20 7.0331956E-4 45.0 28 GTCGTGG 35 1.2118835E-7 45.0 1 TCCACCG 25 3.8907303E-5 45.0 30 CGTGTAT 25 3.8907303E-5 45.0 21 >>END_MODULE