##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043434_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 458946 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.529661441651086 31.0 31.0 33.0 30.0 34.0 2 30.564659023065893 31.0 31.0 34.0 26.0 34.0 3 31.47395336270498 31.0 31.0 34.0 28.0 34.0 4 35.0795779895674 37.0 35.0 37.0 32.0 37.0 5 35.38560963599203 37.0 35.0 37.0 33.0 37.0 6 35.81251824833423 37.0 35.0 37.0 35.0 37.0 7 33.717881842308245 37.0 35.0 37.0 32.0 37.0 8 34.76371512116894 37.0 35.0 37.0 31.0 37.0 9 36.766183821190296 39.0 37.0 39.0 32.0 39.0 10 36.70637068413277 39.0 35.0 39.0 32.0 39.0 11 36.18309779364021 37.0 35.0 39.0 32.0 39.0 12 35.870052250155794 38.0 35.0 39.0 31.0 39.0 13 35.96363406588139 38.0 35.0 39.0 31.0 39.0 14 37.35298270384751 39.0 35.0 41.0 32.0 41.0 15 37.57638807179929 40.0 35.0 41.0 33.0 41.0 16 37.548193033603084 40.0 35.0 41.0 33.0 41.0 17 37.54458912377491 39.0 35.0 41.0 33.0 41.0 18 37.26384803440928 39.0 35.0 40.0 33.0 41.0 19 36.96175367036645 37.0 35.0 40.0 33.0 41.0 20 36.62779063332069 37.0 35.0 40.0 32.0 41.0 21 36.514550731458606 37.0 35.0 40.0 32.0 41.0 22 36.456513402448216 37.0 35.0 40.0 32.0 41.0 23 36.35641883794607 36.0 35.0 40.0 32.0 41.0 24 36.219095492715915 36.0 35.0 40.0 32.0 41.0 25 36.113226828428616 35.0 35.0 40.0 32.0 41.0 26 35.857737075821554 35.0 35.0 40.0 31.0 41.0 27 35.78262148488057 36.0 35.0 40.0 31.0 41.0 28 35.726261913166255 36.0 35.0 40.0 31.0 41.0 29 35.67923677295368 36.0 35.0 40.0 31.0 41.0 30 35.50950874394809 35.0 35.0 40.0 31.0 41.0 31 35.05631163579157 35.0 34.0 40.0 29.0 41.0 32 34.89801414545502 35.0 34.0 40.0 27.0 41.0 33 34.784375503871914 35.0 34.0 40.0 27.0 41.0 34 34.61173863591795 35.0 34.0 40.0 25.0 41.0 35 34.38031053762316 35.0 34.0 40.0 23.0 41.0 36 34.233227874303296 35.0 34.0 40.0 23.0 41.0 37 34.176748462782115 35.0 34.0 40.0 23.0 41.0 38 34.09398273435219 35.0 34.0 40.0 23.0 41.0 39 33.94338767523848 35.0 33.0 40.0 22.0 41.0 40 33.910109250325746 35.0 34.0 40.0 22.0 41.0 41 33.84737637979196 35.0 33.0 40.0 22.0 41.0 42 33.743261734495995 35.0 33.0 40.0 21.0 41.0 43 33.58621493596196 35.0 33.0 40.0 21.0 41.0 44 33.3830232750694 35.0 33.0 40.0 20.0 41.0 45 33.2217929778231 35.0 33.0 40.0 19.0 41.0 46 33.24529465340149 35.0 33.0 40.0 20.0 41.0 47 33.25783861282155 35.0 33.0 39.0 20.0 41.0 48 33.21476164951868 35.0 33.0 39.0 20.0 41.0 49 33.09203915057545 35.0 33.0 39.0 19.0 41.0 50 32.968384080044274 35.0 33.0 39.0 18.0 41.0 51 32.553995459160774 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 0.0 12 1.0 13 5.0 14 4.0 15 17.0 16 54.0 17 131.0 18 268.0 19 527.0 20 866.0 21 1431.0 22 2108.0 23 3266.0 24 5223.0 25 7634.0 26 9816.0 27 10406.0 28 10569.0 29 11093.0 30 12305.0 31 14808.0 32 18313.0 33 24852.0 34 46449.0 35 67777.0 36 47281.0 37 37691.0 38 48908.0 39 77108.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.00119839806862 18.836202951981278 25.588195561133553 30.57440308881655 2 31.287340994365348 21.347173741573084 29.175327816344403 18.190157447717162 3 21.269822593507733 21.82958343683135 38.32585968719632 18.574734282464604 4 21.90083364927464 25.349169619083728 35.61835161435115 17.131645117290486 5 19.015308990600204 31.20781094072069 33.13941073677513 16.63746933190397 6 78.66350289576552 2.0845589677216925 17.81778248421383 1.4341556522989634 7 75.18793060621512 7.306306188527627 15.986630235365382 1.5191329698918827 8 75.00947823926998 3.4531295620835567 19.078497252400066 2.4588949462463994 9 43.318603931617226 22.15489403982168 24.87089984442614 9.655602184134953 10 35.47781220448593 21.38116466861025 33.46341399641788 9.677609130485939 11 32.37940847071333 21.022516810256544 34.62215598349261 11.975918735537515 12 17.804491160180064 36.6725061336192 33.013252103733336 12.509750602467392 13 11.456249754873122 39.54386790602816 34.696020882631075 14.303861456467645 14 10.271143010288792 24.17365005904834 51.84030365228153 13.714903278381335 15 11.818601752711649 21.28442126088908 50.544290613710544 16.352686372688726 16 13.611405263364318 21.56244961280848 35.56104639761541 29.265098726211797 17 16.182295956387026 22.378885533374294 42.31216744453596 19.126651065702717 18 20.80789461069494 25.305373616939686 35.886357000605734 18.000374771759642 19 23.18224802046428 24.160140844456645 35.74538180962466 16.912229325454412 20 15.783556235374096 29.585179955811796 37.25514548552553 17.376118323288576 21 17.036644834032764 25.56706017701429 33.42898728826485 23.9673077006881 22 12.906093527343085 30.34561800298946 34.27570999638302 22.47257847328444 23 12.4435118728565 24.412022329424378 48.05467309879594 15.089792698923185 24 13.045543484418646 25.244800041834985 44.920753204080654 16.78890326966571 25 11.856514709791565 33.006715386995424 36.93615370871519 18.20061619449783 26 12.88844439215071 35.51441781821826 35.129623092912894 16.467514696718133 27 12.16395828703159 29.58278315967456 42.185790920936235 16.06746763235762 28 10.68883920984168 25.999355043948526 40.96320700038785 22.34859874582195 29 12.380323611056639 33.33006497496437 37.54951562928972 16.740095784689267 30 20.92817019867261 29.264445054538008 32.99603874965682 16.81134599713256 31 20.76562384245641 29.11410056956592 34.39598558436069 15.724290003616984 32 19.442156593586173 30.02836935064256 33.28779420672585 17.241679849045422 33 14.322817935007603 30.855046127431113 32.67072814666649 22.15140779089479 34 13.879846430734771 28.84260893438444 35.86500372592854 21.412540908952252 35 22.901604981849715 27.986516932275258 31.200402661751053 17.91147542412397 36 15.90492127614142 32.840900672410264 35.011090629398666 16.243087422049655 37 16.00122890274673 32.72411133335948 31.9279392346812 19.34672052921259 38 15.317706222518554 32.623663786153486 33.63554753718302 18.423082454144932 39 19.453269012040632 28.74259716829431 31.998317884892774 19.805815934772284 40 12.973857490859492 27.013635591115293 35.4198533160764 24.592653601948815 41 16.32370692848396 28.458903661868717 31.579532232550235 23.63785717709709 42 16.130002222483693 26.89902515764382 32.87707050502674 24.093902114845754 43 16.065724507894174 30.328622539470874 33.63118972602442 19.97446322661054 44 12.46639038143921 38.37357771938311 29.894802438631125 19.265229460546557 45 17.049936158066526 33.66953846422019 31.010184204677678 18.270341173035607 46 15.592684106626923 32.11118519390081 31.101044567334718 21.19508613213755 47 15.93106814309309 28.873767284168505 35.49785813581554 19.69730643692286 48 17.673974715979657 25.614778209201084 36.17745878600097 20.533788288818293 49 17.285475851189464 31.916608925668815 32.144740339822114 18.653174883319608 50 14.165065171065876 31.527020608088968 31.99396007373416 22.31395414711099 51 14.641809711817949 28.563491129675388 35.95281362077456 20.841885537732107 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 620.0 1 2752.5 2 4885.0 3 18709.5 4 32534.0 5 18884.0 6 5234.0 7 5362.0 8 5490.0 9 6478.0 10 7466.0 11 8372.0 12 9278.0 13 9077.5 14 8877.0 15 7793.0 16 6709.0 17 5844.0 18 4979.0 19 4423.5 20 3868.0 21 3544.5 22 3221.0 23 3010.5 24 2800.0 25 2907.0 26 3228.5 27 3443.0 28 3734.0 29 4025.0 30 5052.0 31 6079.0 32 6898.0 33 7717.0 34 9748.5 35 11780.0 36 13241.5 37 14703.0 38 15815.5 39 16928.0 40 21232.0 41 25536.0 42 33675.5 43 41815.0 44 44361.5 45 46908.0 46 44850.0 47 42792.0 48 38409.5 49 34027.0 50 29214.0 51 24401.0 52 21127.0 53 17853.0 54 16092.0 55 14331.0 56 13999.0 57 13667.0 58 12616.5 59 11566.0 60 9221.0 61 6876.0 62 5561.5 63 4247.0 64 3631.0 65 3015.0 66 2636.0 67 2257.0 68 1906.5 69 1556.0 70 1420.5 71 1285.0 72 1366.5 73 1448.0 74 1193.0 75 698.5 76 459.0 77 303.5 78 148.0 79 132.5 80 117.0 81 73.5 82 30.0 83 21.0 84 12.0 85 10.0 86 8.0 87 5.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 458946.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.5049104798567 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94397425511515 27.2395476459686 2 9.300542751306699 6.418287900958355 3 3.4221018377543135 3.54237952693997 4 1.7684715535515865 2.4408381056588238 5 1.1329226594587043 1.9545697472611885 6 0.7536439375455405 1.5602649959217352 7 0.49011165122308253 1.1837881055411048 8 0.3668295764366932 1.012593735704948 9 0.3091962325401541 0.9601909492056274 >10 2.5984928494207264 20.691315987502502 >50 0.7461349836842095 17.741626035203296 >100 0.16439182390309653 8.140666045472793 >500 0.001274355224055012 0.3209920443565581 >1k 0.001274355224055012 0.8827281219805349 >5k 0.0 0.0 >10k+ 6.37177612027506E-4 5.9102110523239695 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 26882 5.857333978289385 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2885 0.6286142596296732 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1130 0.2462163304615358 No Hit GTCATGGGATTGAAGGGAATAATTTAGATTTTGATGAGATTCAGGAAATTA 917 0.19980564162232592 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 543 0.11831457295629552 No Hit CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 500 0.10894527896528133 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 475 0.10349801501701725 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10415168669080895 0.0 2 0.0 0.0 0.0 0.356686843332331 0.0 3 0.0 0.0 0.0 0.5702195901042825 0.0 4 0.0 0.0 0.0 0.7188209506129262 0.0 5 0.0 0.0 0.0 1.5840643561551904 0.0 6 0.0 0.0 0.0 1.784523669451308 0.0 7 0.0 0.0 0.0 2.4647779913105246 0.0 8 0.0 0.0 0.0 3.2191151028661324 0.0 9 0.0 0.0 0.0 3.792820941897304 0.0 10 0.0 0.0 0.0 4.177615667202677 0.0 11 0.0 0.0 0.0 4.642376227268567 0.0 12 0.0 0.0 0.0 5.04242329162908 0.0 13 0.0 0.0 0.0 5.218043081321114 0.0 14 0.0 0.0 0.0 5.35574991393323 0.0 15 0.0 0.0 0.0 5.844478435371482 0.0 16 0.0 0.0 0.0 6.417094821613 0.0 17 0.0 0.0 0.0 7.228519259346416 0.0 18 0.0 0.0 0.0 7.535309164912648 0.0 19 0.0 0.0 0.0 7.924025920260771 0.0 20 0.0 0.0 0.0 8.326905561874382 0.0 21 2.1789055793056263E-4 0.0 0.0 8.680324046837754 0.0 22 2.1789055793056263E-4 0.0 0.0 9.070783926649323 0.0 23 2.1789055793056263E-4 0.0 0.0 9.373433911614875 0.0 24 0.0026146866951667516 0.0 0.0 9.63555625280534 0.0 25 0.0026146866951667516 0.0 0.0 9.882644145498599 0.0 26 0.0026146866951667516 0.0 0.0 10.153046327890427 0.0 27 0.0026146866951667516 0.0 0.0 10.409067733458839 0.0 28 0.0026146866951667516 0.0 0.0 10.682302493103764 0.0 29 0.0026146866951667516 0.0 0.0 11.057510033860193 0.0 30 0.0026146866951667516 0.0 0.0 11.411582190497358 0.0 31 0.0026146866951667516 0.0 0.0 11.688956870742963 0.0 32 0.0026146866951667516 0.0 0.0 11.965024207640987 0.0 33 0.0026146866951667516 0.0 0.0 12.244795684023828 0.0 34 0.0026146866951667516 0.0 0.0 12.606929791304424 0.0 35 0.0026146866951667516 0.0 0.0 12.903478840647919 0.0 36 0.0026146866951667516 0.0 0.0 13.208307731192777 0.0 37 0.0026146866951667516 0.0 0.0 13.518583885685898 0.0 38 0.0026146866951667516 0.0 0.0 13.858057374941714 0.0 39 0.0026146866951667516 0.0 0.0 14.188597351322377 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGGTAA 20 7.0288515E-4 45.000004 18 GTCGCTG 20 7.0288515E-4 45.000004 11 AGTCCAT 20 7.0288515E-4 45.000004 21 ACGCCTA 20 7.0288515E-4 45.000004 17 ACTGCAC 20 7.0288515E-4 45.000004 37 GCGACAC 20 7.0288515E-4 45.000004 15 TCCGCCT 20 7.0288515E-4 45.000004 29 CTGTACG 20 7.0288515E-4 45.000004 12 TTGTGCG 20 7.0288515E-4 45.000004 26 CCGATTC 20 7.0288515E-4 45.000004 11 TAGACGC 20 7.0288515E-4 45.000004 9 TGGACGT 20 7.0288515E-4 45.000004 10 GGCACGG 20 7.0288515E-4 45.000004 1 TGGACCA 20 7.0288515E-4 45.000004 23 CTTCATC 25 3.8871294E-5 45.000004 14 GCAACTA 40 6.7993824E-9 45.000004 8 GCAACCT 20 7.0288515E-4 45.000004 23 CATGAGA 25 3.8871294E-5 45.000004 3 CAGTTCA 20 7.0288515E-4 45.000004 42 CGGTTGA 20 7.0288515E-4 45.000004 41 >>END_MODULE