SRR1043433_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1043433_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1311791
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	62403	4.7570840171948126	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6962	0.5307247877138965	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2777	0.21169530817028015	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	30	2.165738E-6	45.000004	2
GTCATCG	30	2.165738E-6	45.000004	22
CGAACGG	30	2.165738E-6	45.000004	1
CGTGATA	30	2.165738E-6	45.000004	9
TAGCGGA	75	0.0	45.000004	2
CTGCGAC	30	2.165738E-6	45.000004	11
GTCGATA	20	7.033652E-4	45.0	28
CGGCCCA	20	7.033652E-4	45.0	5
CGACATC	35	1.2121018E-7	45.0	10
CGTTAGC	20	7.033652E-4	45.0	45
TAACCGC	20	7.033652E-4	45.0	21
TTAAGCG	25	3.8911086E-5	45.0	12
CGAATAA	25	3.8911086E-5	45.0	13
GCGATCG	20	7.033652E-4	45.0	8
ACGCTAA	35	1.2121018E-7	45.0	37
ACGTCAA	20	7.033652E-4	45.0	32
ACCGTGC	20	7.033652E-4	45.0	13
TTATTCG	20	7.033652E-4	45.0	35
TATCGAC	25	3.8911086E-5	45.0	26
TGTCGAT	20	7.033652E-4	45.0	27