##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043433_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1311791 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.537357704085483 31.0 31.0 33.0 30.0 34.0 2 30.54212218257329 31.0 31.0 34.0 26.0 34.0 3 31.485092518549067 31.0 31.0 34.0 28.0 34.0 4 35.0954161143048 37.0 35.0 37.0 32.0 37.0 5 35.4257194934254 37.0 35.0 37.0 33.0 37.0 6 35.86611129364358 37.0 35.0 37.0 35.0 37.0 7 33.72003924405641 37.0 35.0 37.0 32.0 37.0 8 34.768568316141824 37.0 35.0 37.0 31.0 37.0 9 36.76477579126553 39.0 37.0 39.0 32.0 39.0 10 36.71227962381202 39.0 35.0 39.0 32.0 39.0 11 36.427140451489606 39.0 35.0 39.0 32.0 39.0 12 36.366606418248026 39.0 35.0 39.0 32.0 39.0 13 36.3845368660099 39.0 35.0 39.0 32.0 39.0 14 37.73278822617323 40.0 36.0 41.0 33.0 41.0 15 37.90012814541341 40.0 36.0 41.0 33.0 41.0 16 37.89027977779997 40.0 36.0 41.0 33.0 41.0 17 37.82729947072362 40.0 36.0 41.0 33.0 41.0 18 37.53149930133687 39.0 36.0 41.0 33.0 41.0 19 37.21215346042167 38.0 35.0 41.0 33.0 41.0 20 36.88298669528911 38.0 35.0 40.0 32.0 41.0 21 36.7919013013506 38.0 35.0 40.0 32.0 41.0 22 36.70517407117445 38.0 35.0 40.0 32.0 41.0 23 36.59709054262455 37.0 35.0 40.0 32.0 41.0 24 36.43989858140512 37.0 35.0 40.0 32.0 41.0 25 36.37288943131947 37.0 35.0 40.0 32.0 41.0 26 36.11090791139747 37.0 35.0 40.0 31.0 41.0 27 36.01811950226827 37.0 35.0 40.0 31.0 41.0 28 35.94064527047372 36.0 35.0 40.0 31.0 41.0 29 35.862657237319056 36.0 35.0 40.0 31.0 41.0 30 35.64766414771865 36.0 35.0 40.0 30.0 41.0 31 35.15751823270628 36.0 34.0 40.0 27.0 41.0 32 34.92316611411422 36.0 34.0 40.0 25.0 41.0 33 34.71754570659503 36.0 34.0 40.0 24.0 41.0 34 34.45344875822444 36.0 34.0 40.0 22.0 41.0 35 34.190635550937614 36.0 34.0 40.0 21.0 41.0 36 34.00591100259111 36.0 34.0 40.0 20.0 41.0 37 33.910767035297546 36.0 33.0 40.0 18.0 41.0 38 33.81494536858387 36.0 33.0 40.0 18.0 41.0 39 33.693400854251934 36.0 33.0 40.0 18.0 41.0 40 33.65686302162463 36.0 33.0 40.0 18.0 41.0 41 33.60224456487352 36.0 33.0 40.0 18.0 41.0 42 33.51969406711893 35.0 33.0 40.0 18.0 41.0 43 33.36232524845803 35.0 33.0 40.0 17.0 41.0 44 33.17902242049229 35.0 33.0 40.0 15.0 41.0 45 32.98960962531379 35.0 33.0 40.0 15.0 41.0 46 33.00596436475018 35.0 33.0 40.0 15.0 41.0 47 32.99022862635893 35.0 33.0 40.0 15.0 41.0 48 32.927293295959494 35.0 33.0 40.0 15.0 41.0 49 32.845540943641176 35.0 33.0 40.0 15.0 41.0 50 32.723284425644025 35.0 33.0 40.0 14.0 41.0 51 32.29700005564911 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 9.0 13 12.0 14 25.0 15 64.0 16 147.0 17 369.0 18 744.0 19 1413.0 20 2407.0 21 3960.0 22 6426.0 23 10310.0 24 16747.0 25 25427.0 26 32280.0 27 34794.0 28 33716.0 29 33933.0 30 35933.0 31 41207.0 32 50392.0 33 66368.0 34 110880.0 35 146795.0 36 134684.0 37 120508.0 38 157332.0 39 244798.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.568637839411917 18.458047051702593 25.39306947524415 29.580245633641333 2 33.0490908993887 19.706035488885043 29.290412878271006 17.954460733455253 3 20.721136217583442 21.092231918041822 39.723096133454185 18.46353573092055 4 21.432682492866622 24.73999287996335 36.97829913454201 16.849025492628016 5 19.153584679266743 31.18019562567513 34.2777927276525 15.38842696740563 6 77.07401560157068 2.2121664198031543 19.448829882199224 1.264988096426946 7 73.17004004448879 7.65868953209772 17.55066165265656 1.6206087707569272 8 71.48318596483738 4.367845182654858 21.03681150427164 3.1121573482361136 9 40.52444329927557 20.04610490543082 27.78399912790986 11.645452667383752 10 30.520105718060268 24.480576555259184 35.17099903871882 9.828318687961726 11 27.947820956234644 21.465919494797568 38.739860236882244 11.846399312085538 12 21.606185741478633 26.800229609747284 36.85000125782232 14.743583390951759 13 15.957801204612625 29.31061426705931 37.41076131792336 17.320823210404708 14 15.431040463000583 24.293199145290675 43.67616487687444 16.5995955148343 15 17.62125216593192 22.324821560751676 43.735015715155846 16.31891055816056 16 19.986567982247173 22.4320032688134 36.53889987048242 21.04252887845701 17 20.04488519893794 22.996422448393076 40.70389261704037 16.254799735628616 18 23.696533975305517 24.945589655669234 36.304792455505485 15.05308391351976 19 23.600100930712287 24.878048408626068 36.141809175394556 15.38004148526709 20 19.550217984419774 27.890266056101925 37.125426230245516 15.434089729232781 21 18.56286557843437 25.304564522854633 37.12001378268337 19.01255611602763 22 16.768067474163185 27.53212973713038 36.756922406084506 18.942880382621926 23 16.074511869649967 25.248534255838013 43.78105963526202 14.895894239250001 24 16.696714644329774 25.294654407599992 41.49921748205316 16.50941346601707 25 16.38126805260899 28.870376454785863 38.11819108379307 16.630164408812075 26 15.897273269903515 29.60723163979628 37.882482804044244 16.613012286255966 27 16.06666000910206 27.586787834342513 41.75070571455362 14.595846442001815 28 15.632520729293004 26.095163025207523 40.31053727308695 17.961778972412525 29 16.525345882080302 28.30687205507585 39.538767989717876 15.629014073125976 30 19.767325740152202 27.9703092946971 36.6454717252977 15.616893239852994 31 20.235769265073476 26.959020148788948 37.51031986040459 15.294890725732987 32 18.563704126648222 28.5320603663236 36.20569130295909 16.698544204069094 33 16.13938500873996 28.363817101962123 36.45611229227826 19.040685597019646 34 16.64929855441911 28.198623103832855 37.2705713028981 17.88150703884994 35 20.990920047477076 28.14739543113194 34.65628289872396 16.205401622667026 36 17.24611618771588 30.92238016574287 34.66718402550406 17.164319621037194 37 17.3129713498568 31.72555689130357 33.87246901373771 17.089002745101926 38 17.50088238141594 32.592082122838164 32.626233904638774 17.28080159110712 39 19.03931342721516 29.750165994430517 33.1497166850512 18.060803893303127 40 16.022750575358423 29.07460106068726 34.77749123145379 20.12515713250053 41 17.073222792350307 29.47557957022117 33.891526927688936 19.559670709739585 42 17.286061575357657 28.38737268360585 34.81301518305889 19.513550557977606 43 16.90581807620269 29.7097632168539 34.93971219500667 18.444706511936733 44 15.252963315040278 33.00815450022145 33.214666055797 18.524216128941273 45 17.127728426250826 30.866807288661075 34.32147346642872 17.683990818659375 46 16.888589721990773 30.629574375796143 33.329852087718244 19.151983814494837 47 16.2390960145328 29.107838062618207 36.02136315922277 18.63170276362622 48 16.755946640890205 28.172094487612735 35.77803171389345 19.293927157603612 49 17.08412391913041 30.571257159105375 34.28503473495397 18.059584186810245 50 15.650663863374579 30.30841040988999 34.41805897433356 19.62286675240187 51 15.727657835737553 28.58023877279231 35.92858923410817 19.763514157361957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1002.0 1 7256.5 2 13511.0 3 49693.0 4 85875.0 5 53433.5 6 20992.0 7 20645.5 8 20299.0 9 22325.5 10 24352.0 11 25473.0 12 26594.0 13 25860.0 14 25126.0 15 22613.5 16 20101.0 17 17476.0 18 14851.0 19 13078.5 20 11306.0 21 10864.5 22 10423.0 23 10104.5 24 9786.0 25 9550.5 26 10116.0 27 10917.0 28 12736.5 29 14556.0 30 17116.5 31 19677.0 32 21474.0 33 23271.0 34 28141.5 35 33012.0 36 37273.0 37 41534.0 38 46862.0 39 52190.0 40 59192.5 41 66195.0 42 76819.5 43 87444.0 44 96882.5 45 106321.0 46 109976.0 47 113631.0 48 106487.5 49 99344.0 50 91282.5 51 83221.0 52 75535.5 53 67850.0 54 61303.5 55 54757.0 56 49261.0 57 43765.0 58 38940.5 59 34116.0 60 28809.0 61 23502.0 62 19030.0 63 14558.0 64 12198.0 65 9838.0 66 8136.5 67 6435.0 68 5061.5 69 3688.0 70 3235.5 71 2783.0 72 2638.5 73 2494.0 74 1948.0 75 1121.5 76 841.0 77 624.0 78 407.0 79 282.0 80 157.0 81 139.0 82 121.0 83 93.0 84 65.0 85 69.5 86 74.0 87 50.5 88 27.0 89 36.5 90 46.0 91 30.5 92 15.0 93 9.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1311791.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.54494458982886 #Duplication Level Percentage of deduplicated Percentage of total 1 78.20842413971366 27.79914102503956 2 9.805570810013853 6.970769422271713 3 3.50155716097593 3.733879657950237 4 1.8195508881508977 2.5870334199079017 5 1.0812697134162865 1.9216836025021018 6 0.7262787062595532 1.5489321822461044 7 0.5625114048595695 1.399610570181613 8 0.42093377809365085 1.196965425466091 9 0.3227978595485814 1.0326448828232715 >10 2.8162366121192592 21.70803940483072 >50 0.5403309303058363 13.507114541804988 >100 0.19027476481522324 9.890936184546689 >500 0.0031413286414953413 0.7605528924598285 >1k 6.731418517490018E-4 0.4104242014050207 >5k 2.2438061724966725E-4 0.5552610357912464 >10k+ 2.2438061724966725E-4 4.977011550772931 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62403 4.7570840171948126 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6962 0.5307247877138965 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2777 0.21169530817028015 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09384116829586421 0.0 2 0.0 0.0 0.0 0.3072898045496577 0.0 3 0.0 0.0 0.0 0.5070167427585645 0.0 4 0.0 0.0 0.0 0.6337899863621568 0.0 5 0.0 0.0 0.0 1.3897030853238055 0.0 6 0.0 0.0 0.0 1.5922505947974943 0.0 7 0.0 0.0 0.0 2.18068274595572 0.0 8 0.0 0.0 0.0 2.88353861247714 0.0 9 0.0 0.0 0.0 3.429281036384607 0.0 10 0.0 0.0 0.0 3.836434310038718 0.0 11 0.0 0.0 0.0 4.267524323615576 0.0 12 0.0 0.0 0.0 4.620171963369165 0.0 13 0.0 0.0 0.0 4.7851372665310254 0.0 14 0.0 0.0 0.0 4.9163319461713035 0.0 15 0.0 0.0 0.0 5.38004910843267 0.0 16 0.0 0.0 0.0 5.900253927645486 0.0 17 0.0 0.0 0.0 6.499815900551231 0.0 18 0.0 0.0 0.0 6.853378320174479 0.0 19 0.0 0.0 0.0 7.246276274193069 0.0 20 0.0 0.0 0.0 7.69505203191667 0.0 21 0.0 0.0 0.0 8.1814099959521 0.0 22 1.5246331160985248E-4 0.0 0.0 8.658467697979328 0.0 23 1.5246331160985248E-4 0.0 0.0 9.062800400368657 0.0 24 0.0010672431812689673 0.0 0.0 9.42047932940537 0.0 25 0.0010672431812689673 0.0 0.0 9.762530769002074 0.0 26 0.0010672431812689673 0.0 0.0 10.140411086827093 0.0 27 0.0010672431812689673 0.0 0.0 10.501596672030834 0.0 28 0.0010672431812689673 0.0 0.0 10.8941134677704 0.0 29 0.0010672431812689673 0.0 0.0 11.333665195141604 0.0 30 0.0010672431812689673 0.0 0.0 11.773521849136028 0.0 31 0.0010672431812689673 0.0 0.0 12.160016344067005 0.0 32 0.0010672431812689673 0.0 0.0 12.575707563171267 0.0 33 0.0010672431812689673 0.0 0.0 13.003595847204318 0.0 34 0.0010672431812689673 0.0 0.0 13.464339974889292 0.0 35 0.0010672431812689673 0.0 0.0 13.8760671478917 0.0 36 0.0010672431812689673 0.0 0.0 14.287641857582496 0.0 37 0.0010672431812689673 0.0 0.0 14.733749507352924 0.0 38 0.0010672431812689673 0.0 0.0 15.189614809066383 0.0 39 0.0010672431812689673 0.0 0.0 15.66476671969849 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 30 2.165738E-6 45.000004 2 GTCATCG 30 2.165738E-6 45.000004 22 CGAACGG 30 2.165738E-6 45.000004 1 CGTGATA 30 2.165738E-6 45.000004 9 TAGCGGA 75 0.0 45.000004 2 CTGCGAC 30 2.165738E-6 45.000004 11 GTCGATA 20 7.033652E-4 45.0 28 CGGCCCA 20 7.033652E-4 45.0 5 CGACATC 35 1.2121018E-7 45.0 10 CGTTAGC 20 7.033652E-4 45.0 45 TAACCGC 20 7.033652E-4 45.0 21 TTAAGCG 25 3.8911086E-5 45.0 12 CGAATAA 25 3.8911086E-5 45.0 13 GCGATCG 20 7.033652E-4 45.0 8 ACGCTAA 35 1.2121018E-7 45.0 37 ACGTCAA 20 7.033652E-4 45.0 32 ACCGTGC 20 7.033652E-4 45.0 13 TTATTCG 20 7.033652E-4 45.0 35 TATCGAC 25 3.8911086E-5 45.0 26 TGTCGAT 20 7.033652E-4 45.0 27 >>END_MODULE