##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043432_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3099779 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52945774521345 31.0 31.0 33.0 30.0 34.0 2 30.578121859655155 31.0 31.0 34.0 26.0 34.0 3 31.560380917478312 31.0 31.0 34.0 28.0 34.0 4 35.17101283672159 37.0 35.0 37.0 32.0 37.0 5 35.496522171419315 37.0 35.0 37.0 33.0 37.0 6 35.75411343840964 37.0 35.0 37.0 35.0 37.0 7 33.756636521506856 37.0 35.0 37.0 32.0 37.0 8 34.74129123398797 37.0 35.0 37.0 31.0 37.0 9 36.74422402371266 39.0 37.0 39.0 32.0 39.0 10 36.72658018523256 39.0 35.0 39.0 32.0 39.0 11 36.556829373965044 39.0 35.0 39.0 32.0 39.0 12 36.55878757808218 39.0 35.0 39.0 33.0 39.0 13 36.586038230467395 39.0 35.0 39.0 33.0 39.0 14 37.85018544870457 40.0 36.0 41.0 33.0 41.0 15 37.932701008684816 40.0 36.0 41.0 33.0 41.0 16 37.786593173255255 40.0 36.0 41.0 33.0 41.0 17 37.762580171038 40.0 36.0 41.0 33.0 41.0 18 37.60286072007069 39.0 36.0 41.0 33.0 41.0 19 37.436917277005875 39.0 35.0 41.0 33.0 41.0 20 37.242171135426105 39.0 35.0 41.0 32.0 41.0 21 37.14165074348849 39.0 35.0 41.0 32.0 41.0 22 37.07032985254755 39.0 35.0 41.0 32.0 41.0 23 37.014504582423456 38.0 35.0 41.0 32.0 41.0 24 36.888290423285014 38.0 35.0 41.0 32.0 41.0 25 36.7907170156324 38.0 35.0 41.0 32.0 41.0 26 36.52551617389498 38.0 35.0 40.0 31.0 41.0 27 36.41920956300433 38.0 35.0 40.0 31.0 41.0 28 36.24413192037239 38.0 35.0 40.0 31.0 41.0 29 36.19175431538829 38.0 35.0 40.0 30.0 41.0 30 36.077541011794715 38.0 35.0 40.0 30.0 41.0 31 35.90157298310621 38.0 35.0 40.0 30.0 41.0 32 35.852017837400666 38.0 35.0 40.0 30.0 41.0 33 35.65855727134096 38.0 35.0 40.0 28.0 41.0 34 35.57085585778857 38.0 35.0 40.0 28.0 41.0 35 35.425809065743074 38.0 35.0 40.0 27.0 41.0 36 35.31392979951151 38.0 35.0 40.0 27.0 41.0 37 35.20457845543182 38.0 34.0 40.0 26.0 41.0 38 35.09040257386091 37.0 34.0 40.0 26.0 41.0 39 34.95438094135098 37.0 34.0 40.0 25.0 41.0 40 34.86333574103186 37.0 34.0 40.0 25.0 41.0 41 34.76219659530567 37.0 34.0 40.0 25.0 41.0 42 34.64068438427385 36.0 34.0 40.0 24.0 41.0 43 34.46847372022328 36.0 34.0 40.0 23.0 41.0 44 34.25481139139274 36.0 33.0 40.0 23.0 41.0 45 34.042192685349505 35.0 33.0 40.0 23.0 41.0 46 34.020687926461854 35.0 33.0 40.0 23.0 41.0 47 33.985397346068865 35.0 33.0 40.0 23.0 41.0 48 33.88081118040996 35.0 33.0 40.0 23.0 41.0 49 33.839506622891506 35.0 33.0 40.0 23.0 41.0 50 33.75517286877548 35.0 33.0 39.0 23.0 41.0 51 33.323627910247794 35.0 33.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 3.0 11 11.0 12 15.0 13 21.0 14 64.0 15 149.0 16 296.0 17 690.0 18 1467.0 19 2669.0 20 4508.0 21 7406.0 22 11638.0 23 16975.0 24 25800.0 25 38380.0 26 51007.0 27 60263.0 28 65906.0 29 70951.0 30 80433.0 31 94292.0 32 115556.0 33 151993.0 34 265521.0 35 308606.0 36 304421.0 37 349707.0 38 451604.0 39 619009.0 40 414.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.419917355398564 17.84365917699294 23.98767783122603 26.748745636382466 2 30.325613535674638 21.30119598848821 28.208881988038502 20.164308487798646 3 27.38788797523953 21.64160735329841 31.526570119998876 19.443934551463187 4 23.656170326981375 25.076561909736146 28.20381711083274 23.06345065244974 5 21.69522407887788 34.6865695909289 26.50543796831968 17.11276836187354 6 84.24055392336034 2.2544510431227516 12.052214044936752 1.4527809885801535 7 79.84156289851632 7.315263442974483 11.2240582312481 1.6191154272611048 8 78.47233625364906 4.23788276519068 14.115232085900317 3.174548895259952 9 41.7826561183878 22.61906413328176 20.623244431296552 14.97503531703389 10 29.01010039747995 19.773829037489445 29.72031231903952 21.495758245991084 11 26.168542983225578 16.99121130893525 37.055770750108316 19.784474957730858 12 22.206712155931115 20.13788724938133 37.40340843653693 20.25199215815063 13 18.263495558876937 24.33418640490177 37.612745940920306 19.789572095300986 14 18.062965133966003 21.288001499461735 39.115401452813245 21.533631913759013 15 22.00473001462362 16.677737348372254 39.34586949585761 21.971663141146514 16 21.903174387593438 18.249236477826322 34.128142683720355 25.719446450859884 17 22.0662827898376 22.20138919581041 33.807377880810215 21.924950133541778 18 23.880605681888934 24.864030629280347 30.947335277773032 20.30802841105769 19 25.144050591993818 22.016117923245496 30.487721866623396 22.35210961813729 20 25.240960726555024 23.670364887303254 32.555127317141 18.533547069000726 21 22.27229747669108 19.941615192566953 32.87556951640746 24.910517814334508 22 22.433179913793854 23.04754629281636 32.075060834982104 22.44421295840768 23 23.43734827547383 22.247489256492155 34.272862678274805 20.042299789759205 24 26.109022610966782 19.984973122277427 31.625770740430205 22.280233526325585 25 20.886553525267445 22.825788548151333 31.315619597397102 24.972038329184112 26 19.50903596675763 22.041635871460514 34.26137798855983 24.187950173222024 27 21.10856935284741 22.588416787132243 34.90058484814563 21.40242901187472 28 21.521824620400356 24.37744755351914 32.33285340664609 21.76787441943442 29 21.535567535621087 22.41501732865472 36.01979366916158 20.029621466562617 30 27.562222984283718 22.028925287899558 30.96985301210183 19.438998715714895 31 25.845229611530367 23.736305072071268 29.834836612545608 20.583628703852757 32 27.348369028888836 21.188220192471785 28.751565837435507 22.711844941203875 33 22.22103575771047 23.669784200744633 31.18486834061396 22.92431170093094 34 22.20729284248974 23.25869037760434 31.191384934216277 23.342631845689642 35 26.505212145769104 25.94981771281114 27.758204697818776 19.786765443600977 36 23.38686080523805 25.707445595315022 28.180589648487842 22.725103950959085 37 23.57332571128458 28.65313946574901 27.432471798795977 20.341063024170435 38 22.908246039475717 25.262478389588416 26.83936499989193 24.989910571043936 39 22.724652305857933 22.585674656160972 32.35427428858638 22.335398749394713 40 21.456819986199015 23.002026918693236 31.69693710422582 23.84421599088193 41 21.268903363755932 27.132224587623828 27.066897349778806 24.531974698841434 42 20.549239155436567 22.428695723146717 29.33125232476251 27.690812796654214 43 21.3285527774722 22.025376647819087 33.21811006526595 23.42796050944277 44 24.145624575171325 24.595301794095644 29.81254470076738 21.446528929965652 45 25.24234792222284 24.154915560109284 29.846805207726103 20.755931309941772 46 22.738266179621192 25.274543765862017 28.76005031326427 23.227139741252522 47 20.652633623235722 27.763656699396954 30.322000374865432 21.261709302501888 48 23.23888251388244 25.530691058943233 30.477946976219915 20.752479450954407 49 21.85788083602089 22.9319896676505 32.01657279438309 23.193556701945525 50 20.249120985721884 24.76495905030649 33.68520788094893 21.300712083022695 51 20.18682622212745 21.87672088881175 32.33549875652425 25.600954132536547 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1462.0 1 11590.0 2 21718.0 3 74681.5 4 127645.0 5 77510.5 6 27376.0 7 25143.0 8 22910.0 9 23223.5 10 23537.0 11 23496.0 12 23455.0 13 22641.0 14 21827.0 15 20418.5 16 19010.0 17 17439.5 18 15869.0 19 14617.0 20 13365.0 21 13667.5 22 13970.0 23 14047.5 24 14125.0 25 15416.0 26 19789.0 27 22871.0 28 23789.5 29 24708.0 30 30256.5 31 35805.0 32 41136.0 33 46467.0 34 53453.5 35 60440.0 36 67449.5 37 74459.0 38 79802.5 39 85146.0 40 95148.5 41 105151.0 42 113911.0 43 122671.0 44 134626.0 45 146581.0 46 156165.5 47 165750.0 48 190864.0 49 215978.0 50 209257.0 51 202536.0 52 179703.5 53 156871.0 54 157309.5 55 157748.0 56 164279.5 57 170811.0 58 174793.5 59 178776.0 60 173068.0 61 167360.0 62 161151.0 63 154942.0 64 144446.5 65 133951.0 66 113348.5 67 92746.0 68 79055.5 69 65365.0 70 57232.5 71 49100.0 72 46398.5 73 43697.0 74 36778.5 75 21576.5 76 13293.0 77 10116.5 78 6940.0 79 5444.5 80 3949.0 81 2749.5 82 1550.0 83 1210.0 84 870.0 85 556.5 86 243.0 87 171.0 88 99.0 89 75.0 90 51.0 91 31.0 92 11.0 93 7.5 94 4.0 95 2.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3099779.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.052720267063865 #Duplication Level Percentage of deduplicated Percentage of total 1 77.47258011025147 17.85953717649323 2 9.55538668944482 4.405553127907937 3 3.141090879959648 2.1723206816740572 4 1.5198682300210824 1.4014838859789396 5 0.9061494005321172 1.0444604325317255 6 0.6581674222937642 0.9103529685019583 7 0.44226415188071516 0.7136774244219461 8 0.3489892702119959 0.6436121617923123 9 0.28107765135030693 0.5831644022911739 >10 3.668202713844998 21.096185864105504 >50 1.4838845900153717 24.285418797797576 >100 0.5118837360570527 16.725542596600228 >500 0.005675655102760546 0.8991069380334534 >1k 0.003584624275427713 1.4073142832398169 >5k 5.974373792379522E-4 0.9552301069146439 >10k+ 5.974373792379522E-4 4.897039151715465 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 87984 2.838395898546316 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 30316 0.9780052061776018 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 13899 0.4483868043496004 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 10027 0.3234746735170475 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9614 0.3101511430331001 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6873 0.22172548430065497 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6009 0.19385252948677956 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 5247 0.16927013183843106 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3638 0.11736320557046165 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038938259792069045 0.0 2 0.0 0.0 0.0 0.1300092684026829 0.0 3 0.0 0.0 0.0 0.2064663319546329 0.0 4 0.0 0.0 0.0 0.25611503271684855 0.0 5 0.0 0.0 0.0 0.5499101710154175 0.0 6 0.0 0.0 0.0 0.6314966325018655 0.0 7 0.0 0.0 0.0 0.8864502921014692 0.0 8 0.0 0.0 0.0 1.1676316279321848 0.0 9 0.0 0.0 0.0 1.4159396524719987 0.0 10 0.0 0.0 0.0 1.5881777378322777 0.0 11 0.0 0.0 0.0 1.779255875983417 3.226036436791139E-5 12 0.0 0.0 0.0 1.9370413181068715 3.226036436791139E-5 13 0.0 0.0 0.0 2.0126273518208877 3.226036436791139E-5 14 0.0 0.0 0.0 2.0717928600716373 3.226036436791139E-5 15 0.0 0.0 0.0 2.2620322287492107 3.226036436791139E-5 16 0.0 0.0 0.0 2.479692907139509 3.226036436791139E-5 17 3.226036436791139E-5 0.0 0.0 2.761196846613904 3.226036436791139E-5 18 3.226036436791139E-5 0.0 0.0 2.915788512664935 6.452072873582278E-5 19 3.226036436791139E-5 0.0 0.0 3.0900590009803923 6.452072873582278E-5 20 3.226036436791139E-5 0.0 0.0 3.291912100830414 6.452072873582278E-5 21 3.226036436791139E-5 0.0 0.0 3.494087804324115 6.452072873582278E-5 22 3.226036436791139E-5 0.0 0.0 3.709651559030499 6.452072873582278E-5 23 6.452072873582278E-5 0.0 0.0 3.8932452926482823 6.452072873582278E-5 24 1.6130182183955694E-4 0.0 0.0 4.0500629238406995 6.452072873582278E-5 25 1.6130182183955694E-4 0.0 0.0 4.208267750700937 6.452072873582278E-5 26 1.6130182183955694E-4 0.0 0.0 4.3731827333497 6.452072873582278E-5 27 1.6130182183955694E-4 0.0 0.0 4.557324893161739 6.452072873582278E-5 28 1.6130182183955694E-4 0.0 0.0 4.744918911961143 6.452072873582278E-5 29 1.6130182183955694E-4 0.0 0.0 4.945739680151392 6.452072873582278E-5 30 1.6130182183955694E-4 0.0 0.0 5.145108731945084 6.452072873582278E-5 31 1.6130182183955694E-4 0.0 0.0 5.34257442224107 6.452072873582278E-5 32 1.6130182183955694E-4 0.0 0.0 5.56652587168311 6.452072873582278E-5 33 1.6130182183955694E-4 0.0 0.0 5.781928324567654 6.452072873582278E-5 34 1.6130182183955694E-4 0.0 0.0 6.044172826514407 6.452072873582278E-5 35 1.6130182183955694E-4 0.0 0.0 6.263994949317355 6.452072873582278E-5 36 1.6130182183955694E-4 0.0 0.0 6.497076081875514 6.452072873582278E-5 37 1.6130182183955694E-4 0.0 0.0 6.765869437788952 6.452072873582278E-5 38 1.6130182183955694E-4 0.0 0.0 7.04995420641278 6.452072873582278E-5 39 1.6130182183955694E-4 0.0 0.0 7.397720934298865 6.452072873582278E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGA 25 3.8923434E-5 45.0 1 CTTACCG 20 7.0351415E-4 45.0 38 CGTTTTT 23205 0.0 44.04977 1 TAGTAGG 735 0.0 42.551018 1 ACTACGG 175 0.0 42.42857 1 GACGGTC 1185 0.0 41.96203 28 TATACGG 280 0.0 41.785717 1 CGACGGT 1190 0.0 41.785713 27 CGGTCTA 1205 0.0 41.452282 30 TACGGGT 235 0.0 41.17021 3 TAGGGTA 1690 0.0 41.00592 4 CTAACCT 1250 0.0 40.859997 14 TCACGAC 1235 0.0 40.627533 24 GCGCGAC 4005 0.0 40.449436 8 CACTTAC 10465 0.0 40.42045 36 CATATGC 2495 0.0 40.31062 32 TAGCATA 2540 0.0 40.03937 29 CGCACTT 10510 0.0 40.0333 34 ACTTACT 10530 0.0 40.02137 37 GCACTTA 10540 0.0 39.87666 35 >>END_MODULE