##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043425_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 906367 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.467732165888652 31.0 31.0 33.0 30.0 34.0 2 30.512213043943568 31.0 31.0 34.0 26.0 34.0 3 31.377168409706 31.0 31.0 34.0 28.0 34.0 4 35.011841781529995 37.0 35.0 37.0 32.0 37.0 5 35.3155101631017 37.0 35.0 37.0 33.0 37.0 6 35.79486565596497 37.0 35.0 37.0 35.0 37.0 7 33.80937302439299 37.0 35.0 37.0 32.0 37.0 8 34.79390467658244 37.0 35.0 37.0 31.0 37.0 9 36.7277317025002 39.0 37.0 39.0 32.0 39.0 10 36.683539890574124 39.0 35.0 39.0 32.0 39.0 11 36.40196079513045 38.0 35.0 39.0 32.0 39.0 12 36.27484010340182 39.0 35.0 39.0 32.0 39.0 13 36.32147684105887 39.0 35.0 39.0 32.0 39.0 14 37.68650226674184 40.0 36.0 41.0 33.0 41.0 15 37.8296164798586 40.0 36.0 41.0 33.0 41.0 16 37.802144164560275 40.0 36.0 41.0 33.0 41.0 17 37.7524380300695 40.0 36.0 41.0 33.0 41.0 18 37.44265843747621 39.0 36.0 41.0 33.0 41.0 19 37.09225843394563 38.0 35.0 40.0 33.0 41.0 20 36.75135458373926 38.0 35.0 40.0 32.0 41.0 21 36.63837827281885 38.0 35.0 40.0 32.0 41.0 22 36.55316113671394 37.0 35.0 40.0 32.0 41.0 23 36.44444358631768 37.0 35.0 40.0 32.0 41.0 24 36.23393614286486 37.0 35.0 40.0 32.0 41.0 25 36.12037176993425 36.0 35.0 40.0 31.0 41.0 26 35.86449970045246 36.0 35.0 40.0 31.0 41.0 27 35.76558060917928 36.0 35.0 40.0 31.0 41.0 28 35.64796820713905 36.0 35.0 40.0 31.0 41.0 29 35.56909176966946 36.0 35.0 40.0 31.0 41.0 30 35.366748789397676 35.0 35.0 40.0 30.0 41.0 31 34.8948152348883 35.0 34.0 40.0 27.0 41.0 32 34.713470371273445 35.0 34.0 40.0 25.0 41.0 33 34.54235204944575 35.0 34.0 40.0 25.0 41.0 34 34.355598780626394 35.0 34.0 40.0 23.0 41.0 35 34.1183527202557 35.0 34.0 40.0 22.0 41.0 36 33.889765404080244 35.0 33.0 40.0 21.0 41.0 37 33.8213339629532 35.0 33.0 40.0 21.0 41.0 38 33.71270136710626 35.0 33.0 40.0 21.0 41.0 39 33.53975486750952 35.0 33.0 40.0 20.0 41.0 40 33.47875970771222 35.0 33.0 40.0 20.0 41.0 41 33.41879724217674 35.0 33.0 40.0 20.0 41.0 42 33.33050519270891 35.0 33.0 40.0 18.0 41.0 43 33.16463088351628 35.0 33.0 40.0 18.0 41.0 44 32.96253504375159 35.0 33.0 39.0 18.0 41.0 45 32.80517494568977 35.0 33.0 39.0 18.0 41.0 46 32.80743120612291 35.0 33.0 39.0 18.0 41.0 47 32.76936715480595 35.0 33.0 39.0 18.0 41.0 48 32.67832897711413 35.0 33.0 39.0 18.0 41.0 49 32.601504688498146 35.0 33.0 39.0 17.0 41.0 50 32.47719301342613 35.0 32.0 39.0 15.0 41.0 51 32.06653154847871 35.0 31.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 6.0 12 7.0 13 9.0 14 24.0 15 45.0 16 118.0 17 294.0 18 547.0 19 1136.0 20 1779.0 21 3003.0 22 4706.0 23 7073.0 24 11206.0 25 16582.0 26 20794.0 27 22456.0 28 22743.0 29 23420.0 30 25882.0 31 30190.0 32 36443.0 33 47554.0 34 80212.0 35 117465.0 36 114068.0 37 80165.0 38 97843.0 39 140528.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.702465998872423 17.66160948048638 25.4776486787361 32.1582758419051 2 33.77086765074192 20.072774052894687 28.94875916709236 17.207599129271035 3 20.15541165995673 21.438225354630077 40.551895644920876 17.854467340492317 4 21.70489437501586 24.092668863716355 37.65373187682252 16.548704884445264 5 18.51733348632508 29.75726168318132 36.105352467598664 15.620052362894942 6 74.95915010144897 2.045639349181954 21.31178650590765 1.6834240434614234 7 71.9168945912638 7.155489994671033 19.236247568589764 1.691367845475398 8 70.72433131391588 3.822844388641687 22.59978573800679 2.853038559435637 9 39.14661500253209 21.878885705238606 28.310607071969745 10.663892220259562 10 28.7413376700608 24.143972585056606 36.373014463236196 10.741675281646398 11 26.38224913307744 21.662417100357803 39.049634419611486 12.905699346953275 12 17.697025597798685 30.695512965498523 37.690471961137156 13.91698947556564 13 12.99881835945042 33.38106969913953 37.792086428565916 15.828025512844135 14 12.454447260326114 25.697868523456833 46.303208303038396 15.544475913178657 15 13.73571632683008 23.502289911261112 46.606396746571754 16.155597015337055 16 15.567645335719416 24.959646589074843 36.85615208850278 22.616555986702956 17 16.87285613884883 25.011612293916265 41.17912501227428 16.93640655496063 18 20.203405463791157 27.353047937535237 36.79326365589215 15.650282942781457 19 20.073656697562907 26.636009475190512 37.24539838718753 16.04493544005905 20 16.2692375163703 30.00793276895562 38.0543422256106 15.668487489063482 21 16.29328958357928 27.31134297696187 36.26047726803822 20.13489017142063 22 13.680551035066369 30.276146417510784 36.942430604821226 19.100871942601614 23 13.278285727525386 27.062768172274588 44.74776773646878 14.911178363731247 24 13.985284106769114 27.82901407487254 42.223403985361344 15.962297832997008 25 13.284353909619393 31.936732030182036 37.79517568490468 16.983738375293893 26 13.43649978430371 32.56043081886256 38.0064587523597 15.996610644474037 27 13.942586170943999 29.819267471123727 41.68763867175217 14.5505076861801 28 13.364012590926192 27.232235948572708 40.74221590150568 18.661535558995418 29 15.329220944716655 30.840928674587666 38.53913480963009 15.290715571065583 30 19.281262446668954 29.771494328456356 35.83206361220124 15.115179612673455 31 19.54649716946888 28.292402525687717 36.7798033247018 15.381296980141599 32 18.713721925003888 30.6157439536082 34.49750487385353 16.173029247534387 33 15.254306478501533 30.812573714621116 35.076961098539556 18.85615870833779 34 16.4285548789839 28.964757101703835 37.324174423826115 17.282513595486154 35 21.168025755571417 29.258126123303253 34.35208916476438 15.221758956360945 36 16.87351812235 32.23374196103786 35.71853344175152 15.174206474860624 37 17.44381690860325 31.995207239451567 34.74828629021136 15.812689561733823 38 17.3164954152126 32.17890766102473 33.77086765074192 16.733729273020753 39 19.47147237267023 28.969170325044928 34.674806121582094 16.88455118070274 40 15.300314331832471 29.287363727938022 35.60169335379598 19.81062858643353 41 17.191049541741922 29.14073438243008 32.95883455598008 20.70938151984792 42 16.71751067724222 28.775540150954303 35.09450366132042 19.41244551048306 43 16.828834236021393 30.370810058177316 34.967954482014456 17.83240122378683 44 14.813977119643587 35.10299911625203 32.732325867998284 17.3506978961061 45 17.345512358680317 32.346058495068775 33.692863928188025 16.61556521806288 46 17.332162358073496 30.692092717409174 33.190087459053565 18.78565746546377 47 16.08432345837834 30.064753019472246 36.0568070108466 17.794116511302814 48 16.775544564177647 28.728318661204565 36.32733760165584 18.168799172961947 49 17.38324541824669 30.460839814335692 34.54582966943854 17.610085097979074 50 15.788747825108373 30.78157082064991 34.28743544281731 19.142245911424403 51 15.09311349596797 28.151951692857306 36.41129917572022 20.34363563545451 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1235.0 1 6599.5 2 11964.0 3 47874.5 4 83785.0 5 48594.5 6 13404.0 7 13498.0 8 13592.0 9 16289.0 10 18986.0 11 21727.0 12 24468.0 13 23769.5 14 23071.0 15 20463.5 16 17856.0 17 15250.5 18 12645.0 19 10954.5 20 9264.0 21 8589.0 22 7914.0 23 7190.5 24 6467.0 25 6296.5 26 6718.5 27 7311.0 28 8210.0 29 9109.0 30 10469.5 31 11830.0 32 13244.0 33 14658.0 34 16991.5 35 19325.0 36 22421.5 37 25518.0 38 27004.0 39 28490.0 40 32950.0 41 37410.0 42 45456.5 43 53503.0 44 56957.0 45 60411.0 46 60898.5 47 61386.0 48 61842.0 49 62298.0 50 62760.5 51 63223.0 52 59521.0 53 55819.0 54 48593.0 55 41367.0 56 36785.0 57 32203.0 58 27314.0 59 22425.0 60 18799.0 61 15173.0 62 12778.0 63 10383.0 64 8617.0 65 6851.0 66 5563.0 67 4275.0 68 3897.0 69 3519.0 70 3144.5 71 2770.0 72 2711.0 73 2652.0 74 2190.5 75 1336.0 76 943.0 77 741.0 78 539.0 79 397.0 80 255.0 81 193.5 82 132.0 83 81.0 84 30.0 85 25.5 86 21.0 87 15.5 88 10.0 89 9.5 90 9.0 91 7.5 92 6.0 93 6.0 94 6.0 95 3.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 906367.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.08630467977497 #Duplication Level Percentage of deduplicated Percentage of total 1 78.91901077299244 27.68976457007656 2 9.147735796389249 6.419204905643943 3 3.379421594857922 3.5571424715578828 4 1.790168516419451 2.5124159198093436 5 1.183267104750449 2.075823507741473 6 0.7961190922745667 1.6759726219758797 7 0.5816359704593924 1.4285219810578387 8 0.4196453352583615 1.177904327225695 9 0.33571457412386635 1.0601085449835785 >10 2.752294743505425 21.19302888697098 >50 0.5494106115587309 13.26030460819361 >100 0.14036511739101312 7.475553778415374 >500 0.0026053850095778567 0.6924559918253159 >1k 0.0019540387571833928 1.0488537209512498 >5k 3.256731261972321E-4 0.8008950572118216 >10k+ 3.256731261972321E-4 7.932049106359399 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 69417 7.658818116723137 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7009 0.7733070599437094 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2847 0.3141111713025739 No Hit GTAATGGGTTTACCTGGCTTCCTTCTTGGTACATAGGCTACTCTTCCACAC 1765 0.19473347992590198 No Hit TTAGGCGGGATAAAATTTCAATTAATTCCATAATTTACACCAACTTCCTAA 1274 0.14056116341393718 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1219 0.1344929813199289 No Hit CCTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGC 1040 0.11474380686852013 No Hit CTGTCTCTTATACACATCTGACGCGCTGAGGTTCGTATGCCGTCTTCTGCT 1034 0.1140818233673556 Illumina Single End Adapter 1 (95% over 21bp) GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 949 0.10470372376752463 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 929 0.10249711209697618 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12312893121660431 0.0 2 0.0 0.0 0.0 0.40270662987509476 0.0 3 0.0 0.0 0.0 0.6373797810379239 0.0 4 0.0 0.0 0.0 0.7936078873127552 0.0 5 0.0 0.0 0.0 1.7000839615740644 0.0 6 0.0 0.0 0.0 1.9499827332636779 0.0 7 0.0 0.0 0.0 2.697693097829025 0.0 8 0.0 0.0 0.0 3.571069997032107 0.0 9 0.0 0.0 0.0 4.2323915146954825 0.0 10 0.0 0.0 0.0 4.683864262489698 0.0 11 0.0 0.0 0.0 5.182006847116014 0.0 12 0.0 0.0 0.0 5.59276760958861 0.0 13 0.0 0.0 0.0 5.7584841460468 0.0 14 0.0 0.0 0.0 5.899376301211319 0.0 15 0.0 0.0 0.0 6.367177975367594 0.0 16 0.0 0.0 0.0 6.909894115738989 0.0 17 0.0 0.0 0.0 7.590082163185553 0.0 18 0.0 0.0 0.0 7.9078342437445315 0.0 19 0.0 0.0 0.0 8.299176823516301 0.0 20 0.0 0.0 0.0 8.72185328900986 0.0 21 0.0 0.0 0.0 9.131731406814238 0.0 22 1.1033058352742322E-4 0.0 0.0 9.546574400877349 0.0 23 1.1033058352742322E-4 0.0 0.0 9.868850035360952 0.0 24 6.619835011645393E-4 0.0 0.0 10.155047569031089 0.0 25 6.619835011645393E-4 0.0 0.0 10.437604193444818 0.0 26 6.619835011645393E-4 0.0 0.0 10.754142637584996 0.0 27 6.619835011645393E-4 0.0 0.0 11.056558767033662 0.0 28 6.619835011645393E-4 0.0 0.0 11.364050103324592 0.0 29 6.619835011645393E-4 0.0 0.0 11.743366649491872 0.0 30 6.619835011645393E-4 0.0 0.0 12.092342285189112 0.0 31 6.619835011645393E-4 0.0 0.0 12.41185965508453 0.0 32 6.619835011645393E-4 0.0 0.0 12.737003884739845 0.0 33 6.619835011645393E-4 0.0 0.0 13.078918363091331 0.0 34 6.619835011645393E-4 0.0 0.0 13.483941935220502 0.0 35 6.619835011645393E-4 0.0 0.0 13.832917570917742 0.0 36 6.619835011645393E-4 0.0 0.0 14.171301470596347 0.0 37 6.619835011645393E-4 0.0 0.0 14.535944049154482 0.0 38 6.619835011645393E-4 0.0 0.0 14.899372991293813 0.0 39 6.619835011645393E-4 0.0 0.0 15.276372595207018 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 145 0.0 45.000004 1 CGGTTAC 35 1.2115561E-7 45.000004 19 TAAACGG 90 0.0 45.000004 1 CATCGAA 35 1.2115561E-7 45.000004 13 ACGTAGG 55 1.8189894E-12 45.000004 1 TATCGTC 35 1.2115561E-7 45.000004 11 TACCGTA 35 1.2115561E-7 45.000004 23 CAGCGCG 20 7.0324965E-4 45.0 27 TCGTTAC 20 7.0324965E-4 45.0 33 CACGCGT 20 7.0324965E-4 45.0 14 TCGGGCA 50 2.1827873E-11 45.0 4 GCACGAT 20 7.0324965E-4 45.0 40 CACGACC 20 7.0324965E-4 45.0 26 CGACAAG 20 7.0324965E-4 45.0 27 AACGGCC 25 3.8901508E-5 45.0 5 AGGCCGC 20 7.0324965E-4 45.0 35 GTTCGCG 20 7.0324965E-4 45.0 33 CTTGCGG 190 0.0 45.0 1 GCGATAA 50 2.1827873E-11 45.0 8 CCGGTTA 20 7.0324965E-4 45.0 29 >>END_MODULE