##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043420_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3455155 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.61875747976574 31.0 31.0 33.0 30.0 34.0 2 30.64754750510469 31.0 31.0 34.0 26.0 34.0 3 31.64453722047202 31.0 31.0 34.0 28.0 34.0 4 35.25613293759614 37.0 35.0 37.0 33.0 37.0 5 35.58403776386298 37.0 35.0 37.0 33.0 37.0 6 35.81914993683351 37.0 35.0 37.0 35.0 37.0 7 33.74043306306085 37.0 35.0 37.0 32.0 37.0 8 34.77461503174243 37.0 35.0 37.0 32.0 37.0 9 36.84340847226825 39.0 37.0 39.0 32.0 39.0 10 36.81968565809638 39.0 35.0 39.0 33.0 39.0 11 36.61412092945179 39.0 35.0 39.0 33.0 39.0 12 36.60071950462425 39.0 35.0 39.0 33.0 39.0 13 36.65276782083583 39.0 35.0 39.0 33.0 39.0 14 37.866482690356875 40.0 36.0 41.0 33.0 41.0 15 37.9542558872178 40.0 36.0 41.0 33.0 41.0 16 37.79335919806781 40.0 36.0 41.0 33.0 41.0 17 37.740312663252446 40.0 36.0 41.0 33.0 41.0 18 37.58142572475041 39.0 36.0 41.0 33.0 41.0 19 37.455651338362536 39.0 35.0 41.0 33.0 41.0 20 37.21612749645095 39.0 35.0 41.0 32.0 41.0 21 37.12889870353139 39.0 35.0 41.0 32.0 41.0 22 37.0652459875172 39.0 35.0 41.0 32.0 41.0 23 37.026066558519084 38.0 35.0 41.0 32.0 41.0 24 36.91590247036674 38.0 35.0 41.0 32.0 41.0 25 36.83628664994769 38.0 35.0 40.0 32.0 41.0 26 36.56118784830203 38.0 35.0 40.0 31.0 41.0 27 36.438283666000515 38.0 35.0 40.0 31.0 41.0 28 36.2722746157553 38.0 35.0 40.0 31.0 41.0 29 36.18439375368109 38.0 35.0 40.0 31.0 41.0 30 36.04398181847124 38.0 35.0 40.0 30.0 41.0 31 35.89084889100489 38.0 35.0 40.0 30.0 41.0 32 35.83064522430976 38.0 35.0 40.0 30.0 41.0 33 35.566594262775475 38.0 35.0 40.0 28.0 41.0 34 35.46764993176862 38.0 35.0 40.0 28.0 41.0 35 35.328446046559414 38.0 34.0 40.0 27.0 41.0 36 35.242635424459976 37.0 34.0 40.0 27.0 41.0 37 35.13743696013638 37.0 34.0 40.0 27.0 41.0 38 35.03269723065969 37.0 34.0 40.0 26.0 41.0 39 34.897945244135215 37.0 34.0 40.0 26.0 41.0 40 34.79328828952681 36.0 34.0 40.0 26.0 41.0 41 34.68171500265545 36.0 34.0 40.0 25.0 41.0 42 34.578234550982515 36.0 34.0 40.0 25.0 41.0 43 34.40582781380285 36.0 34.0 40.0 24.0 41.0 44 34.189744309589585 35.0 33.0 40.0 23.0 41.0 45 33.96154268042968 35.0 33.0 40.0 23.0 41.0 46 33.96213744390628 35.0 33.0 40.0 23.0 41.0 47 33.91860162568683 35.0 33.0 39.0 23.0 41.0 48 33.825092072569824 35.0 33.0 39.0 23.0 41.0 49 33.76648370333603 35.0 33.0 39.0 23.0 41.0 50 33.68590584214022 35.0 33.0 39.0 23.0 41.0 51 33.259519182207455 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 1.0 10 1.0 11 9.0 12 13.0 13 30.0 14 60.0 15 129.0 16 328.0 17 641.0 18 1394.0 19 2587.0 20 4535.0 21 7458.0 22 11509.0 23 17618.0 24 26885.0 25 40329.0 26 54538.0 27 64506.0 28 71077.0 29 76945.0 30 87730.0 31 104260.0 32 129342.0 33 177422.0 34 325520.0 35 351291.0 36 352684.0 37 410146.0 38 501998.0 39 633720.0 40 446.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.6526045864802 17.71622401889351 24.39441935311151 27.236752041514777 2 30.30816273076027 21.442887511558816 27.791604139322256 20.457345618358655 3 27.66023521376031 21.861276845756556 31.092121771671604 19.38636616881153 4 24.619474379586446 25.2806892889031 27.50493103782609 22.594905293684363 5 23.013352512405376 34.31122482204127 25.83284975637851 16.84257290917484 6 84.73006276129436 2.1979042908349986 11.733858538907805 1.3381744089628396 7 80.02422467298862 7.478969829139357 11.051660489905663 1.4451450079663575 8 79.71572910621954 3.7205856177219254 13.60338392923038 2.960301346828145 9 46.70215952685191 18.24743028894507 20.064483358923116 14.985926825279908 10 30.647944882356942 18.934259099808838 27.115918099188026 23.3018779186462 11 25.88483005827524 16.130795868781576 36.4523443955481 21.53202967739508 12 22.395666764587986 18.342245138061823 37.61622850494406 21.64585959240613 13 19.26107511819296 22.37505987430376 38.81000997060913 19.55385503689415 14 18.45375967214206 19.092341732860028 40.5499319133295 21.903966681668404 15 23.122175416153546 15.650962113132408 39.13231099617818 22.094551474535876 16 24.142968984025316 16.048860326092463 33.965827871687374 25.84234281819484 17 23.214877480170934 20.0902419717784 34.40699476579198 22.28788578225868 18 25.627214987460768 22.532650488907155 30.565546263481668 21.274588260150413 19 27.31220451759762 20.742108530586904 29.31306989122051 22.632617060594967 20 26.86472821045655 21.916411854171518 32.763074304915406 18.45578563045652 21 24.69165638010451 17.99901885733057 32.24060859787766 25.068716164687256 22 24.7244190202755 20.858195942005498 31.294978083472376 23.122406954246628 23 25.10700677683056 19.982055797786206 33.29679855172923 21.614138873654003 24 27.75536842775505 17.84209391474478 31.550596138234035 22.851941519266138 25 22.347391072180553 20.29234578477666 30.74990847009758 26.610354672945206 26 20.617280556154498 20.334109468316182 33.6413561764957 25.40725379903362 27 21.891376797857117 21.18440417289528 34.207872005742146 22.716347023505456 28 23.602182825372523 22.676667182803666 31.166908575736834 22.554241416086978 29 22.901027594999356 20.525851951649056 34.623106633421656 21.950013819929932 30 28.56317589225375 20.63548523872301 29.876199475855643 20.925139393167598 31 28.72756793834141 21.02611894401264 28.90020852899508 21.34610458865087 32 29.336860430284606 19.4856381262201 27.725500013747574 23.452001429747725 33 23.890447751258627 22.506660337958788 31.336770709273537 22.266121201509048 34 24.704043668084356 22.190900263519293 30.521814506150953 22.583241562245398 35 28.635184239202005 24.41195836366241 27.410174073232607 19.542683323902978 36 24.923686491633514 24.53892806545582 27.75739438606951 22.779991056841155 37 25.578360449820632 28.245129379145073 25.36676357500604 20.80974659602825 38 24.549260452859567 23.72258263377475 26.444486571514158 25.283670341851522 39 24.024132057751387 21.529540642894457 31.526255696198866 22.920071603155286 40 21.97282032209843 22.120454798699335 31.35268895317287 24.554035926029368 41 22.666942582894258 26.40437259688784 26.387528200616178 24.541156619601725 42 21.683600301578366 21.145679426827453 28.71989823900809 28.450822032586093 43 22.75238013924122 20.13041383092799 32.43246685025708 24.684739179573707 44 25.070423758123734 22.83171087838317 29.663039718912753 22.434825644580343 45 25.304913961891724 23.029531236659427 29.36583163418139 22.29972316726746 46 23.72747387599109 24.2350053760251 28.500950029738174 23.536570718245635 47 22.372744493372945 26.233323830624094 29.930813523561174 21.463118152441787 48 24.366982089081386 24.874687242685205 29.63537091678955 21.122959751443858 49 23.05607129057886 22.660488458549615 31.298566923915132 22.984873326956386 50 21.878960567615636 23.51321431310607 32.54496542123292 22.062859698045383 51 21.563460973530855 20.226907331219586 32.35498841585978 25.854643279389784 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1664.0 1 12926.0 2 24188.0 3 80739.0 4 137290.0 5 83533.5 6 29777.0 7 27072.5 8 24368.0 9 24305.5 10 24243.0 11 23993.0 12 23743.0 13 22945.0 14 22147.0 15 20561.0 16 18975.0 17 17825.0 18 16675.0 19 15760.0 20 14845.0 21 14846.0 22 14847.0 23 14535.5 24 14224.0 25 14709.5 26 17343.0 27 19491.0 28 20271.5 29 21052.0 30 25613.0 31 30174.0 32 33906.5 33 37639.0 34 44540.5 35 51442.0 36 55233.5 37 59025.0 38 62577.0 39 66129.0 40 77840.5 41 89552.0 42 107346.5 43 125141.0 44 138562.5 45 151984.0 46 165279.0 47 178574.0 48 200835.5 49 223097.0 50 210790.5 51 198484.0 52 181633.0 53 164782.0 54 170996.5 55 177211.0 56 189678.5 57 202146.0 58 209575.5 59 217005.0 60 216465.5 61 215926.0 62 213075.5 63 210225.0 64 200507.0 65 190789.0 66 164777.5 67 138766.0 68 116104.5 69 93443.0 70 81127.5 71 68812.0 72 63596.5 73 58381.0 74 48862.5 75 30630.0 76 21916.0 77 16334.5 78 10753.0 79 8344.5 80 5936.0 81 4640.5 82 3345.0 83 2416.5 84 1488.0 85 987.0 86 486.0 87 362.5 88 239.0 89 174.0 90 109.0 91 78.0 92 47.0 93 38.0 94 29.0 95 19.5 96 10.0 97 6.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3455155.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.244542016159848 #Duplication Level Percentage of deduplicated Percentage of total 1 77.46849175361055 17.232511197417224 2 9.475670594737334 4.215639053518499 3 3.1145151375768942 2.0784288851338526 4 1.4771132027269722 1.3143082680273828 5 0.8663975659359009 0.9636308529079883 6 0.5465941908437677 0.7295242466407851 7 0.41522374980079696 0.646552350398589 8 0.3474419348587786 0.6182949374513578 9 0.2599485569437707 0.5204192937278246 >10 3.8517082775898723 21.95570199283044 >50 1.649778101031947 25.92633029557033 >100 0.5171410193031133 16.302800307889083 >500 0.006041751362481465 0.9328957140065451 >1k 0.0029506227584211804 1.2065009498820911 >5k 2.810116912782077E-4 0.34480385677164993 >10k+ 7.025292281955193E-4 5.011657797826371 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 92024 2.6633826847131314 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 34013 0.9844131449963895 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 13330 0.38580034759656223 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 10965 0.31735189882943027 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10016 0.289885692537672 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5686 0.16456569965746834 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5346 0.154725330701517 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 4334 0.12543576192674424 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4090 0.11837385008776741 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.034730713962181144 0.0 2 0.0 0.0 0.0 0.11710039057582076 0.0 3 0.0 0.0 0.0 0.18155480723730194 0.0 4 0.0 0.0 0.0 0.22786242585354347 0.0 5 0.0 0.0 0.0 0.5115834166629283 0.0 6 0.0 0.0 0.0 0.5898432921243765 0.0 7 0.0 0.0 0.0 0.8239283042294774 0.0 8 0.0 0.0 0.0 1.0854505803647014 0.0 9 0.0 0.0 0.0 1.3008099491918597 0.0 10 0.0 0.0 0.0 1.4689934315537219 0.0 11 0.0 0.0 0.0 1.6447887287256289 0.0 12 0.0 0.0 0.0 1.7953463737516842 0.0 13 0.0 0.0 0.0 1.8758348033590388 0.0 14 0.0 0.0 0.0 1.9328800010419214 0.0 15 0.0 0.0 0.0 2.117792110628901 0.0 16 0.0 0.0 0.0 2.3211114986158363 0.0 17 0.0 0.0 0.0 2.588885303264253 0.0 18 0.0 0.0 0.0 2.7412373685116878 0.0 19 0.0 0.0 0.0 2.9126334419150517 0.0 20 0.0 0.0 0.0 3.113840044802621 0.0 21 0.0 0.0 0.0 3.3080426203744837 0.0 22 5.788452327030191E-5 0.0 0.0 3.5155875785601514 0.0 23 5.788452327030191E-5 0.0 0.0 3.7050146809622144 0.0 24 1.4471130817575478E-4 0.0 0.0 3.8641392354322743 0.0 25 1.4471130817575478E-4 0.0 0.0 4.025347632740065 0.0 26 1.4471130817575478E-4 0.0 0.0 4.183111900913273 0.0 27 1.4471130817575478E-4 0.0 0.0 4.3607016183065594 0.0 28 1.4471130817575478E-4 0.0 0.0 4.539275372595441 0.0 29 1.4471130817575478E-4 0.0 0.0 4.732146604132087 0.0 30 1.4471130817575478E-4 0.0 0.0 4.922499858906474 0.0 31 1.4471130817575478E-4 0.0 0.0 5.112997824989038 0.0 32 1.4471130817575478E-4 0.0 0.0 5.341844287738176 0.0 33 1.4471130817575478E-4 0.0 0.0 5.552891259581697 0.0 34 1.4471130817575478E-4 0.0 0.0 5.806049222104363 0.0 35 1.4471130817575478E-4 0.0 0.0 6.0187748451227225 0.0 36 1.4471130817575478E-4 0.0 0.0 6.26762041066175 0.0 37 1.4471130817575478E-4 0.0 0.0 6.538288441473682 0.0 38 1.4471130817575478E-4 0.0 0.0 6.8375803690427785 0.0 39 1.4471130817575478E-4 0.0 0.0 7.196203932963933 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGTT 25 3.8924372E-5 45.0 21 CGTTTTT 25610 0.0 43.629444 1 ACGTAGG 265 0.0 43.301888 1 CACGACG 1145 0.0 43.231438 25 CGACGGT 1160 0.0 42.672417 27 CGGGTAC 910 0.0 42.52747 5 ACGGGTA 435 0.0 41.896553 4 CACTTAC 10150 0.0 41.80788 36 GGTACCT 3940 0.0 41.459393 7 ACTTACT 10225 0.0 41.391197 37 CGCACTT 10310 0.0 41.311832 34 ACTACGG 180 0.0 41.25 1 AGGGTAC 1775 0.0 41.19718 5 CTTACTG 10290 0.0 41.086006 38 GCACTTA 10350 0.0 41.04348 35 CATATGC 3865 0.0 41.0414 32 CGGTCTA 1205 0.0 40.892117 30 ACCCGCA 10440 0.0 40.86207 31 CCCGCAC 10505 0.0 40.823418 32 CCGCACT 10430 0.0 40.81496 33 >>END_MODULE