##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043415_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 848265 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.54652260791144 31.0 31.0 33.0 30.0 34.0 2 30.590570163804944 31.0 31.0 34.0 26.0 34.0 3 31.50104507435766 31.0 31.0 34.0 28.0 34.0 4 35.10257879318373 37.0 35.0 37.0 32.0 37.0 5 35.41053562271224 37.0 35.0 37.0 33.0 37.0 6 35.83141824783529 37.0 35.0 37.0 35.0 37.0 7 33.778103540756724 37.0 35.0 37.0 32.0 37.0 8 34.79515599488367 37.0 35.0 37.0 32.0 37.0 9 36.74408940602288 39.0 37.0 39.0 32.0 39.0 10 36.709777015437396 39.0 35.0 39.0 32.0 39.0 11 36.49770413726842 39.0 35.0 39.0 32.0 39.0 12 36.384719397829684 39.0 35.0 39.0 32.0 39.0 13 36.43872021125474 39.0 35.0 39.0 32.0 39.0 14 37.78629319846982 40.0 36.0 41.0 33.0 41.0 15 37.944636404897054 40.0 36.0 41.0 33.0 41.0 16 37.87932544664698 40.0 36.0 41.0 33.0 41.0 17 37.85662145673817 40.0 36.0 41.0 33.0 41.0 18 37.61161547393798 39.0 36.0 41.0 33.0 41.0 19 37.333545531172454 38.0 35.0 41.0 33.0 41.0 20 37.03218687556365 38.0 35.0 41.0 33.0 41.0 21 36.9415253488002 38.0 35.0 41.0 32.0 41.0 22 36.85483074275138 38.0 35.0 40.0 32.0 41.0 23 36.77484512504937 38.0 35.0 40.0 32.0 41.0 24 36.66116838487972 38.0 35.0 40.0 32.0 41.0 25 36.59143074393026 38.0 35.0 40.0 32.0 41.0 26 36.31166557620555 37.0 35.0 40.0 31.0 41.0 27 36.24630628400323 37.0 35.0 40.0 31.0 41.0 28 36.15205507712802 37.0 35.0 40.0 31.0 41.0 29 36.11012478411817 37.0 35.0 40.0 31.0 41.0 30 35.95223898192192 37.0 35.0 40.0 31.0 41.0 31 35.57065421772677 37.0 35.0 40.0 30.0 41.0 32 35.44346872734346 37.0 35.0 40.0 29.0 41.0 33 35.3323265724744 37.0 35.0 40.0 28.0 41.0 34 35.17582595061685 37.0 35.0 40.0 27.0 41.0 35 34.96673798871815 37.0 35.0 40.0 25.0 41.0 36 34.80086058012532 37.0 34.0 40.0 24.0 41.0 37 34.704289343542406 37.0 34.0 40.0 24.0 41.0 38 34.624566615385525 37.0 34.0 40.0 23.0 41.0 39 34.48416119962512 36.0 34.0 40.0 23.0 41.0 40 34.43765096992096 36.0 34.0 40.0 23.0 41.0 41 34.36032489846923 36.0 34.0 40.0 23.0 41.0 42 34.26995455429612 36.0 34.0 40.0 22.0 41.0 43 34.10563797869769 36.0 34.0 40.0 21.0 41.0 44 33.9020435830784 35.0 33.0 40.0 21.0 41.0 45 33.724103906208555 35.0 33.0 40.0 20.0 41.0 46 33.723888171738786 35.0 33.0 40.0 20.0 41.0 47 33.73405362710945 35.0 33.0 40.0 20.0 41.0 48 33.68569963395873 35.0 33.0 40.0 20.0 41.0 49 33.58744849781613 35.0 33.0 40.0 20.0 41.0 50 33.48673704561664 35.0 33.0 40.0 20.0 41.0 51 33.047881263520246 35.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 1.0 12 4.0 13 5.0 14 20.0 15 28.0 16 91.0 17 196.0 18 416.0 19 791.0 20 1386.0 21 2153.0 22 3372.0 23 5446.0 24 8770.0 25 13153.0 26 16661.0 27 18254.0 28 18639.0 29 18741.0 30 21291.0 31 25387.0 32 31418.0 33 41360.0 34 72259.0 35 103159.0 36 88435.0 37 78892.0 38 104187.0 39 173651.0 40 97.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.26018991706601 18.259741943850095 25.002210394157487 30.477857744926407 2 30.74864576517951 21.227328723924717 28.970427873365047 19.053597637530725 3 22.294565967003237 21.255975432205737 38.40651211590718 18.042946484883853 4 22.71106317011783 25.297990604351234 33.65693503798931 18.33401118754163 5 19.42800893588678 31.67913328971489 32.235798954336204 16.657058820062126 6 79.55874638232157 1.8678125349979073 17.1566668434982 1.416774239182331 7 76.05547794616069 7.064419727325777 15.425604027043436 1.4544982994700948 8 75.6726966219283 3.9236559329926384 18.091280437127548 2.312367007951525 9 36.38238050609184 28.39560750473024 24.391434280560908 10.830577708617001 10 27.618845525867506 24.613181022439925 36.87255751445598 10.895415937236596 11 26.41650899188343 21.715973192339657 36.742055843398 15.125461972378915 12 17.099491314624558 30.706559860420978 36.759031670527484 15.434917154426978 13 13.050638656551902 33.47314813177486 37.11410938798607 16.362103823687175 14 12.203969278468403 24.877838882896263 46.83972579323679 16.07846604539855 15 14.785473879035443 23.217980230234655 44.8715908354111 17.124955055318797 16 15.561410644079384 22.789930033656937 36.854402810442494 24.79425651182119 17 16.537167040960078 23.767454745863617 41.37657453743818 18.318803675738124 18 19.655767949874157 25.35610923473207 36.790389795641694 18.197733019752082 19 20.70414316280879 25.24116873854279 36.34571743499968 17.708970663648742 20 16.130218740605827 28.980212551502184 38.00581186303808 16.88375684485391 21 17.939794757534496 24.393202595886898 36.283001184771265 21.384001461807337 22 14.774274548637514 27.237950404649492 37.00353073626756 20.984244310445437 23 13.157444902241636 24.771739963336927 45.146387037069786 16.924428097351655 24 14.110095312196073 26.14348110555074 41.83845850058649 17.907965081666696 25 13.960731610994207 30.156495906350024 36.722250711746916 19.160521770908858 26 13.44579818806623 30.638302888837803 37.08192604905307 18.8339728740429 27 13.673910865118803 28.170206244510855 41.526174014016846 16.629708876353497 28 12.548319216282646 25.088268406688947 40.64567086936276 21.717741507665647 29 14.139095683542289 29.139360930841185 38.719032377853615 18.0025110077629 30 19.777074381236996 28.076131869168243 34.99107000760376 17.155723741991004 31 18.947852381036586 27.279682646342827 36.30787548702351 17.46458948559707 32 17.671718154114576 28.746441265406446 34.75647350768922 18.825367072789753 33 15.348741254207116 28.87045911360247 34.95794356716356 20.822856065026848 34 14.619252238392482 27.662463970575235 36.78296287127254 20.935320919759747 35 20.155729636375426 28.452547258227085 33.69619163822627 17.69553146717123 36 16.272391292815335 30.250452394004235 34.70625335243114 18.770902960749293 37 15.984155894679139 30.841423375949734 34.27631695283903 18.8981037765321 38 16.77848313911337 30.50190683335986 33.416208378278014 19.303401649248762 39 18.716320961020436 27.201994659687717 33.44709495263862 20.63458942665323 40 14.462225837444667 26.968459148968776 35.09327863344592 23.47603638014064 41 15.990993380606296 28.295638744967672 32.63343412730691 23.07993374711912 42 16.36127860986838 26.419691959470214 34.61347574166092 22.60555368900049 43 16.64373751127301 28.483198057210895 34.52258433390509 20.35048009761101 44 14.763193105927982 33.64856501211296 31.676657648258505 19.91158423370055 45 17.812593941751693 30.83175658550099 32.353215091981866 19.002434380765447 46 16.216394640825683 29.857179065504297 32.3002835198906 21.62614277377942 47 15.658314323943578 29.12285665446529 35.4799502513955 19.738878770195633 48 17.427219088374503 26.626349077234117 34.96560626690952 20.98082556748186 49 17.499602129051652 29.333050402881177 32.724089759685945 20.443257708381225 50 16.254826027243848 29.027013963796687 32.88253081289456 21.83562919606491 51 15.579211685027675 26.87179124448138 35.070879972650054 22.478117097840887 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 685.0 1 4770.0 2 8855.0 3 33603.0 4 58351.0 5 33972.5 6 9594.0 7 9296.5 8 8999.0 9 10277.0 10 11555.0 11 12805.5 12 14056.0 13 13867.5 14 13679.0 15 12519.5 16 11360.0 17 10403.0 18 9446.0 19 8443.0 20 7440.0 21 7089.0 22 6738.0 23 6334.0 24 5930.0 25 6697.5 26 8749.0 27 10033.0 28 11159.0 29 12285.0 30 13782.0 31 15279.0 32 16321.5 33 17364.0 34 22544.0 35 27724.0 36 29408.5 37 31093.0 38 33229.5 39 35366.0 40 40669.0 41 45972.0 42 53948.0 43 61924.0 44 64091.5 45 66259.0 46 65126.0 47 63993.0 48 63370.0 49 62747.0 50 57773.5 51 52800.0 52 46653.0 53 40506.0 54 35145.0 55 29784.0 56 27750.5 57 25717.0 58 23242.5 59 20768.0 60 17621.5 61 14475.0 62 12512.5 63 10550.0 64 9191.0 65 7832.0 66 6461.0 67 5090.0 68 4290.5 69 3491.0 70 3612.5 71 3734.0 72 3679.0 73 3624.0 74 3050.5 75 2074.0 76 1671.0 77 1315.5 78 960.0 79 668.0 80 376.0 81 266.5 82 157.0 83 94.5 84 32.0 85 27.0 86 22.0 87 12.5 88 3.0 89 2.0 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 848265.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.38327893591581 #Duplication Level Percentage of deduplicated Percentage of total 1 78.66831091891497 25.475378559045748 2 9.405588856049718 6.091676149639985 3 3.472069794510741 3.3731101392182765 4 1.7526433776952968 2.270253575003698 5 1.0626480742700208 1.7206014499899929 6 0.7034359109168349 1.366773679005593 7 0.4997258391287894 1.1327932867994521 8 0.37557869644796016 0.9729975751569555 9 0.3075401960351638 0.8963243956991643 >10 2.710032760749512 20.569978095158863 >50 0.8200515722986113 18.59986235715668 >100 0.21744079131210828 10.001187891753805 >500 0.0037947782078901968 0.875695335954262 >1k 3.794778207890196E-4 0.24675782130173424 >5k 3.794778207890196E-4 0.6150512428362449 >10k+ 3.794778207890196E-4 5.7915584462795975 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 47129 5.55592886656882 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5005 0.5900278804383065 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2008 0.23671847830571816 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 997 0.11753402533406423 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 920 0.10845667332732105 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0828750449446812 0.0 2 0.0 0.0 0.0 0.28894272426659123 0.0 3 0.0 0.0 0.0 0.453513937271961 0.0 4 0.0 0.0 0.0 0.5701048610988312 0.0 5 0.0 0.0 0.0 1.2559754322057375 0.0 6 0.0 0.0 0.0 1.4245548266166823 0.0 7 0.0 0.0 0.0 1.9802773897308035 0.0 8 0.0 0.0 0.0 2.60060240608772 0.0 9 0.0 0.0 0.0 3.109759332284133 0.0 10 0.0 0.0 0.0 3.466133814315102 0.0 11 0.0 0.0 0.0 3.90573700435595 0.0 12 0.0 0.0 0.0 4.271070950705263 0.0 13 0.0 0.0 0.0 4.431633982305058 0.0 14 0.0 0.0 0.0 4.562725091805038 0.0 15 0.0 0.0 0.0 5.018714670533383 0.0 16 0.0 0.0 0.0 5.565241993952362 0.0 17 0.0 0.0 0.0 6.281291813289479 0.0 18 0.0 0.0 0.0 6.626938515676115 0.0 19 0.0 0.0 0.0 7.029053420805998 0.0 20 0.0 0.0 0.0 7.447790490000177 0.0 21 0.0 0.0 0.0 7.870182077534733 0.0 22 2.3577537679852405E-4 0.0 0.0 8.312496684408764 0.0 23 2.3577537679852405E-4 0.0 0.0 8.646236730267075 0.0 24 0.0012967645723918823 0.0 0.0 8.950033303271972 0.0 25 0.0012967645723918823 0.0 0.0 9.249585919494498 0.0 26 0.0012967645723918823 0.0 0.0 9.549610086470619 0.0 27 0.0012967645723918823 0.0 0.0 9.845390296664368 0.0 28 0.0012967645723918823 0.0 0.0 10.160268312378797 0.0 29 0.0012967645723918823 0.0 0.0 10.556370945400317 0.0 30 0.0012967645723918823 0.0 0.0 10.911566550547294 0.0 31 0.0027114168331830264 0.0 0.0 11.22526568937773 0.0 32 0.0027114168331830264 0.0 0.0 11.540851031222553 0.0 33 0.0027114168331830264 0.0 0.0 11.869286131102898 0.0 34 0.0027114168331830264 0.0 0.0 12.266213977943213 0.0 35 0.0027114168331830264 0.0 0.0 12.630015384343336 0.0 36 0.0027114168331830264 0.0 0.0 12.982853235722327 0.0 37 0.0027114168331830264 0.0 0.0 13.33073980418855 0.0 38 0.0027114168331830264 0.0 0.0 13.696663188979858 0.0 39 0.0027114168331830264 0.0 0.0 14.095713014211361 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTAC 20 7.032239E-4 45.000004 41 CGGTTGA 20 7.032239E-4 45.000004 25 GAATCGT 20 7.032239E-4 45.000004 20 CGATTCG 20 7.032239E-4 45.000004 9 CACTGCG 20 7.032239E-4 45.000004 15 TATTGCG 20 7.032239E-4 45.000004 1 TATTGCA 20 7.032239E-4 45.000004 33 AGCGGTA 20 7.032239E-4 45.000004 26 CCCGTAG 20 7.032239E-4 45.000004 23 ACCTAGT 20 7.032239E-4 45.000004 43 CGTAGTA 20 7.032239E-4 45.000004 28 AACGCCA 65 0.0 45.000004 14 ACGTGCC 20 7.032239E-4 45.000004 9 AGCGATC 20 7.032239E-4 45.000004 7 TCGAGCG 20 7.032239E-4 45.000004 1 CACGTTA 20 7.032239E-4 45.000004 40 CAATACG 20 7.032239E-4 45.000004 1 ATACCGG 20 7.032239E-4 45.000004 1 ACCCACG 20 7.032239E-4 45.000004 22 CGGACCC 20 7.032239E-4 45.000004 36 >>END_MODULE