##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043414_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1493742 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.511037381288066 31.0 31.0 33.0 30.0 34.0 2 30.523301212659213 31.0 31.0 34.0 26.0 34.0 3 31.474881873844346 31.0 31.0 34.0 28.0 34.0 4 35.0865551079102 37.0 35.0 37.0 32.0 37.0 5 35.40101235688626 37.0 35.0 37.0 33.0 37.0 6 35.8461615191914 37.0 35.0 37.0 35.0 37.0 7 33.742534520686974 37.0 35.0 37.0 32.0 37.0 8 34.76263839404663 37.0 35.0 37.0 31.0 37.0 9 36.76416543151361 39.0 37.0 39.0 32.0 39.0 10 36.58336446320717 39.0 35.0 39.0 32.0 39.0 11 36.507809916304154 39.0 35.0 39.0 32.0 39.0 12 36.5212044650281 39.0 35.0 39.0 32.0 39.0 13 36.58441953161925 39.0 35.0 39.0 32.0 39.0 14 37.917874706609304 40.0 36.0 41.0 33.0 41.0 15 38.02731864003288 40.0 36.0 41.0 33.0 41.0 16 37.988174664701134 40.0 36.0 41.0 33.0 41.0 17 37.93427646809155 40.0 36.0 41.0 33.0 41.0 18 37.68763481243749 39.0 36.0 41.0 33.0 41.0 19 37.45800211817034 39.0 36.0 41.0 33.0 41.0 20 37.17484277740065 39.0 35.0 41.0 33.0 41.0 21 37.07419018813155 38.0 35.0 41.0 32.0 41.0 22 36.97474128731736 38.0 35.0 41.0 32.0 41.0 23 36.901385245912614 38.0 35.0 40.0 32.0 41.0 24 36.75300420018986 38.0 35.0 40.0 32.0 41.0 25 36.67237916588005 38.0 35.0 40.0 32.0 41.0 26 36.39356127095576 38.0 35.0 40.0 31.0 41.0 27 36.2951681080133 38.0 35.0 40.0 31.0 41.0 28 36.213104404910624 38.0 35.0 40.0 31.0 41.0 29 36.14886238721279 38.0 35.0 40.0 31.0 41.0 30 35.976219454229714 38.0 35.0 40.0 30.0 41.0 31 35.557405495728176 38.0 35.0 40.0 29.0 41.0 32 35.38178480621151 38.0 35.0 40.0 27.0 41.0 33 35.200272871754294 38.0 35.0 40.0 25.0 41.0 34 34.96960787070324 38.0 34.0 40.0 24.0 41.0 35 34.744438463938216 38.0 34.0 40.0 22.0 41.0 36 34.58193315847047 38.0 34.0 40.0 21.0 41.0 37 34.471446876368205 38.0 34.0 40.0 21.0 41.0 38 34.35143619179215 38.0 34.0 40.0 20.0 41.0 39 34.22396973506804 38.0 34.0 40.0 20.0 41.0 40 34.15272717778572 37.0 34.0 40.0 19.0 41.0 41 34.07043117218368 37.0 33.0 40.0 18.0 41.0 42 33.98898738871907 37.0 33.0 40.0 18.0 41.0 43 33.84270242116778 37.0 33.0 40.0 18.0 41.0 44 33.65872285843204 37.0 33.0 40.0 18.0 41.0 45 33.47828272887821 37.0 33.0 40.0 17.0 41.0 46 33.49254021109402 36.0 33.0 40.0 18.0 41.0 47 33.470606704504526 36.0 33.0 40.0 18.0 41.0 48 33.399601135939136 36.0 33.0 40.0 17.0 41.0 49 33.31734195061798 36.0 33.0 40.0 16.0 41.0 50 33.204705364112414 36.0 33.0 40.0 15.0 41.0 51 32.76618318290575 35.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 7.0 13 14.0 14 32.0 15 52.0 16 170.0 17 380.0 18 792.0 19 1632.0 20 2730.0 21 4418.0 22 6883.0 23 11192.0 24 17730.0 25 26731.0 26 34334.0 27 37094.0 28 36608.0 29 36481.0 30 38661.0 31 44881.0 32 54523.0 33 70172.0 34 111641.0 35 144411.0 36 141151.0 37 145309.0 38 201864.0 39 323737.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.262031863601614 18.110825028686346 25.704305027240316 29.922838080471724 2 30.901119470430636 20.738052488314583 28.813811220411555 19.547016820843226 3 21.484566946634693 22.55469820089413 36.890306358126104 19.070428494345073 4 22.650564823108677 24.843513806266408 33.552916099299615 18.953005271325303 5 20.666085575688438 31.51735708040612 31.53248686854892 16.284070475356522 6 80.26058047507534 1.878436838490181 16.645377849722376 1.2156048367120962 7 76.53329691472824 7.076523255019944 15.197068837858211 1.1931109923935994 8 75.98500945946489 4.193026640477405 17.719860591721996 2.10210330833571 9 37.81556654361998 30.787579113394415 22.615485137326257 8.781369205659344 10 24.358557234114055 23.570871007175267 40.85190079679088 11.218670961919797 11 23.875274311092546 21.077937153805678 40.515162591665764 14.531625943436016 12 19.73747809193288 25.689443022958447 39.237900520973504 15.33517836413517 13 15.567614755426304 28.973678185389446 39.17637717892381 16.282329880260445 14 15.49156413892091 25.013020990237937 43.775899720299755 15.71951515054139 15 17.906171212967166 24.39725200201909 42.28441056085991 15.412166224153836 16 18.94242780881839 23.276777381903972 37.742059873793465 20.03873493548417 17 18.887599063292054 23.563172221173403 40.80570808077968 16.743520634754862 18 20.080375325859485 25.43417805752265 38.689412227814444 15.79603438880342 19 21.03395365464719 25.190561690037505 37.63715554627238 16.138329109042925 20 19.00843653053874 26.765599414088914 38.62300183030269 15.602962225069659 21 18.435981581826045 24.06854731272201 38.264840916302816 19.23063018914913 22 15.997809528017557 25.957963289510506 39.21433554121126 18.829891641260673 23 16.007181963150263 24.34048182350098 43.33646640450627 16.31586980884249 24 16.753428637609442 25.848774420214465 40.999918325922415 16.397878616253678 25 17.15791615955098 28.484303179531672 37.56980790524736 16.78797275566999 26 16.582448642402774 27.91633361048963 38.29021343712636 17.21100430998124 27 15.890829875574228 26.979090097218933 40.5705938508792 16.55948617632764 28 15.72982482918737 25.182059552452834 40.36814925201273 18.719966366347066 29 16.789713350766064 27.50495065412903 39.093899749755984 16.61143624534893 30 19.45483222671653 26.865482794217478 37.16197308504414 16.517711894021858 31 19.56007128406378 27.222639518738845 36.79892511558221 16.418364081615163 32 19.214964833284462 27.826960746902746 35.881497608020666 17.07657681179213 33 17.239322453275065 27.29132607906854 36.697368086322804 18.77198338133359 34 17.92605416464155 27.571628835501716 36.48468075477559 18.017636245081146 35 20.068927565804536 27.090822913193847 35.338766667871695 17.501482853129925 36 18.225771250992473 29.165946997540402 35.32859088115619 17.279690870310937 37 18.57563086530338 28.960155100412255 34.5893065870813 17.874907447203064 38 18.557622400655536 29.814184778897562 33.989872414379455 17.638320406067447 39 20.09229170767107 28.02632583136847 33.786021950243075 18.095360510717377 40 17.506905476313847 28.814882355855293 34.07087703231214 19.607335135518717 41 18.328399415695614 28.541140304015016 33.37303229071687 19.757427989572495 42 18.13418917055288 27.423209630578775 34.172300169641076 20.27030102922727 43 18.08967010367252 28.688622265424684 34.384853609257824 18.83685402164497 44 17.033195826320743 31.594880508146655 33.07458717770539 18.297336487827216 45 19.0298592394135 29.022347902114287 33.6500546948536 18.297738163618618 46 18.140749875145776 28.642764279239653 33.47773578034226 19.738750065272317 47 17.99909221271143 27.88165560049861 35.05451409948974 19.064738087300217 48 18.735698668176965 27.004596509972938 34.845374904099906 19.414329917750187 49 18.433035959355763 28.587868587748083 33.92306034107631 19.056035111819845 50 17.716446347495083 27.952082755924383 34.283229634033184 20.048241262547347 51 17.925116921128282 26.80790926411656 34.84805274270925 20.418921072045908 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 532.0 1 6440.5 2 12349.0 3 46333.0 4 80317.0 5 50198.5 6 20080.0 7 19456.0 8 18832.0 9 20392.5 10 21953.0 11 22835.0 12 23717.0 13 23037.5 14 22358.0 15 21114.5 16 19871.0 17 18201.5 18 16532.0 19 15515.5 20 14499.0 21 14151.0 22 13803.0 23 14189.0 24 14575.0 25 15386.0 26 18391.0 27 20585.0 28 22682.5 29 24780.0 30 28679.5 31 32579.0 32 34962.0 33 37345.0 34 43606.5 35 49868.0 36 53179.5 37 56491.0 38 62657.0 39 68823.0 40 75328.0 41 81833.0 42 89435.0 43 97037.0 44 100229.5 45 103422.0 46 106090.0 47 108758.0 48 109757.5 49 110757.0 50 102850.5 51 94944.0 52 86224.5 53 77505.0 54 69424.5 55 61344.0 56 55759.5 57 50175.0 58 43964.0 59 37753.0 60 32362.0 61 26971.0 62 22629.5 63 18288.0 64 15210.0 65 12132.0 66 9936.0 67 7740.0 68 6474.5 69 5209.0 70 4584.0 71 3959.0 72 3920.0 73 3881.0 74 3266.5 75 2134.5 76 1617.0 77 1258.5 78 900.0 79 702.0 80 504.0 81 325.0 82 146.0 83 108.5 84 71.0 85 55.0 86 39.0 87 21.5 88 4.0 89 5.0 90 6.0 91 4.0 92 2.0 93 2.5 94 3.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1493742.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.614207170287536 #Duplication Level Percentage of deduplicated Percentage of total 1 78.3006042488898 25.53712128531988 2 9.34480378132651 6.095467329797382 3 3.366995758432656 3.2943569162100608 4 1.6556669931021137 2.1599306527215743 5 1.0727572908256402 1.749356426321191 6 0.7501617117166492 1.4679557686286586 7 0.5297260184041579 1.2093615875407326 8 0.4035321278812713 1.0528704334869396 9 0.3255959526967585 0.9557148469553298 >10 3.2866417921575346 24.680827378498783 >50 0.7757405939933747 17.527693834889654 >100 0.1832464651073311 8.657116713388024 >500 0.0032337610472951473 0.7513437216890549 >1k 8.623362792787059E-4 0.4134991977590615 >5k 2.1558406981967646E-4 0.4355768627983993 >10k+ 2.1558406981967646E-4 4.01180704399533 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 57058 3.819802884299966 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6195 0.41473025462228413 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2409 0.1612728302477938 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06547315399848166 0.0 2 0.0 0.0 0.0 0.21201787189487878 0.0 3 0.0 0.0 0.0 0.3407549630391326 0.0 4 0.0 0.0 0.0 0.4271152581905041 0.0 5 0.0 0.0 0.0 0.8903813376071638 0.0 6 0.0 0.0 0.0 1.0203234561256227 0.0 7 0.0 0.0 0.0 1.426016005441368 0.0 8 0.0 0.0 0.0 1.8930980048763442 0.0 9 0.0 0.0 0.0 2.28031346778761 0.0 10 0.0 0.0 0.0 2.5400638128940605 0.0 11 0.0 0.0 0.0 2.852768416500306 0.0 12 0.0 0.0 0.0 3.1223598184960992 0.0 13 0.0 0.0 0.0 3.244469259082224 0.0 14 0.0 0.0 0.0 3.3430806658713488 0.0 15 0.0 0.0 0.0 3.6679024891848795 0.0 16 0.0 0.0 0.0 4.074197552187727 0.0 17 0.0 0.0 0.0 4.562434476636527 0.0 18 0.0 0.0 0.0 4.850235181175866 0.0 19 0.0 0.0 0.0 5.158052729320056 0.0 20 0.0 0.0 0.0 5.517351724728902 0.0 21 0.0 0.0 0.0 5.882876694904475 0.0 22 0.0 0.0 0.0 6.2701591037809745 0.0 23 6.694596523362133E-5 0.0 0.0 6.591499736902357 0.0 24 4.01675791401728E-4 0.0 0.0 6.866045140325438 0.0 25 4.01675791401728E-4 0.0 0.0 7.147887653958984 0.0 26 4.01675791401728E-4 0.0 0.0 7.438232305177199 0.0 27 4.01675791401728E-4 0.0 0.0 7.728242226569247 0.0 28 4.01675791401728E-4 0.0 0.0 8.053331833743712 0.0 29 4.01675791401728E-4 0.0 0.0 8.414505316179099 0.0 30 4.01675791401728E-4 0.0 0.0 8.762289605567762 0.0 31 4.01675791401728E-4 0.0 0.0 9.087513104672695 0.0 32 4.01675791401728E-4 0.0 0.0 9.425657175067716 0.0 33 4.01675791401728E-4 0.0 0.0 9.779667439223106 0.0 34 4.01675791401728E-4 0.0 0.0 10.156573223488394 0.0 35 4.01675791401728E-4 0.0 0.0 10.518215327680416 0.0 36 4.01675791401728E-4 0.0 0.0 10.888091785596174 0.0 37 4.01675791401728E-4 0.0 0.0 11.25903937895567 0.0 38 4.01675791401728E-4 0.0 0.0 11.644715084666561 0.0 39 4.01675791401728E-4 0.0 0.0 12.06339515123763 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTTA 20 7.033966E-4 45.0 30 GTCGAAC 25 3.8913695E-5 45.0 33 ACGTTAC 20 7.033966E-4 45.0 34 ATCGTAG 20 7.033966E-4 45.0 10 ATATCCG 20 7.033966E-4 45.0 9 TCGGACC 40 6.8175723E-9 45.0 12 CGTAGCG 35 1.2122473E-7 45.0 27 AGCGCGT 35 1.2122473E-7 45.0 44 TCGTCGA 20 7.033966E-4 45.0 32 CGTCGAC 20 7.033966E-4 45.0 33 CGCCGCA 20 7.033966E-4 45.0 17 CCAGTCG 20 7.033966E-4 45.0 27 CGTCCAG 20 7.033966E-4 45.0 15 TACGTCG 20 7.033966E-4 45.0 1 CGTTTTT 17345 0.0 44.066013 1 CCAGCGG 150 0.0 43.5 1 TTACCGG 120 0.0 43.125004 1 TATCCGG 70 0.0 41.785713 1 GAACGCA 200 0.0 41.625 8 ACGTAGG 120 0.0 41.250004 1 >>END_MODULE