##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043411_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 802702 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.531306761413326 31.0 31.0 33.0 30.0 34.0 2 30.567970429873103 31.0 31.0 34.0 26.0 34.0 3 31.49192103669855 31.0 31.0 34.0 28.0 34.0 4 35.094979207725906 37.0 35.0 37.0 32.0 37.0 5 35.413130900383955 37.0 35.0 37.0 33.0 37.0 6 35.80289073653734 37.0 35.0 37.0 35.0 37.0 7 33.70568280632165 37.0 35.0 37.0 32.0 37.0 8 34.75143079249834 37.0 35.0 37.0 31.0 37.0 9 36.72925693470304 39.0 37.0 39.0 32.0 39.0 10 36.68870514836141 39.0 35.0 39.0 32.0 39.0 11 36.348116735725085 38.0 35.0 39.0 32.0 39.0 12 36.17439348600103 39.0 35.0 39.0 32.0 39.0 13 36.26594551900955 39.0 35.0 39.0 32.0 39.0 14 37.64055029139083 40.0 35.0 41.0 33.0 41.0 15 37.808851852866944 40.0 35.0 41.0 33.0 41.0 16 37.778014755164435 40.0 35.0 41.0 33.0 41.0 17 37.75685746391562 40.0 36.0 41.0 33.0 41.0 18 37.487368911501406 39.0 36.0 41.0 33.0 41.0 19 37.20993469556573 38.0 35.0 41.0 33.0 41.0 20 36.91654312559331 38.0 35.0 41.0 33.0 41.0 21 36.819299067399854 38.0 35.0 41.0 32.0 41.0 22 36.725986729820036 38.0 35.0 40.0 32.0 41.0 23 36.6239463711315 37.0 35.0 40.0 32.0 41.0 24 36.45448871436722 37.0 35.0 40.0 32.0 41.0 25 36.358945162712935 37.0 35.0 40.0 32.0 41.0 26 36.093886647846894 36.0 35.0 40.0 31.0 41.0 27 36.03194211550488 36.0 35.0 40.0 31.0 41.0 28 35.924987106049315 36.0 35.0 40.0 31.0 41.0 29 35.86502338352216 36.0 35.0 40.0 31.0 41.0 30 35.70810338083124 36.0 35.0 40.0 31.0 41.0 31 35.288358568933425 36.0 35.0 40.0 29.0 41.0 32 35.13815961589731 36.0 34.0 40.0 27.0 41.0 33 35.040843301748346 36.0 34.0 40.0 27.0 41.0 34 34.880260669588466 36.0 34.0 40.0 26.0 41.0 35 34.66240896372502 36.0 34.0 40.0 24.0 41.0 36 34.48254022040558 35.0 34.0 40.0 23.0 41.0 37 34.42322555568567 35.0 34.0 40.0 23.0 41.0 38 34.34497360166039 35.0 34.0 40.0 23.0 41.0 39 34.180411908778105 35.0 34.0 40.0 23.0 41.0 40 34.123708424795254 35.0 34.0 40.0 22.0 41.0 41 34.05043714853084 35.0 34.0 40.0 22.0 41.0 42 33.96692421346901 35.0 33.0 40.0 22.0 41.0 43 33.79506965224953 35.0 33.0 40.0 21.0 41.0 44 33.61618010170648 35.0 33.0 40.0 20.0 41.0 45 33.43526863020149 35.0 33.0 40.0 20.0 41.0 46 33.442130454390295 35.0 33.0 40.0 20.0 41.0 47 33.45175046281185 35.0 33.0 40.0 20.0 41.0 48 33.38858131660317 35.0 33.0 40.0 20.0 41.0 49 33.29725477200754 35.0 33.0 40.0 20.0 41.0 50 33.17508116337071 35.0 33.0 39.0 20.0 41.0 51 32.76559918874003 35.0 33.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 6.0 13 11.0 14 18.0 15 47.0 16 105.0 17 229.0 18 458.0 19 826.0 20 1486.0 21 2233.0 22 3664.0 23 5589.0 24 8703.0 25 12902.0 26 16153.0 27 17536.0 28 17836.0 29 18432.0 30 21092.0 31 24824.0 32 30606.0 33 40929.0 34 72461.0 35 106789.0 36 89608.0 37 72015.0 38 92268.0 39 145792.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.66282381257303 18.59967958221108 25.257816724014642 30.479679881201243 2 30.282844692052592 21.229048887382866 29.326823653111617 19.161282767452928 3 22.225059860321764 21.661463407341703 37.74377041542191 18.369706316914623 4 22.297564974299306 25.456769760135145 34.473440953180635 17.77222431238492 5 18.783309372594065 32.13645910935814 32.21992719589586 16.860304322151933 6 79.20760132651968 2.229968282127116 17.14372207867926 1.4187083126739437 7 75.67901911294602 7.398511527316488 15.418798009722162 1.5036713500153234 8 75.44742631761227 3.8741650076865386 18.140978843954546 2.537429830746653 9 40.30262787435437 24.37554659138759 24.897658159566067 10.424167374691978 10 30.83049500312694 23.245862100754703 34.45674733587309 11.466895560245272 11 29.821403210656012 21.506362261461913 35.39981213451567 13.272422393366403 12 17.908389414751678 34.2415989993796 33.38237602497565 14.467635560893083 13 12.677805711210388 36.79659450206926 33.793736654449596 16.731863132270757 14 11.729259426287713 25.73258818341053 46.072390501082594 16.465761889219163 15 13.033105685547064 22.08254121703945 45.715097259007706 19.169255838405785 16 14.211625235766201 23.821667318631324 35.562388034413765 26.40431941118871 17 16.766122421521313 24.248724931543713 40.41225759995615 18.57289504697883 18 20.796758946657665 26.621959332354972 34.01150115484949 18.56978056613787 19 22.495147638849787 26.5948010594218 34.50757566319755 16.402475638530863 20 16.26057989141674 30.887552292133318 34.32706035365553 18.524807462794413 21 17.94065543626402 26.918333329180694 32.788382238987815 22.35262899556747 22 13.111839761206525 31.026956454574673 33.816036337270866 22.045167446947932 23 13.115078821281124 26.331191401042975 45.80840710500285 14.745322672673048 24 14.244389574213095 27.95196723067838 41.186268378551446 16.617374816557078 25 13.966951620900408 33.00228478314493 34.3707876646626 18.65997593129206 26 12.628846072390502 34.17569658478489 35.283704288764696 17.91175305405991 27 13.148964372830765 31.004158454818846 39.68309534547067 16.163781826879713 28 12.393640479281228 27.028835109417944 39.23946869448438 21.338055716816452 29 13.990995412992618 32.54856721423393 36.56923740067921 16.89119997209425 30 20.00717576385757 32.24845584039905 32.31734815660108 15.427020239142298 31 19.905643688442286 29.653470403711463 33.1050626508966 17.335823256949652 32 18.341302251645068 31.95270473974152 32.328684866862176 17.377308141751236 33 14.536527877095113 30.95470049906441 33.4783020348772 21.03046958896328 34 14.71492533966528 30.679504971957215 34.910215746316815 19.695353942060688 35 22.236521149816497 29.942120488051604 31.025087766070097 16.796270596061802 36 15.366973048528596 33.75287466581621 34.207339710129034 16.672812575526162 37 15.925461752929483 33.2572984744027 32.967651756193455 17.849588016474357 38 15.795899349945557 34.90772416164405 32.43333142311842 16.863045065291978 39 19.392377245852135 29.752386315220342 31.704044589399306 19.151191849528217 40 14.279271759631843 28.55667483075911 34.64374076556431 22.520312644044736 41 15.92633380756495 30.42299632989578 30.642629518800252 23.008040343739022 42 16.029485413017532 29.876467231924174 32.785890654315054 21.30815670074324 43 15.40285186781645 30.736437681729956 33.90909702479874 19.951613425654852 44 13.070977772573134 38.30001669361731 29.528268273904885 19.100737259904673 45 16.695485996048344 34.241474420145956 31.288822003682565 17.774217580123132 46 15.306053803279424 33.579709531058846 31.044522126517688 20.06971453914404 47 14.786682978240991 31.176576114174377 34.69992599993522 19.336814907649412 48 16.104232953200565 29.220931304518988 35.467084920680406 19.207750821600044 49 16.894065294467936 32.74104213020523 31.915704707350923 18.449187867975912 50 14.53578040169328 32.521035203599844 31.422993838311104 21.520190556395775 51 14.459662489940229 29.41203584892027 35.22166383041278 20.90663783072672 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 766.0 1 4863.0 2 8960.0 3 33008.5 4 57057.0 5 33266.5 6 9476.0 7 9482.5 8 9489.0 9 11555.0 10 13621.0 11 15115.0 12 16609.0 13 16606.5 14 16604.0 15 15068.0 16 13532.0 17 11543.0 18 9554.0 19 8402.0 20 7250.0 21 6683.5 22 6117.0 23 5642.0 24 5167.0 25 5281.5 26 6535.5 27 7675.0 28 8272.5 29 8870.0 30 11018.0 31 13166.0 32 15272.5 33 17379.0 34 21310.0 35 25241.0 36 25733.0 37 26225.0 38 27847.0 39 29469.0 40 35974.0 41 42479.0 42 52901.5 43 63324.0 44 64993.5 45 66663.0 46 66035.5 47 65408.0 48 59669.5 49 53931.0 50 48077.0 51 42223.0 52 39536.5 53 36850.0 54 32704.5 55 28559.0 56 26768.5 57 24978.0 58 23209.5 59 21441.0 60 17924.5 61 14408.0 62 11942.5 63 9477.0 64 7906.5 65 6336.0 66 5506.5 67 4677.0 68 4027.0 69 3377.0 70 3147.5 71 2918.0 72 3174.5 73 3431.0 74 2897.5 75 1737.5 76 1111.0 77 856.0 78 601.0 79 463.5 80 326.0 81 205.5 82 85.0 83 69.0 84 53.0 85 33.0 86 13.0 87 15.5 88 18.0 89 14.5 90 11.0 91 8.5 92 6.0 93 5.5 94 5.0 95 5.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 802702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.99019285561232 #Duplication Level Percentage of deduplicated Percentage of total 1 78.54304584480836 25.12607184042619 2 9.119186709566069 5.834490830507106 3 3.392795781801373 3.2560857413860167 4 1.7586991049555623 2.2504449417008487 5 1.134320066723611 1.8143558847239678 6 0.7940790837727726 1.5241645819499356 7 0.5778567479241011 1.2940024166306265 8 0.4490631625870301 1.1492493740408227 9 0.3459227012472064 0.9959520533429248 >10 2.8744889600825876 20.233692257673248 >50 0.7717011394835513 17.587976342538642 >100 0.23279919543611644 10.892758509376664 >500 0.004430434515220209 0.9546190345036337 >1k 0.0012083003223327842 1.0537015068390765 >5k 0.0 0.0 >10k+ 4.027667741109281E-4 6.032434684360323 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 46819 5.832675139715611 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4970 0.6191587911827802 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1961 0.2442998771648756 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 1247 0.15535030434706776 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 989 0.12320886206836411 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 926 0.11536037034914576 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 816 0.10165665464892326 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 813 0.1012829169480081 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08159939803314306 0.0 2 0.0 0.0 0.0 0.2708352539298519 0.0 3 0.0 0.0 0.0 0.44487244332267767 0.0 4 0.0 0.0 0.0 0.5659634584191892 0.0 5 0.0 0.0 0.0 1.2188832219179722 0.0 6 0.0 0.0 0.0 1.420078684243966 0.0 7 0.0 0.0 0.0 1.9717155307947407 0.0 8 0.0 0.0 0.0 2.6055746715468504 0.0 9 0.0 0.0 0.0 3.0678882075789025 0.0 10 0.0 0.0 0.0 3.38382114408585 0.0 11 1.2457923363838635E-4 0.0 0.0 3.755316418795518 0.0 12 1.2457923363838635E-4 0.0 0.0 4.046707246275703 0.0 13 1.2457923363838635E-4 0.0 0.0 4.183246086343376 0.0 14 1.2457923363838635E-4 0.0 0.0 4.291505440375133 0.0 15 1.2457923363838635E-4 0.0 0.0 4.660384551178395 0.0 16 1.2457923363838635E-4 0.0 0.0 5.107623999940202 0.0 17 1.2457923363838635E-4 0.0 0.0 5.633846682828746 0.0 18 1.2457923363838635E-4 0.0 0.0 5.892348592628397 0.0 19 1.2457923363838635E-4 0.0 0.0 6.168291595137424 0.0 20 1.2457923363838635E-4 0.0 0.0 6.476002302224238 0.0 21 8.720546354687045E-4 0.0 0.0 6.81398576308518 0.0 22 8.720546354687045E-4 0.0 0.0 7.166171256580898 0.0 23 9.966338691070908E-4 0.0 0.0 7.460053668733852 0.0 24 0.003239060074598045 0.0 0.0 7.692643097936719 0.0 25 0.0033636393082364315 0.0 0.0 7.92797327027963 0.0 26 0.0033636393082364315 0.0 0.0 8.171774830509953 0.0 27 0.0033636393082364315 0.0 0.0 8.411839013731123 0.0 28 0.0033636393082364315 0.0 0.0 8.668845972727114 0.0 29 0.0033636393082364315 0.0 0.0 8.98577554310317 0.0 30 0.0033636393082364315 0.0 0.0 9.27367815204148 0.0 31 0.0033636393082364315 0.0 0.0 9.512371963692628 0.0 32 0.0033636393082364315 0.0 0.0 9.774112933566878 0.0 33 0.0033636393082364315 0.0 0.0 10.046193979833113 0.0 34 0.0033636393082364315 0.0 0.0 10.387042763067738 0.0 35 0.0033636393082364315 0.0 0.0 10.6556355907921 0.0 36 0.0033636393082364315 0.0 0.0 10.942167828160388 0.0 37 0.0033636393082364315 0.0 0.0 11.237046874182449 0.0 38 0.0033636393082364315 0.0 0.0 11.537531985718237 0.0 39 0.0033636393082364315 0.0 0.0 11.837269621852194 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGG 30 2.164681E-6 45.000004 1 CTATCGG 30 2.164681E-6 45.000004 1 CACATCG 30 2.164681E-6 45.000004 16 GAATACG 30 2.164681E-6 45.000004 38 TTATAGT 115 0.0 45.000004 36 CCGTATT 30 2.164681E-6 45.000004 17 GTTGTTA 30 2.164681E-6 45.000004 29 TTAACGT 30 2.164681E-6 45.000004 30 ACGTCTT 30 2.164681E-6 45.000004 33 ACATCGC 30 2.164681E-6 45.000004 17 CGCGTCA 30 2.164681E-6 45.000004 21 GTTATCG 30 2.164681E-6 45.000004 31 TCTGCGT 20 7.032014E-4 45.0 44 CTTGTAC 20 7.032014E-4 45.0 43 CAGCGTT 25 3.8897513E-5 45.0 13 AACGTAG 25 3.8897513E-5 45.0 32 GTCGATT 20 7.032014E-4 45.0 19 GCGGTCA 20 7.032014E-4 45.0 26 CGTTGCG 20 7.032014E-4 45.0 16 TAACGTA 25 3.8897513E-5 45.0 31 >>END_MODULE