##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043410_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 614093 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.52129074912106 31.0 31.0 33.0 30.0 34.0 2 30.565984305308806 31.0 31.0 34.0 26.0 34.0 3 31.451099426308392 31.0 31.0 34.0 28.0 34.0 4 35.06343176033597 37.0 35.0 37.0 32.0 37.0 5 35.375421963774215 37.0 35.0 37.0 33.0 37.0 6 35.7983188214163 37.0 35.0 37.0 35.0 37.0 7 33.777701423074355 37.0 35.0 37.0 32.0 37.0 8 34.79456206144672 37.0 35.0 37.0 31.0 37.0 9 36.78498696451515 39.0 37.0 39.0 32.0 39.0 10 36.714427619269394 39.0 35.0 39.0 32.0 39.0 11 36.3137993756646 38.0 35.0 39.0 32.0 39.0 12 36.11398762076754 38.0 35.0 39.0 32.0 39.0 13 36.21258017922367 39.0 35.0 39.0 32.0 39.0 14 37.5718563800597 40.0 35.0 41.0 33.0 41.0 15 37.74612477263216 40.0 35.0 41.0 33.0 41.0 16 37.7047515604314 40.0 35.0 41.0 33.0 41.0 17 37.687084855225514 40.0 36.0 41.0 33.0 41.0 18 37.40123238662548 39.0 36.0 41.0 33.0 41.0 19 37.120996331174595 38.0 35.0 41.0 33.0 41.0 20 36.781570543875276 38.0 35.0 40.0 32.0 41.0 21 36.698206949110315 38.0 35.0 40.0 32.0 41.0 22 36.61039125995574 37.0 35.0 40.0 32.0 41.0 23 36.514488847780385 37.0 35.0 40.0 32.0 41.0 24 36.34951546427007 37.0 35.0 40.0 32.0 41.0 25 36.23860718164838 36.0 35.0 40.0 32.0 41.0 26 35.959763423455406 36.0 35.0 40.0 31.0 41.0 27 35.89868635532403 36.0 35.0 40.0 31.0 41.0 28 35.787628258260554 36.0 35.0 40.0 31.0 41.0 29 35.75517063376394 36.0 35.0 40.0 31.0 41.0 30 35.56107462550461 35.0 35.0 40.0 31.0 41.0 31 35.12196198295698 35.0 34.0 40.0 29.0 41.0 32 34.981338331490505 35.0 34.0 40.0 27.0 41.0 33 34.88685589967643 35.0 34.0 40.0 27.0 41.0 34 34.739155144253395 35.0 34.0 40.0 26.0 41.0 35 34.516120522461584 35.0 34.0 40.0 24.0 41.0 36 34.347919614781475 35.0 34.0 40.0 23.0 41.0 37 34.29738003852837 35.0 34.0 40.0 23.0 41.0 38 34.19469526602648 35.0 34.0 40.0 23.0 41.0 39 34.01630209105136 35.0 33.0 40.0 23.0 41.0 40 33.95120934451297 35.0 33.0 40.0 22.0 41.0 41 33.87232552724099 35.0 33.0 40.0 22.0 41.0 42 33.75197567795106 35.0 33.0 40.0 22.0 41.0 43 33.57287739804883 35.0 33.0 40.0 21.0 41.0 44 33.34710866269441 35.0 33.0 40.0 20.0 41.0 45 33.18003299174555 35.0 33.0 39.0 20.0 41.0 46 33.18073646825481 35.0 33.0 39.0 20.0 41.0 47 33.15563440716634 35.0 33.0 39.0 20.0 41.0 48 33.0980942625954 35.0 33.0 39.0 20.0 41.0 49 32.96239494669374 35.0 33.0 39.0 20.0 41.0 50 32.816244445059624 35.0 33.0 39.0 20.0 41.0 51 32.38682740236414 35.0 32.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 0.0 11 1.0 12 3.0 13 9.0 14 16.0 15 24.0 16 85.0 17 157.0 18 336.0 19 620.0 20 1168.0 21 1753.0 22 2773.0 23 4112.0 24 6715.0 25 9844.0 26 12353.0 27 13566.0 28 13933.0 29 14745.0 30 16734.0 31 19870.0 32 24298.0 33 32363.0 34 58735.0 35 87246.0 36 72085.0 37 53508.0 38 66645.0 39 100336.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.0799260046931 18.713452196979937 24.292086052112627 30.914535746214334 2 32.041400895304136 21.1523336041935 29.145911124210826 17.66035437629154 3 22.62540038723776 21.189950056424678 38.25479202661486 17.9298575297227 4 21.437958094295166 25.25692362557463 35.30100489665246 18.004113383477748 5 18.30439363418896 32.45143650880241 33.47880532753182 15.765364529476805 6 77.75564938861052 2.3480156914343593 18.411217844854118 1.4851170751010025 7 74.80397920184728 7.099576122834815 16.48203122328377 1.6144134520341382 8 74.68152217986527 3.494421854670221 19.404389888827914 2.4196660766366005 9 40.744154387039096 24.08250867539607 24.95713190021707 10.216205037347763 10 31.426184633272157 22.423802257964184 34.69669903418537 11.45331407457828 11 29.771874944023136 21.42232528297831 35.37770337717577 13.428096395822783 12 16.351432112074228 35.47882812538166 34.1984031734607 13.971336589083414 13 12.190173149669512 37.46598642225201 35.4164597218988 14.927380706179683 14 10.522347592302793 26.298459679559937 48.36270727723651 14.81648545090076 15 11.88012239188527 23.129558552206262 47.72974126068853 17.26057779521994 16 13.417023154473345 23.964122698027822 35.75875315302405 26.860100994474777 17 15.987969248957407 24.873594064742637 41.335432906742135 17.80300377955782 18 19.736424287526482 27.069352687622235 34.96050272515727 18.23372029969402 19 21.440726404632525 26.57252240295851 34.76297564049745 17.22377555191152 20 14.946433194972098 31.32799103718818 36.283755066415026 17.441820701424703 21 17.616061410893792 26.963342685879827 33.28534928748577 22.135246615740613 22 12.639616475029026 31.106851893768532 34.88282719392665 21.370704437275787 23 12.240328419311082 25.756847904144813 46.68169153532119 15.32113214122291 24 12.751163097446153 27.081077296109875 42.56684248151338 17.600917124930586 25 12.773635263714128 33.251803879868355 35.61463817369682 18.359922682720693 26 11.924415357283017 35.438280521028574 35.087030791753044 17.55027332993537 27 12.634242696138859 30.870894147954786 40.69725595308854 15.797607202817815 28 11.389968620388117 27.100943993825037 39.99801333022848 21.51107405555836 29 14.37420716406147 32.64652096669397 36.60878726837792 16.370484600866643 30 20.891949590697177 30.985371922493826 33.07251507507821 15.050163411730797 31 19.983129591120562 29.73523554249926 33.98068370751661 16.300951158863562 32 19.42800194758774 31.76473270335275 32.11223707158362 16.69502827747589 33 15.754128446342818 30.510850962313523 33.1591469044591 20.57587368688456 34 16.021514656574816 29.39603610528047 35.04192361743254 19.540525620712174 35 22.68695458179787 29.47664278863299 31.354534248069914 16.48186838149922 36 15.773018093350682 34.03214171143459 33.799929326665506 16.394910868549225 37 17.021200371930636 33.3234542650706 32.329630853958605 17.32571450904016 38 16.42275681370737 34.266796722971925 31.85999514731482 17.450451316005882 39 19.91701582659304 29.419648164040304 31.086333828915162 19.577002180451494 40 14.393911019992087 28.525646766857786 34.615278141910096 22.465164071240025 41 16.979675716870247 30.07866886611637 30.605787722706495 22.335867694306888 42 16.575013882262134 29.80281488308774 32.73820089139593 20.883970343254198 43 16.41380051555709 31.21872419975476 33.56771694189643 18.799758342791726 44 14.19915224566963 38.10742021159662 29.178479481120938 18.514948061612817 45 18.227206628311997 33.758893196958766 30.96908774403877 17.044812430690463 46 16.992214534280638 32.51869016582179 30.599925418462675 19.889169881434896 47 16.390839823935462 31.525843805417097 34.242044771720245 17.841271598927197 48 17.819450799797426 28.9599458062541 34.31402084049159 18.90658255345689 49 17.641464729283676 32.71963692795717 31.75023978452775 17.888658558231405 50 15.519799118374578 31.956560325553298 31.76180155123084 20.76183900484129 51 15.480717090082447 28.804269060223774 35.04794876346091 20.667065086232867 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 832.0 1 4224.5 2 7617.0 3 28648.0 4 49679.0 5 28387.0 6 7095.0 7 7263.0 8 7431.0 9 9141.0 10 10851.0 11 12362.0 12 13873.0 13 13884.5 14 13896.0 15 12322.0 16 10748.0 17 9304.5 18 7861.0 19 6756.5 20 5652.0 21 5269.5 22 4887.0 23 4531.5 24 4176.0 25 4336.0 26 5195.0 27 5894.0 28 6037.0 29 6180.0 30 7323.5 31 8467.0 32 9606.5 33 10746.0 34 13036.5 35 15327.0 36 16990.5 37 18654.0 38 19255.0 39 19856.0 40 25216.0 41 30576.0 42 36416.5 43 42257.0 44 46133.0 45 50009.0 46 49543.0 47 49077.0 48 47273.0 49 45469.0 50 42197.0 51 38925.0 52 33660.5 53 28396.0 54 24899.5 55 21403.0 56 19875.5 57 18348.0 58 16752.0 59 15156.0 60 12478.0 61 9800.0 62 8710.5 63 7621.0 64 6732.0 65 5843.0 66 4826.5 67 3810.0 68 3607.0 69 3404.0 70 3159.5 71 2915.0 72 2763.5 73 2612.0 74 2278.0 75 1488.5 76 1033.0 77 805.5 78 578.0 79 490.5 80 403.0 81 288.5 82 174.0 83 129.0 84 84.0 85 51.0 86 18.0 87 12.0 88 6.0 89 6.5 90 7.0 91 5.0 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 614093.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.75437931222399 #Duplication Level Percentage of deduplicated Percentage of total 1 78.74078053631852 26.5784617356348 2 9.154009927510092 6.179758466420795 3 3.3981960170012373 3.4411199200544558 4 1.8435144536716352 2.4890674454719908 5 1.1879084517107075 2.0048556233619967 6 0.8135712349611463 1.6476955237435826 7 0.5968536789939116 1.4102497832259806 8 0.4260551828648376 1.1504982600286948 9 0.3513058395023578 1.0672299505045681 >10 2.6010291812372337 19.253029866883402 >50 0.6863466354491103 16.36109576142423 >100 0.1940737993399123 9.273317203676442 >500 0.004399657919544612 1.0057272968630742 >1k 0.0014665526398482038 1.1885568038235805 >5k 0.0 0.0 >10k+ 4.888508799494013E-4 6.949336358882423 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42115 6.858081756346351 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4391 0.7150382759614586 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1775 0.2890441675772236 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1037 0.16886693057891883 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 980 0.15958494885953756 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 815 0.13271605440869705 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 728 0.11854881915279933 No Hit CCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 683 0.11122093884802466 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10845262851066532 0.0 2 0.0 0.0 0.0 0.37258200305165506 0.0 3 0.0 0.0 0.0 0.5907899943493901 0.0 4 0.0 0.0 0.0 0.7419071704122991 0.0 5 0.0 0.0 0.0 1.63574572581026 0.0 6 0.0 0.0 0.0 1.8725176805467576 0.0 7 0.0 0.0 0.0 2.539354788281254 0.0 8 0.0 0.0 0.0 3.3691965223508493 0.0 9 0.0 0.0 0.0 3.9129252409651305 0.0 10 0.0 0.0 0.0 4.317587075573244 0.0 11 0.0 0.0 0.0 4.795853396798205 0.0 12 0.0 0.0 0.0 5.1894419900568804 0.0 13 0.0 0.0 0.0 5.351632407469227 0.0 14 0.0 0.0 0.0 5.478974682987756 0.0 15 0.0 0.0 0.0 5.92564969800991 0.0 16 0.0 0.0 0.0 6.470029783762394 0.0 17 0.0 0.0 0.0 7.158850532411215 0.0 18 0.0 0.0 0.0 7.481440107605851 0.0 19 0.0 0.0 0.0 7.840831926108912 0.0 20 0.0 0.0 0.0 8.22937242404652 0.0 21 0.0 0.0 0.0 8.588764242549582 0.0 22 1.6284178455054855E-4 0.0 0.0 8.976490531564437 0.0 23 3.256835691010971E-4 0.0 0.0 9.26537185735711 0.0 24 8.142089227527427E-4 0.0 0.0 9.51728809805681 0.0 25 8.142089227527427E-4 0.0 0.0 9.765784661280946 0.0 26 8.142089227527427E-4 0.0 0.0 10.036264865419406 0.0 27 8.142089227527427E-4 0.0 0.0 10.297137404269385 0.0 28 8.142089227527427E-4 0.0 0.0 10.568106133761498 0.0 29 8.142089227527427E-4 0.0 0.0 10.920170071959785 0.0 30 8.142089227527427E-4 0.0 0.0 11.231686405804984 0.0 31 8.142089227527427E-4 0.0 0.0 11.492396102870412 0.0 32 8.142089227527427E-4 0.0 0.0 11.753757167074042 0.0 33 8.142089227527427E-4 0.0 0.0 12.010884344879358 0.0 34 8.142089227527427E-4 0.0 0.0 12.371090372305172 0.0 35 8.142089227527427E-4 0.0 0.0 12.657203387760486 0.0 36 8.142089227527427E-4 0.0 0.0 12.935825681126474 0.0 37 8.142089227527427E-4 0.0 0.0 13.238711400390494 0.0 38 8.142089227527427E-4 0.0 0.0 13.538340283963503 0.0 39 8.142089227527427E-4 0.0 0.0 13.851485035654209 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 215 0.0 45.0 24 CAGGTTT 25 3.8886763E-5 45.0 45 CAGGTTC 25 3.8886763E-5 45.0 31 CAGGTAT 45 3.8380676E-10 45.0 40 TGTCACC 45 3.8380676E-10 45.0 30 CGGGTAC 50 2.1827873E-11 45.0 5 ATCTCGG 20 7.0307165E-4 45.0 1 ACCGGGT 40 6.8066583E-9 45.0 3 ACCGGCA 20 7.0307165E-4 45.0 3 AGTTTGG 80 0.0 45.0 1 TCCGCAA 55 1.8189894E-12 45.0 31 GGTAACC 20 7.0307165E-4 45.0 18 GCAACTA 20 7.0307165E-4 45.0 8 ACACCCG 35 1.210683E-7 45.0 28 TATGGGT 70 0.0 45.0 3 CACATCG 50 2.1827873E-11 45.0 16 ACCGACT 35 1.210683E-7 45.0 33 TCGGGCA 50 2.1827873E-11 45.0 4 CCTACGG 25 3.8886763E-5 45.0 1 CACGACC 20 7.0307165E-4 45.0 26 >>END_MODULE