##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043405_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2289789 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.495212440971635 31.0 31.0 33.0 30.0 34.0 2 30.51248128102633 31.0 31.0 34.0 26.0 34.0 3 31.50037099488206 31.0 31.0 34.0 28.0 34.0 4 35.11597007409853 37.0 35.0 37.0 32.0 37.0 5 35.429473632723365 37.0 35.0 37.0 33.0 37.0 6 35.74246229674437 37.0 35.0 37.0 35.0 37.0 7 33.65150675455249 37.0 35.0 37.0 31.0 37.0 8 34.67899968075661 37.0 35.0 37.0 31.0 37.0 9 36.68052165505206 39.0 37.0 39.0 32.0 39.0 10 36.676764977035 39.0 35.0 39.0 32.0 39.0 11 36.53954359986881 39.0 35.0 39.0 32.0 39.0 12 36.520251429280165 39.0 35.0 39.0 32.0 39.0 13 36.50046183294618 39.0 35.0 39.0 32.0 39.0 14 37.811707978333374 40.0 36.0 41.0 33.0 41.0 15 37.9153825963877 40.0 36.0 41.0 33.0 41.0 16 37.777024869977105 40.0 36.0 41.0 33.0 41.0 17 37.754786576405074 40.0 36.0 41.0 33.0 41.0 18 37.53664944673942 39.0 36.0 41.0 33.0 41.0 19 37.31750742098944 39.0 35.0 41.0 32.0 41.0 20 37.073201941314245 39.0 35.0 41.0 32.0 41.0 21 36.99333169999507 38.0 35.0 41.0 32.0 41.0 22 36.904107321678985 38.0 35.0 41.0 32.0 41.0 23 36.84170681228707 38.0 35.0 40.0 32.0 41.0 24 36.70308093889874 38.0 35.0 40.0 32.0 41.0 25 36.58881800899559 38.0 35.0 40.0 31.0 41.0 26 36.304924602223174 38.0 35.0 40.0 31.0 41.0 27 36.166210074378036 38.0 35.0 40.0 31.0 41.0 28 35.98439332183009 38.0 35.0 40.0 30.0 41.0 29 35.92808638699898 37.0 35.0 40.0 30.0 41.0 30 35.754034978768786 37.0 35.0 40.0 30.0 41.0 31 35.53541352500165 38.0 34.0 40.0 29.0 41.0 32 35.447091849947746 38.0 34.0 40.0 27.0 41.0 33 35.23394644659399 37.0 34.0 40.0 26.0 41.0 34 35.11029793574866 37.0 34.0 40.0 26.0 41.0 35 34.92830256412272 37.0 34.0 40.0 25.0 41.0 36 34.77525745821995 37.0 34.0 40.0 24.0 41.0 37 34.64612023203885 37.0 34.0 40.0 23.0 41.0 38 34.51687469893514 37.0 34.0 40.0 23.0 41.0 39 34.37532235502922 36.0 34.0 40.0 23.0 41.0 40 34.25436535855487 36.0 33.0 40.0 23.0 41.0 41 34.142720573817066 36.0 33.0 40.0 23.0 41.0 42 34.03337032364117 36.0 33.0 40.0 22.0 41.0 43 33.85332491334354 35.0 33.0 40.0 22.0 41.0 44 33.635322293888215 35.0 33.0 40.0 21.0 41.0 45 33.438202384586525 35.0 33.0 40.0 20.0 41.0 46 33.43980165858077 35.0 33.0 40.0 20.0 41.0 47 33.38849955170542 35.0 33.0 39.0 21.0 41.0 48 33.2746362219401 35.0 33.0 39.0 20.0 41.0 49 33.225205466529886 35.0 33.0 39.0 20.0 41.0 50 33.14229346022712 35.0 33.0 39.0 20.0 41.0 51 32.73254740939012 35.0 32.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 7.0 12 17.0 13 23.0 14 58.0 15 127.0 16 289.0 17 716.0 18 1407.0 19 2458.0 20 4185.0 21 6607.0 22 9920.0 23 14884.0 24 22360.0 25 32012.0 26 43232.0 27 51343.0 28 55238.0 29 58047.0 30 63774.0 31 73735.0 32 89227.0 33 117065.0 34 199686.0 35 228123.0 36 234965.0 37 258072.0 38 321708.0 39 400270.0 40 226.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.205621566004552 16.70970556675746 23.597676467132995 29.486996400104985 2 31.504518538607705 20.782395233796652 27.297449677677726 20.415636549917917 3 27.5223175585174 21.274449305154317 32.13999193812181 19.063241198206473 4 23.88237518828154 24.371590570135503 29.680551352111483 22.065482889471475 5 21.968312364152332 33.70533267475737 27.902876640598762 16.42347832049154 6 81.75085127931001 2.393364628793308 14.375953417541965 1.4798306743547114 7 76.76362319846938 7.8198034840764805 13.705236596035705 1.7113367214184363 8 76.0594098408194 4.135970606898715 16.56253043402689 3.242089118255001 9 43.55370735032791 17.884136922659685 23.20750951288525 15.354646214127154 10 28.08437808025106 18.675825589170007 30.887300096209735 22.352496234369195 11 24.35822689339498 15.95802058617628 39.7960248739076 19.887727646521142 12 20.650898401555775 18.71495583217493 40.36144815089949 20.2726976153698 13 17.562840942986448 22.338346458996877 41.983824710486424 18.114987887530248 14 17.02549885600813 18.345445803084914 42.65899609090619 21.970059250000766 15 21.495823414297124 15.459415692886985 41.253495409402355 21.79126548341354 16 22.007224246426198 16.532352980995192 36.2440818782866 25.216340894292006 17 22.092734308707048 19.214128463364965 36.454931000192595 22.238206227735393 18 24.825693546435936 20.9781774652599 33.260357177014996 20.93577181128916 19 24.420940095353764 20.571327751159604 32.23205282233428 22.775679331152347 20 23.95198858934164 21.860267474426685 36.12738990361121 18.060354032620474 21 22.748253223331933 17.828367591948428 35.08410600278017 24.339273181939472 22 22.10125037721816 20.680027723078414 34.36395231176322 22.8547695879402 23 23.110513676150944 20.505775859697117 36.05061427057253 20.333096193579408 24 26.13480980125243 18.24006491427813 33.84652472345705 21.77860056101239 25 21.08076333670919 20.947126569303983 32.97260140563169 24.999508688355128 26 20.443018985592122 20.761345259323022 35.20927037382047 23.586365381264386 27 21.447522020587922 20.770298049296247 35.82945852216077 21.952721407955057 28 21.426078996798395 22.598807138998396 34.01256622335071 21.9625476408525 29 21.822316379369454 21.005952950250002 36.151802633343074 21.019928037037474 30 25.854652983309816 21.163696742363598 32.55723562302029 20.4244146513063 31 26.317097339536527 21.608977945129443 31.387346170323994 20.686578545010043 32 26.362647388034443 19.643775037787325 30.834806176464298 23.158771397713938 33 22.434468852806962 22.369047977783104 33.041123003036525 22.15536016637341 34 23.239608540350222 22.29528572283298 32.28459041422594 22.180515322590857 35 27.162546418032402 24.24533439543993 28.9743290757358 19.61779011079187 36 23.167200121932634 24.255073284044947 30.19780425183281 22.379922342189605 37 24.672622673966902 27.0248918131758 27.584637711160287 20.717847801697012 38 23.29275754228883 23.42538985033119 27.943841113744543 25.338011493635438 39 23.647855763129265 21.964425543139566 32.60256731078715 21.78515138294402 40 21.56941098066241 21.57290475235928 32.49238248589717 24.36530178108114 41 21.797204895298215 25.62511218282558 29.010445940652176 23.567236981224035 42 21.794278861502086 21.619895981682156 30.812577054042972 25.77324810277279 43 22.43128078613357 21.293708721633305 33.12833627901959 23.14667421321353 44 22.97635284299121 23.580032920063815 31.78074486339134 21.662869373553633 45 24.883340779434263 22.374157618889775 31.074085865553553 21.668415736122412 46 22.548977220171814 24.39770651356959 30.332882200062976 22.72043406619562 47 21.939226714775902 26.97370805781668 30.131684622469578 20.955380604937833 48 23.399099218312255 24.76328604950063 30.871534451427618 20.966080280759495 49 21.762441866914376 23.10453059212006 32.30874111108054 22.824286429885024 50 21.35415097198912 24.867837167529412 32.65624037848029 21.12177148200118 51 20.745579614540905 22.20623821670905 33.152312287289355 23.895869881460694 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 873.0 1 10185.0 2 19497.0 3 67114.0 4 114731.0 5 69826.0 6 24921.0 7 22943.5 8 20966.0 9 21110.0 10 21254.0 11 21358.5 12 21463.0 13 20266.0 14 19069.0 15 17892.0 16 16715.0 17 15379.5 18 14044.0 19 13358.5 20 12673.0 21 12574.0 22 12475.0 23 12218.5 24 11962.0 25 12098.5 26 13349.5 27 14464.0 28 16813.0 29 19162.0 30 21250.5 31 23339.0 32 25368.5 33 27398.0 34 31185.0 35 34972.0 36 38995.0 37 43018.0 38 47858.0 39 52698.0 40 56782.0 41 60866.0 42 71192.0 43 81518.0 44 88911.5 45 96305.0 46 106991.0 47 117677.0 48 133191.0 49 148705.0 50 145036.0 51 141367.0 52 126859.5 53 112352.0 54 115017.0 55 117682.0 56 124255.0 57 130828.0 58 133103.5 59 135379.0 60 133434.0 61 131489.0 62 124052.0 63 116615.0 64 108686.0 65 100757.0 66 86725.0 67 72693.0 68 62386.5 69 52080.0 70 45990.5 71 39901.0 72 39093.5 73 38286.0 74 32254.0 75 20236.0 76 14250.0 77 11150.5 78 8051.0 79 6156.0 80 4261.0 81 3416.0 82 2571.0 83 1877.5 84 1184.0 85 841.0 86 498.0 87 344.0 88 190.0 89 148.0 90 106.0 91 60.5 92 15.0 93 11.5 94 8.0 95 6.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2289789.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.384146365578975 #Duplication Level Percentage of deduplicated Percentage of total 1 78.04325616003796 20.591046933728144 2 9.122346935358966 4.813706734802036 3 3.0872163888567115 2.4436070719742897 4 1.527806465123426 1.6123947757637722 5 0.9540606355356741 1.2586037724805261 6 0.6650303648816389 1.0527755090754933 7 0.465865836072512 0.8604030683961985 8 0.3533113320459083 0.7457454317853535 9 0.2969399689756907 0.7051056842920594 >10 4.006652534717743 26.44132156783547 >50 1.2200629099460876 21.93817342993745 >100 0.2492636490334516 9.630698647128547 >500 0.004528878824912869 0.845304091805913 >1k 0.002612814706680501 1.2392554143177537 >5k 6.967505884481337E-4 1.3482676094878525 >10k+ 3.483752942240669E-4 4.473590257189115 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 79861 3.4877012685448308 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 17480 0.7633891157656885 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9013 0.3936170537984067 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 7140 0.31181912394548145 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 7128 0.3112950581909512 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 6056 0.26447851745291817 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3872 0.16909855012841793 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3581 0.15638995558106009 No Hit TTACTGGGAATTCCTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCAT 2927 0.12782837195916305 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2878 0.1256884367948313 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04882545946373225 0.0 2 0.0 0.0 0.0 0.1513239866206013 0.0 3 0.0 0.0 0.0 0.23128768633267083 0.0 4 0.0 0.0 0.0 0.29164259239606793 0.0 5 0.0 0.0 0.0 0.6174368031290219 0.0 6 0.0 0.0 0.0 0.7101527695346602 0.0 7 0.0 0.0 0.0 0.9998737874974506 0.0 8 0.0 0.0 0.0 1.3012115963523276 0.0 9 0.0 0.0 0.0 1.5680920818468427 0.0 10 0.0 0.0 0.0 1.7563627041618246 0.0 11 0.0 0.0 0.0 1.9755532059940895 0.0 12 0.0 0.0 0.0 2.165002976256764 0.0 13 0.0 0.0 0.0 2.256627139007131 0.0 14 0.0 0.0 0.0 2.3257601464589097 0.0 15 0.0 0.0 0.0 2.541282188009463 0.0 16 0.0 0.0 0.0 2.7914799136514326 0.0 17 0.0 0.0 0.0 3.1179292065775495 0.0 18 0.0 0.0 0.0 3.296198907410246 0.0 19 0.0 0.0 0.0 3.501807371770936 0.0 20 0.0 0.0 0.0 3.7311734836703296 0.0 21 4.367214621085174E-5 0.0 0.0 3.959273103329608 0.0 22 8.734429242170348E-5 0.0 0.0 4.194665971406099 0.0 23 8.734429242170348E-5 0.0 0.0 4.399575681427415 0.0 24 5.24065754530221E-4 0.0 0.0 4.569285641602785 0.0 25 6.114100469519244E-4 0.0 0.0 4.753363737881525 0.0 26 6.114100469519244E-4 0.0 0.0 4.95613351273851 0.0 27 6.114100469519244E-4 0.0 0.0 5.164362305871851 0.0 28 8.734429242170348E-4 0.0 0.0 5.393073335578082 0.0 29 8.734429242170348E-4 0.0 0.0 5.6139233789663585 0.0 30 8.734429242170348E-4 0.0 0.0 5.859928578572087 0.0 31 8.734429242170348E-4 0.0 0.0 6.0777652438718155 0.0 32 8.734429242170348E-4 0.0 0.0 6.34254946634821 0.0 33 8.734429242170348E-4 0.0 0.0 6.593096569159866 0.0 34 8.734429242170348E-4 0.0 0.0 6.886660735989211 0.0 35 8.734429242170348E-4 0.0 0.0 7.142492168492381 0.0 36 8.734429242170348E-4 0.0 0.0 7.4186311489835965 0.0 37 8.734429242170348E-4 0.0 0.0 7.722152565149016 0.0 38 8.734429242170348E-4 0.0 0.0 8.13048713222048 0.0 39 8.734429242170348E-4 0.0 0.0 8.514671002437343 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 25 3.8920236E-5 45.0 22 TGCGATA 20 7.0347567E-4 45.0 45 ACGTATC 25 3.8920236E-5 45.0 23 CGTTTTT 21070 0.0 43.62245 1 ACGTAGG 120 0.0 43.124996 1 CGACGGT 685 0.0 43.029198 27 TACGCGG 235 0.0 42.12766 1 CACGACG 715 0.0 41.53846 25 GACGGTC 715 0.0 41.223778 28 CGGTCTA 710 0.0 41.197186 30 TAGTCAG 1055 0.0 40.734596 33 CATATGC 2560 0.0 40.60547 32 ACGGGTA 300 0.0 40.500004 4 TAGCATA 2565 0.0 40.438595 29 GCATAGG 490 0.0 40.408165 1 CTTACTG 5800 0.0 40.344826 38 TTACGGG 910 0.0 40.302197 2 GCGCGAC 3110 0.0 40.152733 8 GGTACCT 2650 0.0 40.075474 7 ACTTACT 5880 0.0 40.02551 37 >>END_MODULE