##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043403_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1480366 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.518368430509753 31.0 31.0 33.0 30.0 34.0 2 30.55271871955989 31.0 31.0 34.0 26.0 34.0 3 31.48140122104939 31.0 31.0 34.0 28.0 34.0 4 35.10075346231945 37.0 35.0 37.0 32.0 37.0 5 35.414821740029154 37.0 35.0 37.0 33.0 37.0 6 35.84064143596921 37.0 35.0 37.0 35.0 37.0 7 33.788242231988576 37.0 35.0 37.0 32.0 37.0 8 34.79485546141968 37.0 35.0 37.0 32.0 37.0 9 36.737272404256785 39.0 37.0 39.0 32.0 39.0 10 36.643974530622835 39.0 35.0 39.0 32.0 39.0 11 36.51164982173327 39.0 35.0 39.0 32.0 39.0 12 36.49110827997941 39.0 35.0 39.0 32.0 39.0 13 36.53917342062706 39.0 35.0 39.0 32.0 39.0 14 37.89391001954922 40.0 36.0 41.0 33.0 41.0 15 38.02727703824595 40.0 36.0 41.0 33.0 41.0 16 37.99308144067075 40.0 36.0 41.0 33.0 41.0 17 37.92350202585036 40.0 36.0 41.0 33.0 41.0 18 37.65247107809825 39.0 36.0 41.0 33.0 41.0 19 37.35994139287176 38.0 36.0 41.0 33.0 41.0 20 37.06168001696878 38.0 35.0 41.0 33.0 41.0 21 36.96508431023139 38.0 35.0 41.0 32.0 41.0 22 36.87191883628778 38.0 35.0 40.0 32.0 41.0 23 36.79332948743757 38.0 35.0 40.0 32.0 41.0 24 36.642689037710944 38.0 35.0 40.0 32.0 41.0 25 36.54192274072763 38.0 35.0 40.0 32.0 41.0 26 36.29098547251153 38.0 35.0 40.0 31.0 41.0 27 36.20297750691383 37.0 35.0 40.0 31.0 41.0 28 36.09729012960308 37.0 35.0 40.0 31.0 41.0 29 36.01873658270995 37.0 35.0 40.0 31.0 41.0 30 35.82514256609514 37.0 35.0 40.0 30.0 41.0 31 35.41100038774195 37.0 35.0 40.0 29.0 41.0 32 35.21343302939949 37.0 34.0 40.0 26.0 41.0 33 35.03014997642475 37.0 34.0 40.0 25.0 41.0 34 34.79922600221837 37.0 34.0 40.0 23.0 41.0 35 34.55588415297298 37.0 34.0 40.0 22.0 41.0 36 34.386146398931075 37.0 34.0 40.0 21.0 41.0 37 34.2746509984693 37.0 34.0 40.0 21.0 41.0 38 34.157486054124455 37.0 34.0 40.0 20.0 41.0 39 34.03864247084842 37.0 34.0 40.0 20.0 41.0 40 33.96096033008053 37.0 33.0 40.0 18.0 41.0 41 33.8838766899537 36.0 33.0 40.0 18.0 41.0 42 33.797186641681854 36.0 33.0 40.0 18.0 41.0 43 33.64180344590459 36.0 33.0 40.0 18.0 41.0 44 33.45003330257517 36.0 33.0 40.0 18.0 41.0 45 33.26486828257336 35.0 33.0 40.0 17.0 41.0 46 33.270747909638565 35.0 33.0 40.0 17.0 41.0 47 33.24589729837081 35.0 33.0 40.0 17.0 41.0 48 33.16429045249621 35.0 33.0 40.0 17.0 41.0 49 33.08475944462383 35.0 33.0 40.0 15.0 41.0 50 32.98059871680382 35.0 33.0 40.0 15.0 41.0 51 32.53137805110358 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 18.0 14 32.0 15 76.0 16 179.0 17 392.0 18 890.0 19 1617.0 20 2809.0 21 4570.0 22 7006.0 23 11062.0 24 17912.0 25 27062.0 26 34415.0 27 36955.0 28 36198.0 29 36265.0 30 39184.0 31 45382.0 32 55150.0 33 71093.0 34 114340.0 35 155921.0 36 151704.0 37 143288.0 38 189184.0 39 297521.0 40 131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.127322567527216 18.40119267802692 25.384871038648548 30.086613715797313 2 32.27796369276247 20.452509717191557 28.649469117772224 18.62005747227375 3 21.333102759722934 21.819739172610017 38.368011694405304 18.47914637326175 4 22.085078960203084 24.702877531637448 35.2152102925898 17.996833215569662 5 19.47707526381989 31.112576214260528 33.18726585182313 16.22308267009645 6 78.35359634036448 2.0366585020190953 18.22724920729063 1.3824959503257979 7 74.9033009404431 7.173023427990105 16.4995007991267 1.4241748324400858 8 74.11856257168836 3.9813127294196162 19.298470783576494 2.601653915315537 9 37.6504864337603 25.352784378998166 26.166366966007054 10.830362221234479 10 26.35814386442272 24.7076736428694 37.370893414196225 11.563289078511666 11 25.66041100646732 21.68051684515856 38.88788313160394 13.771189016770178 12 20.17555118126193 26.56768663965533 36.961737840507006 16.295024338575733 13 15.331613938715154 29.177379107599066 37.43884958179261 18.05215737189317 14 14.65786163691952 24.434025099198443 43.09589655531132 17.81221670857072 15 16.855493844089906 22.969589952754927 42.507055687579964 17.6678605155752 16 18.520757704513613 23.56268652481886 36.868720302952106 21.047835467715416 17 18.786908102455744 23.305115086404307 40.558618611883816 17.34935819925613 18 21.72280368503465 25.017326796211208 36.14943871988414 17.11043079887001 19 21.658360162284193 25.329074026288094 36.59912481102646 16.413441000401253 20 18.578175937572194 27.303180429704543 37.19958442709438 16.919059205628876 21 18.74603983069052 24.5973630845345 36.647964084557465 20.008633000217515 22 15.455772423846536 27.085464000118893 37.97506832769734 19.483695248337234 23 15.501031501669182 24.929375573337946 43.236469900011215 16.33312302498166 24 16.25652034699527 25.615422132094363 40.69385543845238 17.434202082457986 25 16.188023772499506 29.13286308926306 36.99389205101981 17.68522108721762 26 15.279194469475794 28.981414055713252 37.666158233842175 18.073233240968786 27 16.210585760548405 26.95623920030587 39.76678740257477 17.06638763657096 28 15.092416334879347 25.239839337028812 39.95282247768458 19.714921850407265 29 16.579683672821453 28.73924421393088 38.53161988319105 16.14945223005662 30 19.190389403701516 28.028474039528064 36.51759092008328 16.263545636687144 31 19.605219249834164 27.269675201943304 36.22867588150498 16.896429666717555 32 18.563584951289073 28.72586914317135 35.436101612709294 17.27444429283029 33 16.877920730413965 28.25713370882606 36.3158840448916 18.549061515868374 34 17.640705068881616 27.721387818958288 36.196589221854595 18.441317890305506 35 20.294238046537142 27.85412526361724 34.74296221339858 17.108674476447042 36 17.99744117333146 30.029668338775682 34.73485610990796 17.238034377984903 37 17.805934478365483 29.057881631974798 35.472443976692254 17.66373991296747 38 17.957383511915296 31.027597229333825 33.59088225479375 17.424137003957128 39 20.351656279595723 28.228897448333722 32.90517345034944 18.514272821721114 40 16.764232628957974 27.91755552343137 35.38584377106743 19.932368076543234 41 18.139838391316744 28.523351657630613 32.5326979949553 20.804111956097344 42 17.481285033566024 28.00469613595557 34.09656801088379 20.417450819594613 43 17.66637439660192 28.892787324215767 34.036515294190764 19.40432298499155 44 16.024753338025867 32.781893126429544 32.51256783795359 18.680785697591002 45 18.32925100954764 30.575817061456423 33.17395833192602 17.920973597069914 46 17.376851400261828 29.827623709271894 33.326015323237634 19.469509567228645 47 16.94378282127528 28.890558145755847 35.4654862378628 18.700172795106077 48 18.21056414427243 27.86135320589638 34.37082451231655 19.55725813751464 49 18.33364181560506 29.67279713260099 33.51326631387103 18.480294737922918 50 17.04402830110932 28.720465074177604 33.96410076967452 20.27140585503855 51 16.880014807149042 28.02185405501072 34.96169190592056 20.136439231919674 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1034.0 1 7492.5 2 13951.0 3 54477.5 4 95004.0 5 57965.5 6 20927.0 7 20378.0 8 19829.0 9 21875.0 10 23921.0 11 25319.5 12 26718.0 13 26180.0 14 25642.0 15 23665.0 16 21688.0 17 19332.5 18 16977.0 19 15050.5 20 13124.0 21 12923.5 22 12723.0 23 12798.5 24 12874.0 25 12699.5 26 13314.0 27 14103.0 28 16884.5 29 19666.0 30 22161.5 31 24657.0 32 27710.0 33 30763.0 34 37061.0 35 43359.0 36 47674.0 37 51989.0 38 56278.0 39 60567.0 40 66858.5 41 73150.0 42 82751.0 43 92352.0 44 97836.0 45 103320.0 46 105750.5 47 108181.0 48 108256.5 49 108332.0 50 104703.0 51 101074.0 52 89261.5 53 77449.0 54 70511.0 55 63573.0 56 57472.0 57 51371.0 58 47324.5 59 43278.0 60 34782.5 61 26287.0 62 22102.0 63 17917.0 64 15831.5 65 13746.0 66 11888.5 67 10031.0 68 8127.5 69 6224.0 70 6062.0 71 5900.0 72 6059.5 73 6219.0 74 5332.0 75 3645.0 76 2845.0 77 2163.0 78 1481.0 79 1088.0 80 695.0 81 466.0 82 237.0 83 182.0 84 127.0 85 93.5 86 60.0 87 34.5 88 9.0 89 7.0 90 5.0 91 4.5 92 4.0 93 5.5 94 7.0 95 6.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1480366.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.57584362845717 #Duplication Level Percentage of deduplicated Percentage of total 1 78.24919650430623 26.27282785881004 2 9.390602733152033 6.3059481789055045 3 3.402740633658537 3.4274966227174892 4 1.7870347114724496 2.400047921240962 5 1.119926668608897 1.8801241350275653 6 0.7558139889633785 1.522625538338091 7 0.5764029359274685 1.354725039057901 8 0.4197320216571958 1.1274285380014566 9 0.3425835804180676 1.0352279453214617 >10 3.1169359822470053 23.156017892001472 >50 0.6419001263779057 15.003459082793718 >100 0.1912456325083055 9.38396220901193 >500 0.004413360526852942 0.9556347278674611 >1k 0.0010508001254411767 0.5827092655046514 >5k 2.1016002508823534E-4 0.5263294273915228 >10k+ 2.1016002508823534E-4 5.065435618008828 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 71786 4.84920620981568 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7459 0.5038618828046577 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2913 0.19677566223487977 No Hit GCGAAGGGTCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCA 1673 0.11301259283177267 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07106350726779728 0.0 2 0.0 0.0 0.0 0.23082129689549746 0.0 3 0.0 0.0 0.0 0.3745695321292167 0.0 4 0.0 0.0 0.0 0.474679910238414 0.0 5 0.0 0.0 0.0 1.0386620605985277 0.0 6 0.0 0.0 0.0 1.2044318769817735 0.0 7 0.0 0.0 0.0 1.671613641491361 0.0 8 0.0 0.0 0.0 2.212155642591089 0.0 9 0.0 0.0 0.0 2.639955254308732 0.0 10 0.0 0.0 0.0 2.9597410370138197 0.0 11 0.0 0.0 0.0 3.3056014526137454 0.0 12 0.0 0.0 0.0 3.59985300932337 0.0 13 0.0 0.0 0.0 3.7303612755224047 0.0 14 0.0 0.0 0.0 3.8333087898533202 0.0 15 0.0 0.0 0.0 4.177818188204808 0.0 16 0.0 0.0 0.0 4.599538222304484 0.0 17 0.0 0.0 0.0 5.101913986135861 0.0 18 0.0 0.0 0.0 5.388397193666972 0.0 19 0.0 0.0 0.0 5.693524439226516 0.0 20 0.0 0.0 0.0 6.058704401479094 0.0 21 1.351017248437211E-4 0.0 0.0 6.4490808354150255 0.0 22 2.0265258726558162E-4 0.0 0.0 6.843105015921738 0.0 23 2.0265258726558162E-4 0.0 0.0 7.1728207754028395 0.0 24 6.755086242186054E-4 0.0 0.0 7.466329272625823 0.0 25 7.430594866404659E-4 0.0 0.0 7.750515750834591 0.0 26 7.430594866404659E-4 0.0 0.0 8.07070683871421 0.0 27 9.457120739060475E-4 0.0 0.0 8.385021001563127 0.0 28 0.001013262936327908 0.0 0.0 8.706360454103917 0.0 29 0.001013262936327908 0.0 0.0 9.092548734569695 0.0 30 0.001013262936327908 0.0 0.0 9.45259483127821 0.0 31 0.001013262936327908 6.755086242186054E-5 0.0 9.773934283819 0.0 32 0.001013262936327908 6.755086242186054E-5 0.0 10.127968353771973 0.0 33 0.001013262936327908 6.755086242186054E-5 0.0 10.48004344871471 0.0 34 0.001013262936327908 6.755086242186054E-5 0.0 10.890752692239621 0.0 35 0.001013262936327908 6.755086242186054E-5 0.0 11.260796316586573 0.0 36 0.001013262936327908 6.755086242186054E-5 0.0 11.644687867730008 0.0 37 0.001013262936327908 6.755086242186054E-5 0.0 12.041211430146328 0.0 38 0.001013262936327908 6.755086242186054E-5 0.0 12.45009680038585 0.0 39 0.001013262936327908 6.755086242186054E-5 0.0 12.855672178366701 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAT 30 2.165927E-6 45.000004 22 ACCGGCG 65 0.0 45.000004 19 CACGGCA 30 2.165927E-6 45.000004 3 ACGGCAG 20 7.0339453E-4 45.000004 4 GTATCGC 20 7.0339453E-4 45.000004 16 GCGTCAT 65 0.0 45.000004 36 ATCGCCT 20 7.0339453E-4 45.000004 16 TCGCGAT 20 7.0339453E-4 45.000004 45 GATCGTC 25 3.8913517E-5 45.0 8 CTCCGAT 25 3.8913517E-5 45.0 26 TTTCGAT 25 3.8913517E-5 45.0 15 GTCACGG 205 0.0 45.0 1 TGTTCGA 25 3.8913517E-5 45.0 11 ACGTCCG 90 0.0 45.0 39 CGATGTA 45 3.8562575E-10 45.0 9 GCGCTTA 25 3.8913517E-5 45.0 45 CGGACTA 25 3.8913517E-5 45.0 5 CTAGCGA 25 3.8913517E-5 45.0 1 CGTTTTT 19195 0.0 44.29669 1 ATTGCGG 365 0.0 43.767124 1 >>END_MODULE