##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043402_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1258576 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.521223191924843 31.0 31.0 33.0 30.0 34.0 2 30.54091052109686 31.0 31.0 34.0 26.0 34.0 3 31.463890142510266 31.0 31.0 34.0 28.0 34.0 4 35.08905223045728 37.0 35.0 37.0 32.0 37.0 5 35.41856749214986 37.0 35.0 37.0 33.0 37.0 6 35.832214343829854 37.0 35.0 37.0 35.0 37.0 7 33.73136942067861 37.0 35.0 37.0 32.0 37.0 8 34.76565737786196 37.0 35.0 37.0 31.0 37.0 9 36.75514231957387 39.0 37.0 39.0 32.0 39.0 10 36.67805917163525 39.0 35.0 39.0 32.0 39.0 11 36.59693733235021 39.0 35.0 39.0 32.0 39.0 12 36.59578285300212 39.0 35.0 39.0 32.0 39.0 13 36.650559044507446 39.0 35.0 39.0 32.0 39.0 14 38.011776007170006 40.0 36.0 41.0 33.0 41.0 15 38.10906691371836 40.0 37.0 41.0 33.0 41.0 16 38.054011835598324 40.0 36.0 41.0 33.0 41.0 17 38.010894852595314 40.0 36.0 41.0 33.0 41.0 18 37.722286933804554 39.0 36.0 41.0 33.0 41.0 19 37.43407231664993 38.0 36.0 41.0 33.0 41.0 20 37.11579753626321 38.0 35.0 41.0 33.0 41.0 21 37.00240986638868 38.0 35.0 41.0 33.0 41.0 22 36.90170478381917 38.0 35.0 40.0 32.0 41.0 23 36.812577865778465 38.0 35.0 40.0 32.0 41.0 24 36.63641528203303 38.0 35.0 40.0 32.0 41.0 25 36.52340899556324 38.0 35.0 40.0 32.0 41.0 26 36.23954930016145 37.0 35.0 40.0 31.0 41.0 27 36.13428191861278 37.0 35.0 40.0 31.0 41.0 28 36.02244044062496 37.0 35.0 40.0 31.0 41.0 29 35.95007691231996 37.0 35.0 40.0 31.0 41.0 30 35.7749837912053 37.0 35.0 40.0 30.0 41.0 31 35.304866770063946 37.0 35.0 40.0 29.0 41.0 32 35.117933283329734 37.0 34.0 40.0 26.0 41.0 33 34.95099699978388 37.0 34.0 40.0 25.0 41.0 34 34.7199557277431 37.0 34.0 40.0 23.0 41.0 35 34.51370437701021 37.0 34.0 40.0 22.0 41.0 36 34.34189909866389 37.0 34.0 40.0 22.0 41.0 37 34.25329896645097 36.0 34.0 40.0 21.0 41.0 38 34.142689039040945 36.0 34.0 40.0 21.0 41.0 39 34.02972645275295 36.0 34.0 40.0 20.0 41.0 40 33.946624597958326 36.0 33.0 40.0 20.0 41.0 41 33.85955476665692 36.0 33.0 40.0 20.0 41.0 42 33.765166346728364 35.0 33.0 40.0 19.0 41.0 43 33.62061409084553 35.0 33.0 40.0 18.0 41.0 44 33.437453916171926 35.0 33.0 40.0 18.0 41.0 45 33.2492674260434 35.0 33.0 40.0 18.0 41.0 46 33.25157717928834 35.0 33.0 40.0 18.0 41.0 47 33.24365632270121 35.0 33.0 40.0 18.0 41.0 48 33.16781982176682 35.0 33.0 40.0 18.0 41.0 49 33.09754992944407 35.0 33.0 40.0 17.0 41.0 50 32.98584988113551 35.0 33.0 40.0 17.0 41.0 51 32.607467487064746 35.0 32.0 39.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 6.0 12 7.0 13 18.0 14 27.0 15 65.0 16 168.0 17 378.0 18 762.0 19 1386.0 20 2308.0 21 3818.0 22 5902.0 23 9180.0 24 14687.0 25 22293.0 26 27992.0 27 30688.0 28 30482.0 29 30764.0 30 33121.0 31 38617.0 32 46447.0 33 59770.0 34 97721.0 35 135874.0 36 146668.0 37 119569.0 38 154903.0 39 244845.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.587489353046617 18.547946250365495 24.4624877639491 31.402076632638792 2 33.139357496090824 20.197429475852076 27.8680032036206 18.79520982443651 3 21.434382985215038 20.919674298572353 39.398494806829305 18.2474479093833 4 21.334349296347618 24.683769593572418 36.370628392723205 17.61125271735676 5 19.683435883093274 30.86829877575927 33.85985431153939 15.588411029608066 6 77.45428166435718 1.9185968904539732 19.39199539797358 1.2351260472152654 7 73.74930079709131 7.1534813948462395 17.813306466991268 1.2839113410711789 8 72.79838484128094 4.24662475686808 20.552036587381295 2.4029538144696865 9 35.686124636096665 28.058138721857084 26.468246653360623 9.787489988685625 10 24.539082264400403 23.78537331078934 39.85472470474568 11.82081972006458 11 23.756133916426183 22.277240309683325 40.26026239178246 13.706363382108034 12 18.577662373984566 27.382692821093045 38.98111834327049 15.0585264616519 13 14.245623625430644 29.895453274176532 39.09736082683922 16.761562273553604 14 13.990017289381015 25.52551454977689 43.986060436556876 16.498407724285226 15 16.722629384320058 24.719524287766493 42.499618616595264 16.05822771131819 16 17.230266586999914 25.06340499103749 38.11434510113016 19.591983320832433 17 17.35127636312785 25.43334689363217 40.921247505116895 16.294129238123084 18 19.32938495569596 27.11540661827335 37.58199743201841 15.97321099401228 19 20.091675035913603 26.845895678926023 37.87002135747067 15.192407927689707 20 17.200232643876888 29.495795247962775 37.61965904323616 15.684313064924169 21 17.50287626651072 26.639392456236255 37.488320133229934 18.369411144023086 22 14.726802354406884 28.544482017772467 38.41508180674032 18.313633821080334 23 14.662364449981565 26.414296792565565 43.87657161744702 15.046767140005848 24 15.377776153366979 27.91591449384066 40.55527834632156 16.151031006470806 25 15.4035989880627 30.382988393231713 37.68910260484866 16.52431001385693 26 14.131367513761584 30.467766745909664 38.04378917125386 17.35707656907489 27 14.75953776331346 28.841404889335248 40.06305538958315 16.336001957768147 28 13.789234817762297 26.911287041863186 40.046846594881835 19.252631545492687 29 15.031988533072296 30.32792616417284 38.91874626562083 15.72133903713403 30 18.30950216752902 29.704364297428203 35.861322637647625 16.12481089739515 31 18.062953687341885 29.07651186738028 36.30054919210282 16.559985253175018 32 17.084625799316054 30.619763923672465 35.36115419331053 16.934456083700944 33 15.808659945843557 29.412447083052594 35.99464791955353 18.784245051550325 34 15.47653856421861 30.01177521262125 36.392716848247545 18.1189693749126 35 18.722826432412504 31.1522705025362 33.64667687926673 16.47822618578457 36 16.05449333214681 32.692423818664906 34.91342596712475 16.33965688206354 37 16.12187106698364 32.17970150392189 35.13399270286419 16.564434726230278 38 15.88525444629486 34.04283889093706 33.54640482577135 16.525501836996735 39 18.108640241034312 31.030148358144444 33.62252259696673 17.238688803854515 40 15.38452981782586 30.506699635143207 35.36846404190132 18.740306505129606 41 15.970350618476756 31.056924651352002 32.87858659310204 20.094138137069194 42 15.805005021548164 30.23877779331562 34.250692846518604 19.70552433861761 43 16.190837899340206 31.080522749520096 34.061908061173895 18.666731289965803 44 14.934497400236458 34.08431433620218 32.9229224139027 18.05826584965866 45 17.03655559934402 32.482186216803754 33.07348940389774 17.407768779954488 46 15.594052325803128 32.531607149667565 33.201809028616466 18.672531495912843 47 15.434824754325524 31.015210841458916 35.186432921015495 18.36353148320006 48 16.60328816058784 29.961957005377503 34.828250340066866 18.606504493967783 49 16.761800638181565 31.509261260345024 33.78031998067657 17.948618120796837 50 15.102941737328537 31.154018509807912 34.12253213155185 19.620507621311706 51 15.404870266078488 30.218119525559047 34.808307166194176 19.56870304216829 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1009.0 1 7669.5 2 14330.0 3 57433.5 4 100537.0 5 59502.5 6 18468.0 7 18424.5 8 18381.0 9 21287.0 10 24193.0 11 26997.5 12 29802.0 13 28993.0 14 28184.0 15 25543.5 16 22903.0 17 19941.0 18 16979.0 19 15004.5 20 13030.0 21 12441.0 22 11852.0 23 11197.0 24 10542.0 25 11078.5 26 13375.5 27 15136.0 28 16568.0 29 18000.0 30 21181.5 31 24363.0 32 26916.0 33 29469.0 34 35375.5 35 41282.0 36 43111.0 37 44940.0 38 47257.0 39 49574.0 40 54468.5 41 59363.0 42 65820.5 43 72278.0 44 77019.5 45 81761.0 46 81944.5 47 82128.0 48 82970.5 49 83813.0 50 78815.5 51 73818.0 52 67873.0 53 61928.0 54 56216.5 55 50505.0 56 45728.5 57 40952.0 58 35834.0 59 30716.0 60 27355.0 61 23994.0 62 20114.0 63 16234.0 64 13734.0 65 11234.0 66 9277.0 67 7320.0 68 6075.5 69 4831.0 70 4400.0 71 3969.0 72 3862.5 73 3756.0 74 3172.0 75 2059.5 76 1531.0 77 1126.5 78 722.0 79 516.5 80 311.0 81 217.0 82 123.0 83 91.0 84 59.0 85 39.0 86 19.0 87 21.0 88 23.0 89 12.5 90 2.0 91 4.0 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1258576.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.251436931658056 #Duplication Level Percentage of deduplicated Percentage of total 1 78.10969456804366 26.75369277248421 2 8.900527688753067 6.097117255796038 3 3.4138639038986565 3.507892325929464 4 1.908510497755966 2.6147690778918316 5 1.2465382631775062 2.134786335206146 6 0.8422311941467846 1.7308577176916184 7 0.6021064134019242 1.4436106891347986 8 0.4528604316126365 1.2408896409778931 9 0.3784022925984448 1.1664740033757404 >10 3.4624575422417743 26.328815096037435 >50 0.5776320850357678 13.270695898023071 >100 0.10154839108993662 5.366911946209362 >500 0.0021760369463673986 0.5310847015194797 >1k 9.67127531718844E-4 0.5894684087658906 >5k 2.41781882929711E-4 0.663089849534769 >10k+ 2.41781882929711E-4 6.559844281422271 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 79212 6.293779636668743 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8007 0.6361951920265443 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3295 0.26180381637660344 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1435 0.11401774704110042 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06674209582893684 0.0 2 0.0 0.0 0.0 0.21842145408779445 0.0 3 0.0 0.0 0.0 0.36056622722823256 0.0 4 0.0 0.0 0.0 0.44868168469762654 0.0 5 0.0 0.0 0.0 0.967760389519584 0.0 6 0.0 0.0 0.0 1.1493147811494895 0.0 7 0.0 0.0 0.0 1.603558307166194 0.0 8 0.0 0.0 0.0 2.106110397782891 0.0 9 0.0 0.0 0.0 2.4967105681341453 0.0 10 0.0 0.0 0.0 2.769240792768971 0.0 11 0.0 0.0 0.0 3.068865130115305 0.0 12 0.0 0.0 0.0 3.3184328955899365 0.0 13 0.0 0.0 0.0 3.4377741193221545 0.0 14 0.0 0.0 0.0 3.5347090680260864 0.0 15 0.0 0.0 0.0 3.8304401164490662 0.0 16 0.0 0.0 0.0 4.2049904018509805 0.0 17 0.0 0.0 0.0 4.628882165240716 0.0 18 0.0 0.0 0.0 4.877734836831467 0.0 19 0.0 0.0 0.0 5.135963183788663 0.0 20 0.0 0.0 0.0 5.431058593203748 0.0 21 0.0 0.0 0.0 5.750626104422776 0.0 22 0.0 0.0 0.0 6.086958594475026 0.0 23 0.0 0.0 0.0 6.355277710682549 0.0 24 2.3836462796048867E-4 0.0 0.0 6.590225778975604 0.0 25 2.3836462796048867E-4 0.0 0.0 6.83669480428675 0.0 26 2.3836462796048867E-4 0.0 0.0 7.097465707275524 0.0 27 2.3836462796048867E-4 0.0 0.0 7.347033472750156 0.0 28 2.3836462796048867E-4 0.0 0.0 7.612412758546166 0.0 29 2.3836462796048867E-4 0.0 0.0 7.919585309111249 0.0 30 2.3836462796048867E-4 0.0 0.0 8.21301216613061 0.0 31 2.3836462796048867E-4 0.0 0.0 8.477358538538793 0.0 32 2.3836462796048867E-4 0.0 0.0 8.755530059368683 0.0 33 2.3836462796048867E-4 0.0 0.0 9.04331562019298 0.0 34 2.3836462796048867E-4 0.0 0.0 9.377026099337664 0.0 35 2.3836462796048867E-4 0.0 0.0 9.66179237487446 0.0 36 2.3836462796048867E-4 0.0 0.0 9.973970582626714 0.0 37 2.3836462796048867E-4 0.0 0.0 10.290518808558243 0.0 38 2.3836462796048867E-4 0.0 0.0 10.606034121101944 0.0 39 2.3836462796048867E-4 0.0 0.0 10.947610632969324 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTCGG 45 3.8562575E-10 45.000004 1 CTGTCGG 40 6.8157533E-9 45.0 1 CGTGCTA 20 7.0335425E-4 45.0 44 CGCATTA 20 7.0335425E-4 45.0 14 TAGGTCG 20 7.0335425E-4 45.0 41 CGCGATA 20 7.0335425E-4 45.0 10 CAGATCG 20 7.0335425E-4 45.0 17 TGTTACG 20 7.0335425E-4 45.0 14 AGCGATA 20 7.0335425E-4 45.0 7 CGGTCTA 145 0.0 45.0 30 CGATCGA 20 7.0335425E-4 45.0 9 GCGTCAA 20 7.0335425E-4 45.0 22 CCGCATT 20 7.0335425E-4 45.0 13 GCCGTGA 20 7.0335425E-4 45.0 31 CCCGCAT 20 7.0335425E-4 45.0 12 CTTCGTA 30 2.165667E-6 44.999996 19 CAGCGCA 25 3.891019E-5 44.999996 11 CGGTTAG 25 3.891019E-5 44.999996 30 TCGATAT 25 3.891019E-5 44.999996 24 CGTTTTT 17540 0.0 44.40992 1 >>END_MODULE