##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043397_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 861574 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5211531452899 31.0 31.0 33.0 30.0 34.0 2 30.60495906329578 31.0 31.0 34.0 26.0 34.0 3 31.494941815792956 31.0 31.0 34.0 28.0 34.0 4 35.09041359186791 37.0 35.0 37.0 32.0 37.0 5 35.39363769101667 37.0 35.0 37.0 33.0 37.0 6 35.83624389779636 37.0 35.0 37.0 35.0 37.0 7 33.96267180764508 37.0 35.0 37.0 32.0 37.0 8 34.881487835055374 37.0 35.0 37.0 32.0 37.0 9 36.78630042225044 39.0 37.0 39.0 32.0 39.0 10 36.635597174473695 39.0 35.0 39.0 32.0 39.0 11 36.427086936235305 38.0 35.0 39.0 32.0 39.0 12 36.34748843395924 39.0 35.0 39.0 32.0 39.0 13 36.41922458198599 39.0 35.0 39.0 32.0 39.0 14 37.72268545708204 40.0 36.0 41.0 33.0 41.0 15 37.84585653698928 40.0 36.0 41.0 33.0 41.0 16 37.80790042410751 40.0 36.0 41.0 33.0 41.0 17 37.7989238301063 40.0 36.0 41.0 33.0 41.0 18 37.52113457462737 39.0 36.0 41.0 33.0 41.0 19 37.254640924633286 38.0 35.0 41.0 33.0 41.0 20 36.960411990148266 38.0 35.0 41.0 32.0 41.0 21 36.86158704881995 38.0 35.0 40.0 32.0 41.0 22 36.77154370953627 38.0 35.0 40.0 32.0 41.0 23 36.70243647092415 38.0 35.0 40.0 32.0 41.0 24 36.554033663968504 38.0 35.0 40.0 32.0 41.0 25 36.46460083521555 37.0 35.0 40.0 32.0 41.0 26 36.217031851007576 37.0 35.0 40.0 31.0 41.0 27 36.14402941592945 37.0 35.0 40.0 31.0 41.0 28 36.03054293653244 37.0 35.0 40.0 31.0 41.0 29 35.921036382249234 37.0 35.0 40.0 31.0 41.0 30 35.74562602864061 37.0 35.0 40.0 30.0 41.0 31 35.308074524068736 37.0 34.0 40.0 29.0 41.0 32 35.11031437810333 37.0 34.0 40.0 27.0 41.0 33 34.93702108002331 37.0 34.0 40.0 25.0 41.0 34 34.72878127705803 37.0 34.0 40.0 24.0 41.0 35 34.512050038650194 37.0 34.0 40.0 23.0 41.0 36 34.32769442903337 37.0 34.0 40.0 22.0 41.0 37 34.22294312502466 37.0 34.0 40.0 21.0 41.0 38 34.12058047248408 36.0 34.0 40.0 21.0 41.0 39 33.98671269095864 36.0 33.0 40.0 20.0 41.0 40 33.95014705643392 36.0 33.0 40.0 20.0 41.0 41 33.836413355091956 36.0 33.0 40.0 19.0 41.0 42 33.724774656616844 36.0 33.0 40.0 18.0 41.0 43 33.5404585096579 35.0 33.0 40.0 18.0 41.0 44 33.35526722022716 35.0 33.0 40.0 18.0 41.0 45 33.216278578508636 35.0 33.0 40.0 17.0 41.0 46 33.20950260801742 35.0 33.0 40.0 18.0 41.0 47 33.16454419469483 35.0 33.0 40.0 18.0 41.0 48 33.09622736990671 35.0 33.0 40.0 17.0 41.0 49 32.98065169097489 35.0 33.0 40.0 15.0 41.0 50 32.87720845800825 35.0 33.0 40.0 15.0 41.0 51 32.39397312360865 35.0 31.0 39.0 14.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 3.0 12 4.0 13 10.0 14 16.0 15 58.0 16 117.0 17 234.0 18 515.0 19 978.0 20 1647.0 21 2629.0 22 4055.0 23 6502.0 24 10386.0 25 15601.0 26 19709.0 27 21145.0 28 21395.0 29 21274.0 30 23189.0 31 27066.0 32 32695.0 33 42284.0 34 71853.0 35 98674.0 36 84019.0 37 81383.0 38 108784.0 39 165265.0 40 82.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.764124729854892 18.066469043866228 24.93401611469241 31.23539011158647 2 31.665881282397102 20.255137689856006 28.87308577092623 19.205895256820657 3 22.289089503629402 21.90328398953543 37.56032563656749 18.247300870267676 4 22.98154308277641 24.77512088340642 34.1848755881677 18.058460445649473 5 19.902295101755623 31.25500537388547 32.67171479176484 16.170984732594064 6 79.32934373599946 1.9965783554285528 17.412317456190646 1.2617604523813393 7 76.17685770461968 6.396316509086858 15.936065851569337 1.4907599347241212 8 75.26677917393052 3.9146956616610993 18.691720037977007 2.1268051264313916 9 38.6960377170156 27.43014529222098 24.429706560318674 9.444110430444743 10 28.15741886361473 22.290482303319273 37.835751775239274 11.716347057826722 11 26.741986178784412 21.387483837720264 37.788628719065336 14.081901264429986 12 18.530271340592915 29.5256124256303 37.55324557147732 14.390870662299465 13 15.034924452223489 31.495147253747213 37.80023538314759 15.669692910881711 14 14.758105513861839 23.539359358569317 46.82998790585602 14.872547221712818 15 16.31165750127093 23.16167850933292 44.43460457256138 16.09205941683477 16 16.732166940970828 21.9418181142885 37.73570233085028 23.59031261389039 17 18.534914006225815 21.858714399459593 41.35268705880168 18.25368453551291 18 20.94585026939067 24.026026783538036 38.616416001411366 16.411706945659922 19 22.54385578023478 24.19548407913888 36.262816658812824 16.99784348181352 20 18.58772432780005 26.429418715049437 38.414227913098586 16.56862904405193 21 18.372536775715144 23.677478661148086 36.859283125999625 21.090701437137145 22 15.28539626311843 26.445203778201293 37.993254206835395 20.27614575184488 23 15.054771847804135 23.98993005824224 44.75576096771722 16.1995371262364 24 15.388347373527985 24.398252500655776 42.79771673704174 17.4156833887745 25 15.327412387096176 29.216991227683287 37.77690598834227 17.67869039687827 26 15.589142662150902 28.469986327349712 37.30486296011718 18.63600805038221 27 15.438139962440836 26.503933498457478 41.764375433799074 16.29355110530262 28 15.05825384702881 23.946637201215452 40.56621950058846 20.428889451167283 29 16.820841854559212 27.25186693191763 38.85110274915446 17.076188464368702 30 21.111129165921906 26.32519087159083 35.76639963601502 16.797280326472247 31 20.861818021435187 25.396657745010877 37.32157655639562 16.419947677158316 32 20.753759978829443 27.213564940446204 34.88173969966596 17.15093538105839 33 17.11994558795878 26.821491827747817 36.36611596914484 19.692446615148555 34 16.32430876512058 26.844124822708203 37.392493273938165 19.43907313823305 35 22.009484965888014 27.19313721166145 34.22828451183532 16.569093310615223 36 18.1684916211492 31.05386188534009 34.22631137894133 16.551335114569383 37 17.053787602689958 29.634366868080974 35.052705861597495 18.25913966763157 38 17.65153080292581 29.72803264722473 34.16734952540351 18.453087024445956 39 19.775666396618284 27.552595598288715 33.131338689421916 19.54039931567109 40 16.588824639555046 26.710880319043984 34.568824036008515 22.131471005392456 41 19.069168753931756 27.27380352703308 31.829419179315998 21.827608539719165 42 18.38483983964233 27.163192018329248 33.50298407333555 20.94898406869288 43 17.8315501628415 28.711869206823792 34.4758546567097 18.980725973625017 44 16.309568301736125 32.020116670187356 32.42356431368635 19.246750714390174 45 18.71296023324752 29.765406105569575 33.041735242706956 18.47989841847595 46 18.09722670368419 28.62493529284774 32.985326855267225 20.292511148200852 47 17.8093814344444 27.925053448688097 35.08973112001987 19.17583399684763 48 18.940682982541258 25.917100562458938 35.12037271319701 20.021843741802794 49 18.763797421927777 29.603841341544662 33.00819198350925 18.624169253018312 50 17.422995587146318 28.114938473073696 33.90353005081398 20.55853588896601 51 17.18169304087635 26.306736275700054 35.581273343903135 20.93029733952046 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 440.0 1 3948.0 2 7456.0 3 29370.0 4 51284.0 5 31016.0 6 10748.0 7 10613.0 8 10478.0 9 11321.5 10 12165.0 11 13123.5 12 14082.0 13 13973.0 14 13864.0 15 12750.0 16 11636.0 17 10635.0 18 9634.0 19 9150.5 20 8667.0 21 8289.5 22 7912.0 23 7597.5 24 7283.0 25 8396.5 26 9534.0 27 9558.0 28 11138.5 29 12719.0 30 14003.0 31 15287.0 32 16790.5 33 18294.0 34 20671.5 35 23049.0 36 26024.0 37 28999.0 38 30879.0 39 32759.0 40 38285.0 41 43811.0 42 51248.5 43 58686.0 44 65018.0 45 71350.0 46 71521.0 47 71692.0 48 66916.5 49 62141.0 50 57387.0 51 52633.0 52 46877.0 53 41121.0 54 36751.0 55 32381.0 56 30223.0 57 28065.0 58 25265.0 59 22465.0 60 19088.5 61 15712.0 62 13757.5 63 11803.0 64 9978.5 65 8154.0 66 7473.0 67 6792.0 68 5515.0 69 4238.0 70 3853.0 71 3468.0 72 3677.5 73 3887.0 74 3517.5 75 2534.5 76 1921.0 77 1577.5 78 1234.0 79 878.0 80 522.0 81 393.0 82 264.0 83 214.0 84 164.0 85 107.5 86 51.0 87 34.0 88 17.0 89 12.0 90 7.0 91 7.0 92 7.0 93 10.5 94 14.0 95 8.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 861574.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.33788913317736 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94313121773429 27.896836187981673 2 9.38948437893495 6.636091160010079 3 3.4123614286607844 3.6175694954503657 4 1.7196282724195822 2.4307213296416204 5 1.034015807694736 1.8269967987134719 6 0.6786496631344698 1.4389227933668436 7 0.5107656750879084 1.2634566559502296 8 0.3919880580825927 1.108162443044172 9 0.304442650075838 0.9682524554211607 >10 2.798521479753274 22.27356579580154 >50 0.6326128948529716 15.54313023553124 >100 0.18064915155524383 8.984599745866774 >500 0.002385932190352263 0.5503282645672531 >1k 0.0010225423672938268 0.7895385804855208 >5k 0.0 0.0 >10k+ 3.4084745576460897E-4 4.671828058168099 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38787 4.501876797582099 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4032 0.4679806957962984 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1489 0.17282322818469453 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1034 0.12001290661045945 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08380011467384113 0.0 2 0.0 0.0 0.0 0.2744976055451998 0.0 3 0.0 0.0 0.0 0.4511510328770367 0.0 4 0.0 0.0 0.0 0.5804492707532957 0.0 5 0.0 0.0 0.0 1.2582784531566644 0.0 6 0.0 0.0 0.0 1.4314498812638263 0.0 7 0.0 0.0 0.0 2.009345685919027 0.0 8 0.0 0.0 0.0 2.622873949306734 0.0 9 0.0 0.0 0.0 3.149584365359215 0.0 10 0.0 0.0 0.0 3.4991770875165686 0.0 11 0.0 0.0 0.0 3.9281593919965085 0.0 12 0.0 0.0 0.0 4.288082045187065 0.0 13 0.0 0.0 0.0 4.457191140865439 0.0 14 0.0 0.0 0.0 4.587185778586633 0.0 15 0.0 0.0 0.0 5.0412384774842325 0.0 16 0.0 0.0 0.0 5.591974688186969 0.0 17 0.0 0.0 0.0 6.299632997281719 0.0 18 0.0 0.0 0.0 6.675224646983312 0.0 19 0.0 0.0 0.0 7.079020490404771 0.0 20 0.0 0.0 0.0 7.532376789457435 0.0 21 0.0 0.0 0.0 8.004187684400875 0.0 22 0.0 0.0 0.0 8.49387284203098 0.0 23 1.1606664082249465E-4 0.0 0.0 8.903588084134386 0.0 24 0.0019731328939824088 0.0 0.0 9.244127608307586 0.0 25 0.0019731328939824088 0.0 0.0 9.586640265374768 0.0 26 0.0019731328939824088 0.0 0.0 9.937741853862814 0.0 27 0.0019731328939824088 0.0 0.0 10.30137863955969 0.0 28 0.0019731328939824088 0.0 0.0 10.669774157530288 0.0 29 0.0019731328939824088 0.0 0.0 11.140192252783859 0.0 30 0.0019731328939824088 0.0 0.0 11.566505024524881 0.0 31 0.0019731328939824088 0.0 0.0 11.927124077560372 0.0 32 0.0019731328939824088 0.0 0.0 12.312349258450231 0.0 33 0.0019731328939824088 0.0 0.0 12.699431505593251 0.0 34 0.0019731328939824088 0.0 0.0 13.143734606661761 0.0 35 0.0019731328939824088 0.0 0.0 13.564940446206593 0.0 36 0.0019731328939824088 0.0 0.0 13.98951221833528 0.0 37 0.0019731328939824088 0.0 0.0 14.423717521652232 0.0 38 0.0019731328939824088 0.0 0.0 14.855601492152735 0.0 39 0.0019731328939824088 0.0 0.0 15.308029258078818 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTTTCG 25 3.8899903E-5 45.0 44 GATCGGA 20 7.032303E-4 45.0 8 GTCGACA 20 7.032303E-4 45.0 13 ACGTTGG 25 3.8899903E-5 45.0 1 CACATCG 25 3.8899903E-5 45.0 16 TCGATTG 25 3.8899903E-5 45.0 13 CTGGTCG 20 7.032303E-4 45.0 43 ATCGTAA 25 3.8899903E-5 45.0 13 CGTTAGC 20 7.032303E-4 45.0 18 TGGCATA 20 7.032303E-4 45.0 25 CGTTACT 25 3.8899903E-5 45.0 28 AAACGCG 20 7.032303E-4 45.0 20 AACGGAC 50 2.1827873E-11 45.0 14 CCCGTAC 20 7.032303E-4 45.0 36 CATACGT 40 6.8121153E-9 45.0 12 ACGTCTT 20 7.032303E-4 45.0 28 CGTAAGT 20 7.032303E-4 45.0 38 CGTAAGG 20 7.032303E-4 45.0 1 GCGTCAA 25 3.8899903E-5 45.0 22 AATACGT 20 7.032303E-4 45.0 21 >>END_MODULE