##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043395_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 804207 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.506605886295443 31.0 31.0 33.0 30.0 34.0 2 30.552337893104635 31.0 31.0 34.0 26.0 34.0 3 31.46406211336136 31.0 31.0 34.0 28.0 34.0 4 35.081022672023494 37.0 35.0 37.0 32.0 37.0 5 35.39360761594963 37.0 35.0 37.0 33.0 37.0 6 35.79486500366199 37.0 35.0 37.0 35.0 37.0 7 33.76015752163311 37.0 35.0 37.0 32.0 37.0 8 34.770632436673644 37.0 35.0 37.0 31.0 37.0 9 36.744677676269916 39.0 37.0 39.0 32.0 39.0 10 36.6429638140429 39.0 35.0 39.0 32.0 39.0 11 36.188376873118486 38.0 35.0 39.0 32.0 39.0 12 35.96848696915098 38.0 35.0 39.0 31.0 39.0 13 36.057059936061236 38.0 35.0 39.0 31.0 39.0 14 37.42503857837597 39.0 35.0 41.0 32.0 41.0 15 37.6240234168566 40.0 35.0 41.0 33.0 41.0 16 37.59644469645253 40.0 35.0 41.0 33.0 41.0 17 37.59231391917753 39.0 36.0 41.0 33.0 41.0 18 37.30299910346466 39.0 36.0 40.0 33.0 41.0 19 37.00642123234441 38.0 35.0 40.0 32.0 41.0 20 36.69749330707144 38.0 35.0 40.0 32.0 41.0 21 36.58536172900758 37.0 35.0 40.0 32.0 41.0 22 36.50825595897574 37.0 35.0 40.0 32.0 41.0 23 36.411058346918146 37.0 35.0 40.0 32.0 41.0 24 36.26420063491116 37.0 35.0 40.0 32.0 41.0 25 36.17747420751125 36.0 35.0 40.0 31.0 41.0 26 35.88955455498398 36.0 35.0 40.0 31.0 41.0 27 35.823789148813674 36.0 35.0 40.0 31.0 41.0 28 35.71691616710623 36.0 35.0 40.0 31.0 41.0 29 35.694643294574654 36.0 35.0 40.0 31.0 41.0 30 35.50521569695365 35.0 35.0 40.0 30.0 41.0 31 35.06645925738025 35.0 34.0 40.0 29.0 41.0 32 34.92183480123899 35.0 34.0 40.0 27.0 41.0 33 34.80446700911581 35.0 34.0 40.0 25.0 41.0 34 34.60747046469379 35.0 34.0 40.0 24.0 41.0 35 34.37000548366279 35.0 34.0 40.0 23.0 41.0 36 34.183537323102136 35.0 34.0 40.0 23.0 41.0 37 34.111278563852345 35.0 33.0 40.0 22.0 41.0 38 34.03572463308576 35.0 34.0 40.0 22.0 41.0 39 33.9023696635319 35.0 33.0 40.0 21.0 41.0 40 33.85626959228159 35.0 33.0 40.0 21.0 41.0 41 33.78700757392065 35.0 33.0 40.0 21.0 41.0 42 33.69080473062284 35.0 33.0 40.0 21.0 41.0 43 33.538734430314584 35.0 33.0 40.0 20.0 41.0 44 33.33641089918392 35.0 33.0 40.0 18.0 41.0 45 33.1772404368527 35.0 33.0 40.0 18.0 41.0 46 33.18998093774364 35.0 33.0 40.0 19.0 41.0 47 33.19289063636601 35.0 33.0 40.0 19.0 41.0 48 33.14635411032234 35.0 33.0 40.0 18.0 41.0 49 33.05207987495757 35.0 33.0 40.0 18.0 41.0 50 32.93758447762827 35.0 33.0 39.0 18.0 41.0 51 32.522937502409206 35.0 32.0 39.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 9.0 14 15.0 15 54.0 16 100.0 17 256.0 18 536.0 19 932.0 20 1660.0 21 2511.0 22 3938.0 23 5951.0 24 9284.0 25 13857.0 26 17528.0 27 19531.0 28 19490.0 29 20134.0 30 22104.0 31 25924.0 32 32341.0 33 42609.0 34 76133.0 35 108453.0 36 82411.0 37 69398.0 38 88211.0 39 140767.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.96943324293372 18.498844203047227 24.72970267605231 30.802019877966742 2 30.953473421643928 21.59879235072562 29.500862340168638 17.94687188746181 3 20.89051699375907 21.499439820842145 38.118792798371565 19.491250387027222 4 22.110352185444793 25.868215521625654 34.52568803803001 17.49574425489955 5 19.849491486644606 31.48070086432971 32.34254364858799 16.3272640004377 6 79.45516515026604 2.1688445885201197 17.0676206499073 1.3083696113065417 7 76.12480368860255 7.159475110263899 15.464550793514606 1.251170407618934 8 75.70240000397908 3.832844031449614 18.172187011552996 2.292568953018315 9 43.523744508565585 22.698509214667368 23.75545102193838 10.02229525482867 10 34.248644938430026 22.06036505526562 33.831961174175305 9.859028832129042 11 32.1989239088941 20.453937854308656 35.1082494929788 12.238888743818444 12 18.767929152568925 33.978565220148546 33.04621820004054 14.20728742724199 13 13.562179886521752 35.52045679781449 34.25784654945804 16.659516766205716 14 12.085570008716662 24.056368571773188 47.62231614497263 16.235745274537525 15 14.347301130181659 20.910039330669843 46.69631077570824 18.04634876344026 16 15.553955635800234 23.15112900036931 34.43678058012427 26.858134783706184 17 17.828743097237403 23.16791572319067 41.10098519411047 17.902355985461455 18 21.920351352325955 24.937982385132187 34.41153832284474 18.730127939697116 19 23.25607710452657 24.67648254740384 35.598546145457576 16.468894202612013 20 17.40857764232343 30.047487773670213 36.14106815782504 16.40286642618132 21 19.453076135870493 25.740387735993348 32.740078114216864 22.066458013919302 22 15.014417929712126 29.431228526983727 34.12181192155751 21.43254162174664 23 14.203805736582744 24.487849521329707 46.788202539893334 14.520142202194211 24 14.043523620162471 26.78874966271122 42.13952377932547 17.02820293780084 25 14.035192431799276 32.00171100226683 35.934777986264734 18.028318579669165 26 13.782148128529098 34.01910204710976 35.486385967791875 16.712363856569265 27 14.295075770292973 29.303773779636337 40.81648132881211 15.584669121258582 28 12.403398627467805 25.478390513885106 40.713149723889494 21.405061134757595 29 14.202810967822959 31.636382175235976 37.22959387321921 16.931212983721853 30 21.202003961666584 29.291214824044058 33.56822310673744 15.938558107551911 31 20.71494030765711 27.310630223313154 34.92906677012262 17.04536269890712 32 19.126916328756153 30.802517262346633 32.95009866862636 17.12046774027085 33 15.554950404560019 29.669475644952108 33.241690261338185 21.533883689149686 34 15.830252658830377 28.790473099587544 35.52903667836763 19.850237563214446 35 23.26291613975009 28.075856091777368 31.131288337455405 17.529939431017137 36 16.082053501150824 33.051067697744486 33.48777118328987 17.379107617814814 37 16.90820895615184 31.450982147631144 33.44661262585379 18.19419627036323 38 15.760370153455517 33.243182414477864 33.36529027974141 17.631157152325212 39 19.831088264588594 29.658035804214588 31.12171368814248 19.38916224305434 40 14.70616396027391 27.733406946221557 34.35197654335265 23.20845255015189 41 16.537781939227088 28.124226722721886 32.172313844569864 23.16567749348116 42 16.566008502785976 29.16910695878051 32.72092881559101 21.543955722842504 43 16.467402049472337 29.864450321869867 33.39413857377516 20.274009054882637 44 14.1393944593867 36.878813539300204 29.73065392367885 19.25113807763424 45 17.886812723589824 32.407701002353875 31.394902058798298 18.31058421525801 46 16.433331219449716 31.55244856112916 31.1253197248967 20.88890049452442 47 14.912454131834215 29.517400370800058 35.32423865994701 20.245906837418726 48 16.876376355838733 27.631940532723544 35.68484233536888 19.80684077606885 49 17.2407104141098 31.474483559581053 32.08241161790434 19.202394408404803 50 14.730784487078575 31.651055014442797 31.539267875062016 22.078892623416607 51 14.857368811761152 28.634170058206408 35.19230745318059 21.316153676851858 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 756.0 1 4574.0 2 8392.0 3 30800.5 4 53209.0 5 31644.0 6 10079.0 7 9958.5 8 9838.0 9 11561.0 10 13284.0 11 14537.0 12 15790.0 13 15652.5 14 15515.0 15 13792.0 16 12069.0 17 10482.0 18 8895.0 19 7931.0 20 6967.0 21 6586.0 22 6205.0 23 5629.0 24 5053.0 25 5034.5 26 5841.0 27 6666.0 28 6971.0 29 7276.0 30 8921.5 31 10567.0 32 12981.0 33 15395.0 34 18791.0 35 22187.0 36 24002.5 37 25818.0 38 27511.0 39 29204.0 40 35388.5 41 41573.0 42 49578.5 43 57584.0 44 61934.0 45 66284.0 46 62749.5 47 59215.0 48 56149.5 49 53084.0 50 53654.5 51 54225.0 52 51163.5 53 48102.0 54 44443.5 55 40785.0 56 35043.5 57 29302.0 58 25521.5 59 21741.0 60 17805.5 61 13870.0 62 12055.0 63 10240.0 64 8116.0 65 5992.0 66 4804.0 67 3616.0 68 3193.5 69 2771.0 70 2561.5 71 2352.0 72 2275.0 73 2198.0 74 1885.0 75 1196.5 76 821.0 77 588.5 78 356.0 79 261.0 80 166.0 81 126.0 82 86.0 83 72.0 84 58.0 85 34.5 86 11.0 87 11.0 88 11.0 89 8.0 90 5.0 91 5.0 92 5.0 93 2.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 804207.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.58834402074905 #Duplication Level Percentage of deduplicated Percentage of total 1 79.50966998726075 25.91088478521079 2 8.947001488913285 5.8313592494972015 3 3.164715717567616 3.0939853359589544 4 1.7170807823254919 2.2382727698336016 5 1.0508275740660376 1.7122365245076592 6 0.7060598459593886 1.3805592695616982 7 0.5060073416190457 1.1542958927994305 8 0.37166834458436127 0.9689644699949974 9 0.32069661907210506 0.9405874573751585 >10 2.6915978265057734 19.616848185820118 >50 0.7279962215793611 16.898576074376205 >100 0.2827131295157706 13.26383872085535 >500 0.0019825605155383633 0.4016055913843273 >1k 0.0015860484124306908 1.1297418550428486 >5k 0.0 0.0 >10k+ 3.965121031076727E-4 5.45824381778165 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42241 5.252503397757045 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4608 0.5729868056358625 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1804 0.22432035533140102 No Hit GTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATT 1169 0.14536058502350763 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1162 0.1444901623586962 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 822 0.10221249006785565 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.05757224197252697 0.0 2 0.0 0.0 0.0 0.2136265911637178 0.0 3 0.0 0.0 0.0 0.3461795284050002 0.0 4 0.0 0.0 0.0 0.4379469464951188 0.0 5 0.0 0.0 0.0 0.9691534642200329 0.0 6 0.0 0.0 0.0 1.1271973509307927 0.0 7 0.0 0.0 0.0 1.5590513387722316 0.0 8 0.0 0.0 0.0 2.055813988189608 0.0 9 0.0 0.0 0.0 2.414055087806995 0.0 10 0.0 0.0 0.0 2.6826426529488057 0.0 11 0.0 0.0 0.0 2.9785863589846895 0.0 12 0.0 0.0 0.0 3.224915973126322 0.0 13 0.0 0.0 0.0 3.336330074222184 0.0 14 0.0 0.0 0.0 3.4360556423905786 0.0 15 0.0 0.0 0.0 3.756619875231128 0.0 16 0.0 0.0 0.0 4.15813341589914 0.0 17 0.0 0.0 0.0 4.610504509411134 0.0 18 0.0 0.0 0.0 4.865040965820989 0.0 19 1.2434609497306043E-4 0.0 0.0 5.141337988851129 0.0 20 1.2434609497306043E-4 0.0 0.0 5.455187532563134 0.0 21 8.70422664811423E-4 0.0 0.0 5.791792411655208 0.0 22 8.70422664811423E-4 0.0 0.0 6.132127673596474 0.0 23 8.70422664811423E-4 0.0 0.0 6.403202160637746 0.0 24 0.0018651914245959064 0.0 0.0 6.658982077997331 0.0 25 0.0018651914245959064 0.0 0.0 6.897975272535554 0.0 26 0.0018651914245959064 0.0 0.0 7.157982957124223 0.0 27 0.0018651914245959064 0.0 0.0 7.412395067439105 0.0 28 0.0018651914245959064 0.0 0.0 7.681231324770861 0.0 29 0.0018651914245959064 0.0 0.0 7.994459138008001 0.0 30 0.0018651914245959064 0.0 0.0 8.299728801166864 0.0 31 0.0018651914245959064 0.0 0.0 8.582491821135603 0.0 32 0.0018651914245959064 0.0 0.0 8.872093876327861 0.0 33 0.0018651914245959064 0.0 0.0 9.171021888643098 0.0 34 0.0018651914245959064 0.0 0.0 9.54406017356228 0.0 35 0.0018651914245959064 0.0 0.0 9.83950649521827 0.0 36 0.0018651914245959064 0.0 0.0 10.138061469248589 0.0 37 0.0018651914245959064 0.0 0.0 10.444325901167236 0.0 38 0.0018651914245959064 0.0 0.0 10.756807637834537 0.0 39 0.0018651914245959064 0.0 0.0 11.101619359194833 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTTACT 30 2.1646847E-6 45.000004 8 TTTAGCG 25 3.8897575E-5 45.0 23 AACCGTA 20 7.0320227E-4 45.0 36 AACCGGT 25 3.8897575E-5 45.0 35 CGAACCT 20 7.0320227E-4 45.0 23 CTCGTCG 20 7.0320227E-4 45.0 39 TTTACGG 50 2.1827873E-11 45.0 1 CGCGGAT 20 7.0320227E-4 45.0 22 CCCTAAG 35 1.2113196E-7 45.0 18 TTATGTC 20 7.0320227E-4 45.0 14 TAGGTCG 20 7.0320227E-4 45.0 1 CATTGCG 20 7.0320227E-4 45.0 12 CGCATAC 25 3.8897575E-5 45.0 23 CAACCCG 25 3.8897575E-5 45.0 22 GCACGCT 25 3.8897575E-5 45.0 23 ATTGTCG 25 3.8897575E-5 45.0 35 TACGGTA 20 7.0320227E-4 45.0 44 TTATCGG 20 7.0320227E-4 45.0 1 ATCCGGA 25 3.8897575E-5 45.0 10 CCGTATG 20 7.0320227E-4 45.0 34 >>END_MODULE