##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043394_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1136632 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50852958565305 31.0 31.0 33.0 30.0 34.0 2 30.51858825019883 31.0 31.0 34.0 26.0 34.0 3 31.442108791587778 31.0 31.0 34.0 28.0 34.0 4 35.054225993989256 37.0 35.0 37.0 32.0 37.0 5 35.366725554093144 37.0 35.0 37.0 33.0 37.0 6 35.813810450524 37.0 35.0 37.0 35.0 37.0 7 33.700002287459796 37.0 35.0 37.0 32.0 37.0 8 34.74198157363157 37.0 35.0 37.0 31.0 37.0 9 36.72992314135094 39.0 37.0 39.0 32.0 39.0 10 36.67799340507746 39.0 35.0 39.0 32.0 39.0 11 36.343510476565854 38.0 35.0 39.0 32.0 39.0 12 36.25858237318675 39.0 35.0 39.0 32.0 39.0 13 36.284210720796175 39.0 35.0 39.0 32.0 39.0 14 37.628641460032796 40.0 35.0 41.0 32.0 41.0 15 37.80829327346054 40.0 35.0 41.0 33.0 41.0 16 37.769782128252594 40.0 35.0 41.0 33.0 41.0 17 37.70868583675279 40.0 36.0 41.0 33.0 41.0 18 37.42241992131138 39.0 36.0 41.0 33.0 41.0 19 37.10622259447209 38.0 35.0 41.0 32.0 41.0 20 36.80381073205752 38.0 35.0 40.0 32.0 41.0 21 36.67452174494471 38.0 35.0 40.0 32.0 41.0 22 36.60310812998402 38.0 35.0 40.0 32.0 41.0 23 36.49920114865673 37.0 35.0 40.0 32.0 41.0 24 36.34006257082327 37.0 35.0 40.0 32.0 41.0 25 36.2319264282547 37.0 35.0 40.0 31.0 41.0 26 35.960080307434595 36.0 35.0 40.0 31.0 41.0 27 35.842788167146445 36.0 35.0 40.0 31.0 41.0 28 35.77499313762062 36.0 35.0 40.0 31.0 41.0 29 35.70169764708366 36.0 35.0 40.0 30.0 41.0 30 35.48479543071108 36.0 35.0 40.0 30.0 41.0 31 35.02009797366254 36.0 34.0 40.0 27.0 41.0 32 34.83451636061628 36.0 34.0 40.0 25.0 41.0 33 34.680432189134216 36.0 34.0 40.0 24.0 41.0 34 34.43376396230266 36.0 34.0 40.0 23.0 41.0 35 34.19979729587061 36.0 34.0 40.0 21.0 41.0 36 34.025050324115455 36.0 33.0 40.0 21.0 41.0 37 33.9406588939956 36.0 33.0 40.0 20.0 41.0 38 33.854940737195506 36.0 33.0 40.0 20.0 41.0 39 33.729047748083815 35.0 33.0 40.0 18.0 41.0 40 33.682299108242596 35.0 33.0 40.0 18.0 41.0 41 33.604584421343056 35.0 33.0 40.0 18.0 41.0 42 33.523412150986424 35.0 33.0 40.0 18.0 41.0 43 33.36278232532605 35.0 33.0 40.0 18.0 41.0 44 33.16204893052457 35.0 33.0 40.0 17.0 41.0 45 32.97727760612054 35.0 33.0 40.0 15.0 41.0 46 32.9998785886725 35.0 33.0 40.0 17.0 41.0 47 32.974827384764815 35.0 33.0 40.0 17.0 41.0 48 32.9033416268414 35.0 33.0 40.0 15.0 41.0 49 32.8144421413439 35.0 33.0 40.0 15.0 41.0 50 32.702678615418186 35.0 32.0 40.0 15.0 41.0 51 32.26687793410708 35.0 31.0 39.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 1.0 13 14.0 14 29.0 15 62.0 16 157.0 17 357.0 18 770.0 19 1406.0 20 2372.0 21 3778.0 22 6039.0 23 9288.0 24 14546.0 25 21703.0 26 27117.0 27 29594.0 28 28839.0 29 29093.0 30 31819.0 31 36475.0 32 44503.0 33 58269.0 34 97959.0 35 135603.0 36 118777.0 37 100987.0 38 131415.0 39 205548.0 40 106.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.375935219138647 18.606813814849485 25.28285320138796 30.734397764623907 2 32.71454613278528 19.68068820867264 29.421747760048987 18.18301789849309 3 20.62347356048396 21.452677735625954 40.10832001914428 17.81552868474581 4 21.904539024064075 24.48224227366465 36.78173762484252 16.83148107742875 5 19.153692663940483 30.641227767650392 34.431196728580574 15.773882839828545 6 77.16217738018989 2.1114133686188667 19.228299044897557 1.4981102062936817 7 73.67732036402283 7.43600391331583 17.37844790574258 1.5082278169187564 8 72.40003800702426 4.233208285531289 20.433086522286896 2.933667185157553 9 40.97729080300396 20.889082834197875 26.435468999641042 11.698157363157117 10 31.13743058439319 23.7680269427572 35.04749118448187 10.04705128836774 11 28.896247862104886 21.250413502347286 37.9188690798781 11.934469555669732 12 20.33349404204703 28.835366239908783 35.913558653988275 14.917581064055913 13 14.70871838906524 31.71774153815835 36.64352226578171 16.930017806994698 14 13.827078597118506 23.924717938611618 45.29108805664454 16.957115407625334 15 16.290056940153015 21.499394702946955 44.95808669824534 17.252461658654692 16 17.636578945516227 23.622245370533296 36.22597287424602 22.51520280970446 17 18.878581634161275 23.084252422947795 40.91746493148178 17.11970101140915 18 22.661160340374018 24.679315732796542 36.35477445646436 16.304749470365078 19 22.127214437038546 24.859321222700046 36.72604677679319 16.287417563468214 20 17.59223741721155 28.390367330851145 37.04593923099121 16.971456020946093 21 18.244867292140288 24.989970368597753 36.24031348756678 20.524848851695186 22 15.280407378993377 29.152707296644824 36.21691101429486 19.349974310066933 23 15.262635575982376 24.99674476875541 45.51807445153753 14.222545203724687 24 15.71124163317591 25.9887984853497 41.396071903659234 16.90388797781516 25 15.727077893284722 29.8946360827427 37.65290788927287 16.72537813469971 26 15.136385391226009 30.61826519049261 37.08192273312734 17.163426685154036 27 15.42812449411947 27.852198424819996 41.17638778426087 15.543289296799667 28 14.64528536940716 25.433209693198854 41.16099142026619 18.760513517127794 29 16.140140344456253 30.09118166653763 38.462316739278855 15.306361249727265 30 20.6686948810169 27.620373172671542 36.33709063267619 15.373841313635372 31 20.129910120425958 27.43948789053977 36.220958058544895 16.209643930489374 32 19.024715123276486 28.536060923852226 36.69191083833642 15.747313114534872 33 16.98773217716904 27.556852173790634 36.04271215309792 19.4127034959424 34 16.43900576439868 27.612279084171483 38.26568317626109 17.683031975168745 35 21.46710632816954 28.196285165295365 34.373042462292105 15.963566044242992 36 16.845469773858206 30.975636793614818 35.84220750427579 16.336685928251185 37 16.908023001288015 31.402951878884284 35.00746063809571 16.681564481731996 38 17.266626313529798 31.388347327895044 34.65703939357681 16.68798696499835 39 20.13228555944228 28.40602763251431 33.91537454514742 17.546312262895995 40 15.708074381154146 27.73888118581916 36.096555437467885 20.456488995558807 41 17.277183820269006 27.941409356766307 33.7738159756192 21.00759084734549 42 17.350822429774983 27.541015913681825 35.45026006658268 19.657901589960513 43 17.70221144574497 29.064200198481128 34.765869692213485 18.467718663560415 44 15.089844382350664 33.6678889913358 33.154530226141794 18.087736400171735 45 17.404665714144947 30.853961528445446 34.381136550792164 17.360236206617447 46 17.288357181568 29.922261558710296 33.69859374010234 19.09078751961937 47 16.164510589179258 28.892112838632027 36.667452614390584 18.275923957798128 48 17.46581127400953 26.998096129618034 37.13022332645922 18.405869269913218 49 17.554670289064532 30.15215126795656 34.191101429486416 18.102077013492494 50 15.98406520316162 30.071826237515747 34.32139865849281 19.622709900829822 51 16.078378930031885 27.12399439748309 36.981362481436385 19.816264191048642 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1110.0 1 6807.5 2 12505.0 3 46311.0 4 80117.0 5 48369.0 6 16621.0 7 16496.0 8 16371.0 9 18475.0 10 20579.0 11 22358.0 12 24137.0 13 23161.5 14 22186.0 15 19877.5 16 17569.0 17 15324.5 18 13080.0 19 11456.5 20 9833.0 21 9060.0 22 8287.0 23 7597.0 24 6907.0 25 7015.5 26 7532.0 27 7940.0 28 8975.5 29 10011.0 30 12960.5 31 15910.0 32 18533.5 33 21157.0 34 25278.0 35 29399.0 36 32719.0 37 36039.0 38 40180.5 39 44322.0 40 51023.0 41 57724.0 42 68411.0 43 79098.0 44 87011.0 45 94924.0 46 95576.5 47 96229.0 48 89790.5 49 83352.0 50 76844.0 51 70336.0 52 64389.5 53 58443.0 54 52453.0 55 46463.0 56 42825.0 57 39187.0 58 35289.5 59 31392.0 60 26157.0 61 20922.0 62 16685.0 63 12448.0 64 10457.0 65 8466.0 66 6729.5 67 4993.0 68 4392.5 69 3792.0 70 3205.0 71 2618.0 72 2403.5 73 2189.0 74 1778.5 75 1071.5 76 775.0 77 603.5 78 432.0 79 312.5 80 193.0 81 115.5 82 38.0 83 25.5 84 13.0 85 14.5 86 16.0 87 10.5 88 5.0 89 6.5 90 8.0 91 6.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1136632.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.15684947730441 #Duplication Level Percentage of deduplicated Percentage of total 1 79.38625276863898 27.11584286385642 2 9.240113120943638 6.312263060506747 3 3.255177192916915 3.335597922012522 4 1.6938781995064993 2.3143017077372363 5 1.0002221218241503 1.708221822950877 6 0.7294403109285799 1.494922974183938 7 0.5036911938860558 1.2043153004826832 8 0.4006716404843875 1.0948544731079883 9 0.32275133296508296 0.9921751828818928 >10 2.589910113899681 19.433098276320003 >50 0.6249766579079148 15.148986004909041 >100 0.24733046463888192 12.167070030004828 >500 0.003989201042356431 0.9136589271186509 >1k 0.0010637869446283818 0.5327708895954353 >5k 2.6594673615709544E-4 0.6067138570516474 >10k+ 2.6594673615709544E-4 5.625206707280022 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 61925 5.448113373545704 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6679 0.587613229259778 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2587 0.22760224945276922 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1211 0.1065428388431788 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08833113971804418 0.0 2 0.0 0.0 0.0 0.2934107081271687 0.0 3 0.0 0.0 0.0 0.47684738772091584 0.0 4 0.0 0.0 0.0 0.5978188191076795 0.0 5 0.0 0.0 0.0 1.3114182954553453 0.0 6 0.0 0.0 0.0 1.5069081285763555 0.0 7 0.0 0.0 0.0 2.073230385912063 0.0 8 0.0 0.0 0.0 2.7248924893897057 0.0 9 0.0 0.0 0.0 3.1970769783008044 0.0 10 0.0 0.0 0.0 3.5606951062437093 0.0 11 0.0 0.0 0.0 3.9604726947684035 0.0 12 0.0 0.0 0.0 4.2774618346131374 0.0 13 0.0 0.0 0.0 4.431249516114274 0.0 14 0.0 0.0 0.0 4.551605092941251 0.0 15 0.0 0.0 0.0 4.970914068933481 0.0 16 0.0 0.0 0.0 5.467292844121932 0.0 17 0.0 0.0 0.0 6.017514903680347 0.0 18 0.0 0.0 0.0 6.3382871501066305 0.0 19 0.0 0.0 0.0 6.6736639475221535 0.0 20 0.0 0.0 0.0 7.08065583231864 0.0 21 0.0 0.0 0.0 7.495829784838013 0.0 22 0.0 0.0 0.0 7.905373067096474 0.0 23 8.797922282673724E-5 0.0 0.0 8.245676700990295 0.0 24 0.0020235221250149565 0.0 0.0 8.563281695394815 0.0 25 0.0020235221250149565 0.0 0.0 8.868745557049246 0.0 26 0.0020235221250149565 0.0 0.0 9.227700786182336 0.0 27 0.0020235221250149565 0.0 0.0 9.560702144581535 0.0 28 0.0020235221250149565 0.0 0.0 9.894847232877483 0.0 29 0.0020235221250149565 0.0 0.0 10.285562961451024 0.0 30 0.0020235221250149565 0.0 0.0 10.660970305252711 0.0 31 0.0020235221250149565 0.0 0.0 11.012183362777046 0.0 32 0.0020235221250149565 0.0 0.0 11.3618127942905 0.0 33 0.0020235221250149565 0.0 0.0 11.724287192336657 0.0 34 0.0020235221250149565 0.0 0.0 12.155649321856151 0.0 35 0.0020235221250149565 0.0 0.0 12.511701236635956 0.0 36 0.0020235221250149565 0.0 0.0 12.86511377473096 0.0 37 0.0020235221250149565 0.0 0.0 13.257501108538207 0.0 38 0.0020235221250149565 0.0 0.0 13.656486884057461 0.0 39 0.0020235221250149565 0.0 0.0 14.058463953152824 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCAG 95 0.0 45.000004 34 GTACCGG 20 7.0332544E-4 45.0 1 CGACGTG 20 7.0332544E-4 45.0 24 CGAGTAC 20 7.0332544E-4 45.0 16 TAGCGTA 20 7.0332544E-4 45.0 38 CCTACGG 20 7.0332544E-4 45.0 11 TTCGTGG 70 0.0 45.0 1 TCGATCT 20 7.0332544E-4 45.0 10 GCGCAGA 20 7.0332544E-4 45.0 1 CCGTCGC 40 6.8157533E-9 45.0 29 CGTTAGG 20 7.0332544E-4 45.0 38 ACCTATC 50 2.1827873E-11 45.0 20 CTAACGG 55 1.8189894E-12 45.0 1 CGCTAGC 35 1.2119199E-7 45.0 36 ACAATCG 20 7.0332544E-4 45.0 9 CGTGTAT 20 7.0332544E-4 45.0 21 ACGTAGG 70 0.0 45.0 1 CCGCGAA 25 3.890779E-5 45.0 18 CGACTTT 20 7.0332544E-4 45.0 15 GACGATT 35 1.2119199E-7 45.0 8 >>END_MODULE