##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043392_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3264783 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53961748759412 31.0 31.0 33.0 30.0 34.0 2 30.582898771526317 31.0 31.0 34.0 26.0 34.0 3 31.547438221774616 31.0 31.0 34.0 28.0 34.0 4 35.155341717964106 37.0 35.0 37.0 32.0 37.0 5 35.475465291261315 37.0 35.0 37.0 33.0 37.0 6 35.79676107110335 37.0 35.0 37.0 35.0 37.0 7 33.75177645803718 37.0 35.0 37.0 32.0 37.0 8 34.77755703824726 37.0 35.0 37.0 32.0 37.0 9 36.72626542100961 39.0 37.0 39.0 32.0 39.0 10 36.80696879394434 39.0 35.0 39.0 32.0 39.0 11 36.67503475728709 39.0 35.0 39.0 33.0 39.0 12 36.66127733451197 39.0 35.0 39.0 33.0 39.0 13 36.68317159210888 39.0 35.0 39.0 33.0 39.0 14 37.951796489996426 40.0 36.0 41.0 33.0 41.0 15 38.02614538240367 40.0 36.0 41.0 33.0 41.0 16 37.88772668811373 40.0 36.0 41.0 33.0 41.0 17 37.84575422011203 40.0 36.0 41.0 33.0 41.0 18 37.654243482644944 39.0 36.0 41.0 33.0 41.0 19 37.43704650508165 39.0 36.0 41.0 33.0 41.0 20 37.18651316182423 39.0 35.0 41.0 33.0 41.0 21 37.079563327792386 39.0 35.0 41.0 32.0 41.0 22 37.004547928606584 38.0 35.0 41.0 32.0 41.0 23 36.93454266332556 38.0 35.0 40.0 32.0 41.0 24 36.79338871833136 38.0 35.0 40.0 32.0 41.0 25 36.721786409694 38.0 35.0 40.0 32.0 41.0 26 36.46044193442566 38.0 35.0 40.0 31.0 41.0 27 36.35117525422057 38.0 35.0 40.0 31.0 41.0 28 36.183118755519125 38.0 35.0 40.0 31.0 41.0 29 36.106664363297654 38.0 35.0 40.0 30.0 41.0 30 35.91396518543499 38.0 35.0 40.0 30.0 41.0 31 35.64392886142816 38.0 35.0 40.0 29.0 41.0 32 35.50975669745891 38.0 35.0 40.0 27.0 41.0 33 35.23444192156109 38.0 35.0 40.0 25.0 41.0 34 35.04131484389621 38.0 34.0 40.0 24.0 41.0 35 34.874233907735984 38.0 34.0 40.0 23.0 41.0 36 34.74134574947248 38.0 34.0 40.0 23.0 41.0 37 34.61836636615665 38.0 34.0 40.0 22.0 41.0 38 34.49466534222948 37.0 34.0 40.0 22.0 41.0 39 34.383824591098396 37.0 34.0 40.0 21.0 41.0 40 34.27710876955681 37.0 34.0 40.0 21.0 41.0 41 34.18430811481192 37.0 34.0 40.0 21.0 41.0 42 34.08297059865847 37.0 33.0 40.0 20.0 41.0 43 33.91880440445812 37.0 33.0 40.0 20.0 41.0 44 33.701688289849585 36.0 33.0 40.0 18.0 41.0 45 33.496734392454265 36.0 33.0 40.0 18.0 41.0 46 33.49639807607428 36.0 33.0 40.0 19.0 41.0 47 33.45400383425177 36.0 33.0 40.0 19.0 41.0 48 33.372423527076684 35.0 33.0 40.0 18.0 41.0 49 33.319208964271134 35.0 33.0 40.0 18.0 41.0 50 33.243876239247754 35.0 33.0 40.0 18.0 41.0 51 32.819221369383506 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 7.0 11 8.0 12 15.0 13 27.0 14 90.0 15 156.0 16 368.0 17 909.0 18 1832.0 19 3393.0 20 5716.0 21 9017.0 22 13939.0 23 22187.0 24 34629.0 25 53120.0 26 69458.0 27 78752.0 28 81337.0 29 81814.0 30 87014.0 31 99287.0 32 118396.0 33 153109.0 34 263142.0 35 297598.0 36 307923.0 37 339328.0 38 466483.0 39 675393.0 40 330.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.880811680286254 17.599270763171702 24.261551227141283 30.25836632940076 2 32.69133048046379 20.06212970356682 27.60958385289313 19.63695596307626 3 24.88447164788594 20.956002282540677 35.547079239263375 18.61244683031001 4 22.059475315817316 24.25012627179203 32.68005867465005 21.010339737740612 5 19.82796406376779 33.21127315352965 31.02350140882258 15.937261373879979 6 80.44991045346659 2.006657104009669 16.224631162316147 1.3188012802075972 7 76.43390081362223 7.1613029104844035 15.041734779922585 1.363061495970789 8 76.08671081661477 3.254060070761211 17.7754539888256 2.883775123798427 9 35.500919969259826 20.28269566461232 25.28171091309897 18.934673453028882 10 28.99175841089592 23.467501515414654 30.77659372766888 16.764146346020546 11 27.447429124692206 19.05753001041723 36.170122179636444 17.32491868525412 12 23.316924892098495 19.99388627054233 36.60699654464018 20.082192292718997 13 19.928368899249964 24.081937451891903 36.47112227673325 19.518571372124885 14 18.907167796450793 22.45748032870791 38.73228327885804 19.903068595983257 15 22.137765358371446 18.640810124286975 39.77250555396791 19.448918963373675 16 21.80056071107942 19.55315253724367 36.505703441852035 22.14058330982488 17 20.79023322530165 22.778267345792965 36.98885959648773 19.44263983241765 18 23.31147276863424 25.428703837284132 33.82123712356993 17.4385862705117 19 23.427590746460027 23.104322706899662 33.68266742383797 19.78541912280234 20 23.61035940214097 24.504231981114824 35.6493218691717 16.236086747572504 21 20.275803935514244 21.57984160049841 36.0425486165543 22.101805847433045 22 20.399885689186693 24.17339835450013 35.81196667588627 19.614749280426906 23 21.45422835147083 23.514885981702307 37.74949207956547 17.28139358726139 24 24.220721560973576 21.420474193843816 35.313587457420596 19.045216787762005 25 19.33819184919794 23.408140755449903 35.127541401679686 22.126125993672474 26 17.909796761377404 22.564868783009466 38.27448868730326 21.25084576830987 27 19.786154240572802 22.998802676931362 38.06954397888006 19.14549910361577 28 20.146668247169874 25.048433540605913 35.60781834504774 19.19707986717647 29 20.76373835565794 22.094975378149176 38.889751631272276 18.251534634920606 30 24.439939806106562 22.44758686871379 35.38728301390935 17.725190311270307 31 23.485971349397495 23.851692440202 33.90274330636983 18.75959290403068 32 23.848139370978103 21.948380642756348 33.1099187909273 21.09356119533825 33 20.431097564524197 23.643623481254345 34.9226885829778 21.002590371243663 34 20.309159904348924 23.720841477059885 34.31048862971903 21.659509988872156 35 23.168339212744 26.055024177717172 31.7682982299283 19.008338379610528 36 20.7177016052828 25.966748785447606 31.918874853244457 21.39667475602513 37 22.33854439942869 28.038034993443667 30.7731631780734 18.850257429054242 38 20.770844494105734 26.014776479784413 30.297266311421005 22.917112714688848 39 21.36233863016317 23.660745599324674 34.63580887305527 20.34110689745689 40 19.642040527655283 23.9512396382853 34.79937257698291 21.607347257076505 41 19.629482265743235 28.423543004236425 30.08153987569771 21.86543485432263 42 19.03762057080057 23.804154824378834 31.966810657859956 25.19141394696064 43 20.540048144087983 23.506370867527796 34.53375002258955 21.419830965794663 44 22.10652285312684 25.30900216032735 32.16964190269307 20.41483308385274 45 23.399135562761753 24.735120220853883 32.30343333691703 19.562310879467333 46 21.578095695793564 26.300737292493864 31.047484626083875 21.073682385628693 47 19.246179608261865 27.962042193922233 32.61337736688779 20.17840083092812 48 21.0318419325266 26.387328039872788 32.34986827608451 20.230961751516105 49 20.30125738831647 23.548640139329322 34.40703409690629 21.743068375447923 50 18.712637256442466 24.964017516631273 35.83080406875434 20.49254115817192 51 18.321340193207327 22.711800447380423 34.69648671902543 24.27037264038682 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1304.0 1 13718.0 2 26132.0 3 104186.5 4 182241.0 5 112089.0 6 41937.0 7 38375.0 8 34813.0 9 35294.0 10 35775.0 11 36128.0 12 36481.0 13 35478.5 14 34476.0 15 31974.5 16 29473.0 17 27202.5 18 24932.0 19 23516.0 20 22100.0 21 21721.0 22 21342.0 23 19984.5 24 18627.0 25 19876.5 26 22702.5 27 24279.0 28 27722.0 29 31165.0 30 34907.0 31 38649.0 32 44494.5 33 50340.0 34 57822.0 35 65304.0 36 72537.0 37 79770.0 38 84896.0 39 90022.0 40 98731.0 41 107440.0 42 122304.5 43 137169.0 44 148917.5 45 160666.0 46 179971.0 47 199276.0 48 224526.0 49 249776.0 50 245148.0 51 240520.0 52 216499.5 53 192479.0 54 182516.0 55 172553.0 56 172779.5 57 173006.0 58 167327.0 59 161648.0 60 152171.5 61 142695.0 62 133270.0 63 123845.0 64 109469.5 65 95094.0 66 78138.5 67 61183.0 68 48847.5 69 36512.0 70 32656.5 71 28801.0 72 30838.0 73 32875.0 74 27248.5 75 15343.5 76 9065.0 77 6708.0 78 4351.0 79 3316.0 80 2281.0 81 1575.0 82 869.0 83 671.5 84 474.0 85 304.5 86 135.0 87 115.0 88 95.0 89 67.0 90 39.0 91 28.0 92 17.0 93 11.5 94 6.0 95 4.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3264783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.128392663047094 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88969814029744 21.130223155561982 2 8.846277509133985 4.799705797481379 3 2.976475507252776 2.422409889380868 4 1.5520791038160437 1.6842164548972753 5 0.9583596906178086 1.2999378999758124 6 0.6705132449599139 1.0913967957027857 7 0.5271860213047661 1.0011196574697645 8 0.42128044749647225 0.9142929120758796 9 0.35519903173566414 0.8672380925813303 >10 4.5859938793171215 29.373011775794765 >50 1.0065983072242244 18.691992198856088 >100 0.20167569420953255 7.973048371729067 >500 0.005414639146456063 1.0134135832719697 >1k 0.0021658556585824186 0.9492061324475146 >5k 6.016265718284496E-4 0.955799881845857 >10k+ 4.813012574627596E-4 5.832987400927685 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 121712 3.728027253266144 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 32893 1.0075095343243334 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12405 0.37996399760719163 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 11684 0.35787983458624967 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 8364 0.2561885430057679 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5450 0.1669329937089234 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5353 0.16396189271997558 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5104 0.15633504585143945 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 5010 0.1534558345837993 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04242242133703833 0.0 2 0.0 0.0 0.0 0.135384189393292 0.0 3 0.0 0.0 0.0 0.22326139287052157 0.0 4 0.0 0.0 0.0 0.28121317710855515 0.0 5 0.0 0.0 0.0 0.6154773533187351 0.0 6 0.0 0.0 0.0 0.7419176098380811 0.0 7 0.0 0.0 0.0 1.074466511250518 0.0 8 0.0 0.0 0.0 1.3954373077781892 0.0 9 0.0 0.0 0.0 1.726761012906524 0.0 10 0.0 0.0 0.0 1.9347380821328708 0.0 11 3.0629907102554747E-5 0.0 0.0 2.1252254744036585 0.0 12 3.0629907102554747E-5 0.0 0.0 2.2974880719484267 0.0 13 3.0629907102554747E-5 0.0 0.0 2.379269923912248 0.0 14 3.0629907102554747E-5 0.0 0.0 2.443776508270228 0.0 15 3.0629907102554747E-5 0.0 0.0 2.6326405154645807 0.0 16 3.0629907102554747E-5 0.0 0.0 2.8366050668604927 0.0 17 3.0629907102554747E-5 0.0 0.0 3.1091193503519223 0.0 18 3.0629907102554747E-5 0.0 0.0 3.2528042445700067 0.0 19 3.0629907102554747E-5 0.0 0.0 3.425097472021877 0.0 20 6.125981420510949E-5 0.0 0.0 3.629613361745635 0.0 21 6.125981420510949E-5 0.0 0.0 3.8359670458955466 0.0 22 6.125981420510949E-5 0.0 0.0 4.059871666815222 0.0 23 6.125981420510949E-5 0.0 0.0 4.250757247878343 0.0 24 9.188972130766425E-5 0.0 0.0 4.425500867898418 0.0 25 9.188972130766425E-5 0.0 0.0 4.5967526785088015 0.0 26 9.188972130766425E-5 0.0 0.0 4.7812059790803865 0.0 27 9.188972130766425E-5 0.0 0.0 4.983485885585657 0.0 28 9.188972130766425E-5 0.0 0.0 5.186225240697468 0.0 29 9.188972130766425E-5 0.0 0.0 5.390955539770943 0.0 30 9.188972130766425E-5 0.0 0.0 5.598013711784214 0.0 31 9.188972130766425E-5 0.0 0.0 5.7974144070218445 0.0 32 9.188972130766425E-5 0.0 0.0 6.027873828061467 0.0 33 9.188972130766425E-5 0.0 0.0 6.260936791204806 0.0 34 9.188972130766425E-5 0.0 0.0 6.5281827306745965 0.0 35 9.188972130766425E-5 0.0 0.0 6.75591608998209 0.0 36 9.188972130766425E-5 0.0 0.0 7.006989438501732 0.0 37 9.188972130766425E-5 0.0 0.0 7.291388125948953 0.0 38 9.188972130766425E-5 0.0 0.0 7.592939561373604 0.0 39 9.188972130766425E-5 0.0 0.0 7.929286571266758 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 37200 0.0 44.141125 1 CGTTTTA 1960 0.0 42.589287 1 CGCACTT 10040 0.0 41.436756 34 CCCGCAC 10150 0.0 41.253696 32 ACCCGCA 10055 0.0 41.2183 31 CCGCACT 10130 0.0 41.09082 33 GCACTTA 10170 0.0 40.88496 35 CTTACTG 10100 0.0 40.633667 38 TAGGGCG 1125 0.0 40.6 4 ACTACGG 240 0.0 40.312496 1 CTAGCGG 875 0.0 40.114285 1 CAACGCA 10760 0.0 40.044147 16 TCAACGC 10795 0.0 39.97684 15 CGCAAGC 10780 0.0 39.907238 19 ATCAACG 10810 0.0 39.900555 14 AACGCAA 10780 0.0 39.865494 17 ACGCAAG 10790 0.0 39.8494 18 TGACCCG 10420 0.0 39.731285 29 CACTTAC 10475 0.0 39.694508 36 GCTTATG 10775 0.0 39.61253 24 >>END_MODULE