##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043387_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 23589 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33163762770783 33.0 31.0 34.0 31.0 34.0 2 32.63991691042435 34.0 31.0 34.0 31.0 34.0 3 32.75204544491076 34.0 31.0 34.0 31.0 34.0 4 36.21895798889313 37.0 37.0 37.0 35.0 37.0 5 36.23239645597524 37.0 37.0 37.0 35.0 37.0 6 36.333333333333336 37.0 37.0 37.0 35.0 37.0 7 36.267794310907625 37.0 37.0 37.0 35.0 37.0 8 36.204841239560814 37.0 37.0 37.0 35.0 37.0 9 37.80473949722328 39.0 38.0 39.0 35.0 39.0 10 37.58103353257874 39.0 37.0 39.0 35.0 39.0 11 37.24163805163423 39.0 37.0 39.0 35.0 39.0 12 37.25732332867014 39.0 37.0 39.0 35.0 39.0 13 37.2379922845394 39.0 37.0 39.0 35.0 39.0 14 38.56475475857391 40.0 37.0 41.0 35.0 41.0 15 38.61473568188563 40.0 37.0 41.0 35.0 41.0 16 38.483615244393576 40.0 37.0 41.0 34.0 41.0 17 38.426809105939206 40.0 37.0 41.0 34.0 41.0 18 38.28767645936665 40.0 37.0 41.0 34.0 41.0 19 38.12866166433507 40.0 37.0 41.0 34.0 41.0 20 37.93285005723006 40.0 35.0 41.0 34.0 41.0 21 37.838696002373986 40.0 35.0 41.0 34.0 41.0 22 37.7826529314511 40.0 35.0 41.0 34.0 41.0 23 37.7626859977108 40.0 35.0 41.0 34.0 41.0 24 37.63071770740599 39.0 35.0 41.0 34.0 41.0 25 37.592606723472805 39.0 35.0 41.0 34.0 41.0 26 37.55703929797787 39.0 35.0 41.0 34.0 41.0 27 37.501759294586456 39.0 35.0 41.0 34.0 41.0 28 37.42396879901649 39.0 35.0 41.0 34.0 41.0 29 37.36199075840434 39.0 35.0 41.0 33.0 41.0 30 37.248505659417525 39.0 35.0 41.0 33.0 41.0 31 37.13154436389843 39.0 35.0 41.0 33.0 41.0 32 36.918309381491376 39.0 35.0 41.0 33.0 41.0 33 36.53758107592522 39.0 35.0 41.0 31.0 41.0 34 36.23048878714655 39.0 35.0 41.0 31.0 41.0 35 36.09254313451185 39.0 35.0 41.0 30.0 41.0 36 35.996015091780066 39.0 35.0 41.0 30.0 41.0 37 35.930857603120096 38.0 35.0 41.0 30.0 41.0 38 35.77985501716902 38.0 35.0 41.0 30.0 41.0 39 35.70643096358472 38.0 35.0 41.0 29.0 41.0 40 35.58285641612616 38.0 35.0 40.0 29.0 41.0 41 35.51384119716817 38.0 35.0 40.0 29.0 41.0 42 35.396455975242695 37.0 35.0 40.0 29.0 41.0 43 35.27648480223833 37.0 35.0 40.0 29.0 41.0 44 35.105260926703124 37.0 35.0 40.0 27.0 41.0 45 35.04807325448302 36.0 35.0 40.0 27.0 41.0 46 34.91517232608419 36.0 35.0 40.0 27.0 41.0 47 34.73457967696808 36.0 35.0 40.0 26.0 41.0 48 34.67378863029378 36.0 35.0 40.0 26.0 41.0 49 34.61236169400992 35.0 34.0 40.0 26.0 41.0 50 34.5214294798423 35.0 34.0 40.0 26.0 41.0 51 34.14260884310484 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 5.0 19 14.0 20 17.0 21 28.0 22 46.0 23 65.0 24 109.0 25 168.0 26 314.0 27 403.0 28 437.0 29 442.0 30 392.0 31 486.0 32 513.0 33 716.0 34 1671.0 35 2513.0 36 1891.0 37 2361.0 38 3804.0 39 7189.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.780363728856674 17.35130781296367 22.281571919114842 31.58675653906482 2 34.89338250879647 19.356479715121456 23.892492263343083 21.857645512738987 3 28.076645894272755 20.865657721819492 30.734664462249356 20.323031921658398 4 22.964093433379965 23.49824070541354 29.76811225571241 23.76955360549409 5 21.832209928356438 32.209928356437324 27.190639704947223 18.76722201025902 6 81.10560006782822 2.0306074865403367 14.472847513671628 2.3909449319598117 7 80.1475263894188 1.8567976599262368 14.040442579168255 3.9552333714867096 8 72.57620077154606 2.942049260248421 17.50392131925898 6.977828648946543 9 43.49908855822629 15.452117512399846 22.900504472423588 18.148289456950273 10 29.975836194836575 16.45258383144686 31.32816143117555 22.243418542541015 11 28.004578405188855 11.963203187926576 38.10674466912544 21.925473737759123 12 23.048878714655135 13.608037644664886 40.40442579168256 22.938657848997416 13 17.66925261774556 18.88592140404426 40.82411293399466 22.620713044215524 14 18.580694391453644 17.41065750985629 41.866971893679256 22.14167620501081 15 23.087032091228963 14.761117470007207 39.32341345542414 22.828436983339692 16 21.429479842299376 18.18220356946034 35.753953113739456 24.634363474500827 17 22.39603204883632 21.175123998473865 34.30412480393404 22.124719148755776 18 22.612234516088005 26.56746788757472 30.569333163762767 20.250964432574506 19 24.532621136970622 22.637670100470558 29.619738013480863 23.20997074907796 20 24.986222391792783 25.600915681037772 31.641866971893677 17.770994955275764 21 20.632498198312774 18.96646742125567 32.77375047691721 27.62728390351435 22 22.824197719275936 21.73894611895375 32.02764000169571 23.40921616007461 23 26.224087498410277 19.526050277671796 32.01068294544067 22.239179278477256 24 26.46996481410827 19.420068676077832 28.746449616346602 25.363516893467292 25 20.250964432574506 19.148755775997287 32.97299588791386 27.62728390351435 26 20.8953325702658 17.571749544279115 32.78646826910848 28.746449616346602 27 22.94289711306117 20.577387765483913 31.794480478188987 24.68523464326593 28 24.56653524948069 22.62919157234304 27.17368264869219 25.63059052948408 29 23.773792869557845 18.88592140404426 32.15481792360846 25.185467802789436 30 27.54249862223918 20.250964432574506 27.805332994192206 24.40120395099411 31 28.60655390224257 21.145449150027556 26.135062953071348 24.11293399465853 32 26.597142736021027 21.10729577345373 25.087964729322987 27.207596761202257 33 22.120479884692017 22.794522870829624 29.640934333799652 25.444062910678706 34 22.56984187545042 24.16380516342363 28.653185806943917 24.613167154182033 35 24.257068972826318 28.835474161685532 24.659799058883376 22.247657806604774 36 23.922167111789395 26.07571325617873 25.664504641994153 24.33761499003773 37 25.193946330916955 28.32252320997075 25.045572088685404 21.437958370426895 38 25.72385433888677 22.17135105345712 24.617406418245793 27.487388189410318 39 26.1096273686888 19.492136165161728 30.51846199499767 23.87977447115181 40 20.323031921658398 21.204798846920177 31.0059773623299 27.466191869091528 41 21.149688414091315 24.528381872906863 27.025308406460642 27.296621306541187 42 21.616007461104754 18.262749586671752 28.50905082877612 31.612192123447368 43 23.70596464453771 19.424307940141592 29.590063165034554 27.27966425028615 44 24.16380516342363 20.161939887235576 30.145406757386915 25.52884819195388 45 26.580185679765993 21.0182712281148 28.66590359913519 23.735639492984017 46 23.544872610114883 19.9754122684302 30.45487303404129 26.024842087413624 47 22.472338801983977 21.662639365806097 30.929670609182246 24.935351223027684 48 23.49400144134978 20.38662088261478 29.200050871168763 26.919326804866678 49 21.671117893933616 17.478485734876426 34.151511297638734 26.69888507355123 50 20.89957183432956 18.788418330577812 34.24477510704142 26.067234728051208 51 20.00508711687651 16.660307770571027 34.19814320234008 29.136461910212386 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2.0 1 31.5 2 61.0 3 542.0 4 1023.0 5 610.5 6 198.0 7 183.0 8 168.0 9 154.0 10 140.0 11 140.0 12 140.0 13 128.5 14 117.0 15 119.5 16 122.0 17 101.0 18 80.0 19 74.5 20 69.0 21 63.5 22 58.0 23 57.0 24 56.0 25 54.0 26 63.5 27 75.0 28 75.0 29 75.0 30 95.0 31 115.0 32 125.5 33 136.0 34 165.0 35 194.0 36 208.5 37 223.0 38 270.5 39 318.0 40 347.0 41 376.0 42 453.0 43 530.0 44 644.5 45 759.0 46 953.5 47 1148.0 48 1524.5 49 1901.0 50 2266.0 51 2631.0 52 2110.0 53 1589.0 54 1486.5 55 1384.0 56 1387.5 57 1391.0 58 1434.5 59 1478.0 60 1502.5 61 1527.0 62 1483.5 63 1440.0 64 1384.0 65 1328.0 66 1093.0 67 858.0 68 698.0 69 538.0 70 473.0 71 408.0 72 378.0 73 348.0 74 302.0 75 195.5 76 135.0 77 107.0 78 79.0 79 58.5 80 38.0 81 26.5 82 15.0 83 11.0 84 7.0 85 5.0 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 23589.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.30861842384162 #Duplication Level Percentage of deduplicated Percentage of total 1 90.58804898648648 72.75001059816016 2 7.258234797297297 11.657976175335962 3 1.1665962837837838 2.8106320742719064 4 0.390625 1.2548221628725253 5 0.1900337837837838 0.7630675314765357 6 0.04222972972972973 0.20348467506040951 7 0.07390202702702703 0.41544787824833607 8 0.0316722972972973 0.20348467506040951 9 0.0316722972972973 0.22892025944296068 >10 0.17947635135135137 2.543558438255119 >50 0.026393581081081082 1.3141718597651448 >100 0.01583614864864865 2.874221035228284 >500 0.005278716216216216 2.9802026368222476 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 703 2.9802026368222476 No Hit CGGCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCT 293 1.2421043706812498 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 253 1.0725338081309086 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 132 0.5595828564161262 No Hit CGGTCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 83 0.3518589172919581 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 60 0.2543558438255119 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 58 0.2458773156979948 No Hit CCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 57 0.2416380516342363 Illumina Single End Adapter 1 (95% over 21bp) GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 52 0.22044173131544365 No Hit CTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGCT 50 0.21196320318792658 Illumina Single End Adapter 1 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTG 50 0.21196320318792658 No Hit GATCCTATTGTCATCATGGGCCGCCGCCCCGCCCGGTGTTACCGGTATTGT 37 0.15685277035906567 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 37 0.15685277035906567 No Hit GCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 27 0.11446012972148034 Illumina Single End Adapter 1 (95% over 21bp) GGGCCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 26 0.11022086565772182 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTC 26 0.11022086565772182 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22468099537920216 0.0 2 0.0 0.0 0.0 0.6613251939463309 0.0 3 0.0 0.0 0.0 1.2463436347450083 0.0 4 0.0 0.0 0.0 2.8826995633558012 0.0 5 0.0 0.0 0.0 4.883632201449828 0.0 6 0.0 0.0 0.0 5.625503412607571 0.0 7 0.0 0.0 0.0 7.787528085124422 0.0 8 0.0 0.0 0.0 9.864767476366103 0.0 9 0.0 0.0 0.0 12.370172538047395 0.0 10 0.0 0.0 0.0 13.45542413836958 0.0 11 0.0 0.0 0.0 14.324473271440079 0.0 12 0.0 0.0 0.0 14.977319937258892 0.0 13 0.0 0.0 0.0 15.371571495188435 0.0 14 0.0 0.0 0.0 15.553859849930053 0.0 15 0.0 0.0 0.0 16.04561448132604 0.0 16 0.0 0.0 0.0 16.494976472084446 0.0 17 0.0 0.0 0.0 17.177497986349568 0.0 18 0.0 0.0 0.0 17.444571622366357 0.0 19 0.0 0.0 0.0 17.821866124040866 0.0 20 0.0 0.0 0.0 18.10165755224893 0.0 21 0.0 0.0 0.0 18.44503794141337 0.0 22 0.0 0.0 0.0 18.775700538386538 0.0 23 0.0 0.0 0.0 19.051252702530842 0.0 24 0.0 0.0 0.0 19.33952265886642 0.0 25 0.0 0.0 0.0 19.551485862054346 0.0 26 0.0 0.0 0.0 19.79736317775234 0.0 27 0.0 0.0 0.0 20.12378651066175 0.0 28 0.0 0.0 0.0 20.488363220144983 0.0 29 0.0 0.0 0.0 20.831743609309424 0.0 30 0.0 0.0 0.0 21.10729577345373 0.0 31 0.0 0.0 0.0 21.365890881343 0.0 32 0.0 0.0 0.0 21.666878629869856 0.0 33 0.0 0.0 0.0 21.85340624867523 0.0 34 0.0 0.0 0.0 22.154393997202085 0.0 35 0.0 0.0 0.0 22.417228369155115 0.0 36 0.0 0.0 0.0 22.66310568485311 0.0 37 0.0 0.0 0.0 23.095510619356478 0.0 38 0.0 0.0 0.0 23.489762177286025 0.0 39 0.0 0.0 0.0 23.867056678960534 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCAACTT 30 2.0760235E-6 45.000004 14 TCGATCA 30 2.0760235E-6 45.000004 16 CAACTTC 30 2.0760235E-6 45.000004 15 CTGGGCC 30 2.0760235E-6 45.000004 9 TCGGCGT 30 2.0760235E-6 45.000004 4 GCAGGGC 30 2.0760235E-6 45.000004 3 CCTCGAT 30 2.0760235E-6 45.000004 14 AGGGCGA 30 2.0760235E-6 45.000004 5 AGGGAAT 30 2.0760235E-6 45.000004 5 AACTTCT 30 2.0760235E-6 45.000004 16 ATCAGAA 30 2.0760235E-6 45.000004 19 GACAAGT 30 2.0760235E-6 45.000004 29 TTCTTAG 30 2.0760235E-6 45.000004 19 GCGTCCC 30 2.0760235E-6 45.000004 7 AAGGACT 30 2.0760235E-6 45.000004 24 CCCCCAA 30 2.0760235E-6 45.000004 11 GGGCGAT 30 2.0760235E-6 45.000004 6 ACAGGGA 30 2.0760235E-6 45.000004 3 CGGTCGG 30 2.0760235E-6 45.000004 1 CCCCAAC 30 2.0760235E-6 45.000004 12 >>END_MODULE