##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043372_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1004825 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1940795660936 33.0 31.0 34.0 30.0 34.0 2 32.5194188042694 34.0 31.0 34.0 31.0 34.0 3 32.56415296195855 34.0 31.0 34.0 31.0 34.0 4 36.10895330032593 37.0 35.0 37.0 35.0 37.0 5 36.00052645983131 37.0 35.0 37.0 35.0 37.0 6 36.26570198790834 37.0 37.0 37.0 35.0 37.0 7 36.18619958699276 37.0 37.0 37.0 35.0 37.0 8 36.16577613017192 37.0 37.0 37.0 35.0 37.0 9 37.70786554872739 39.0 38.0 39.0 35.0 39.0 10 37.56193566043839 39.0 37.0 39.0 35.0 39.0 11 37.249747966063744 39.0 37.0 39.0 34.0 39.0 12 37.22005622869654 39.0 37.0 39.0 34.0 39.0 13 37.22554076580499 39.0 37.0 39.0 34.0 39.0 14 38.62669221008633 40.0 38.0 41.0 34.0 41.0 15 38.74763963874307 40.0 38.0 41.0 35.0 41.0 16 38.76647774488095 40.0 38.0 41.0 35.0 41.0 17 38.73984126589207 40.0 38.0 41.0 35.0 41.0 18 38.44201527629189 40.0 38.0 41.0 35.0 41.0 19 38.14781479362078 40.0 37.0 41.0 34.0 41.0 20 37.82770631702038 40.0 35.0 41.0 34.0 41.0 21 37.747188813972585 40.0 35.0 41.0 34.0 41.0 22 37.69146667330132 39.0 35.0 41.0 34.0 41.0 23 37.686863881770456 39.0 35.0 41.0 34.0 41.0 24 37.59460702112308 39.0 35.0 41.0 34.0 41.0 25 37.472614634389075 39.0 35.0 41.0 33.0 41.0 26 37.44163112979872 39.0 35.0 41.0 33.0 41.0 27 37.48796059015251 39.0 35.0 41.0 34.0 41.0 28 37.44361655014555 39.0 35.0 41.0 33.0 41.0 29 37.440561291767224 39.0 35.0 41.0 33.0 41.0 30 37.38503620033339 39.0 35.0 41.0 33.0 41.0 31 37.24990620257259 40.0 35.0 41.0 33.0 41.0 32 37.08279650685443 40.0 35.0 41.0 33.0 41.0 33 36.92591545791556 40.0 35.0 41.0 33.0 41.0 34 36.7438927176374 40.0 35.0 41.0 32.0 41.0 35 36.623705620381656 40.0 35.0 41.0 31.0 41.0 36 36.556797452292685 40.0 35.0 41.0 31.0 41.0 37 36.52729181698306 39.0 35.0 41.0 31.0 41.0 38 36.4589077700097 39.0 35.0 41.0 31.0 41.0 39 36.43447366456846 39.0 35.0 41.0 31.0 41.0 40 36.38369865399448 39.0 35.0 41.0 31.0 41.0 41 36.3774547806832 39.0 35.0 41.0 31.0 41.0 42 36.28637125867689 39.0 35.0 41.0 31.0 41.0 43 36.150825268081505 39.0 35.0 41.0 31.0 41.0 44 35.99032269300624 39.0 35.0 41.0 30.0 41.0 45 35.89670838205658 38.0 35.0 41.0 30.0 41.0 46 35.85983031871221 38.0 35.0 41.0 30.0 41.0 47 35.754294528898065 38.0 35.0 40.0 29.0 41.0 48 35.70811136267509 38.0 35.0 40.0 29.0 41.0 49 35.642208344736645 38.0 35.0 40.0 29.0 41.0 50 35.48213569527032 38.0 35.0 40.0 28.0 41.0 51 35.389217027840665 38.0 35.0 40.0 28.0 41.0 52 35.089155823153284 37.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 5.0 15 8.0 16 39.0 17 72.0 18 159.0 19 342.0 20 634.0 21 1133.0 22 1782.0 23 2942.0 24 5429.0 25 9417.0 26 13272.0 27 14091.0 28 13067.0 29 13067.0 30 14868.0 31 18404.0 32 23018.0 33 30390.0 34 53631.0 35 101045.0 36 113147.0 37 76246.0 38 124135.0 39 373503.0 40 977.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.698330555071777 19.8446495658448 25.05043166720573 30.40658821187769 2 34.7916303834001 19.094668225810466 26.12444953101286 19.989251859776576 3 21.329982832831586 21.05928893090837 39.13696414798597 18.473764088274077 4 22.077874256711368 23.401985420346826 37.01719204836663 17.502948274575175 5 19.373323713084368 28.23834996143607 32.87477919040629 19.513547135073274 6 69.37407011171099 1.5358893339636255 24.36891996118727 4.721120593138109 7 69.958549996268 1.3328689075212101 20.154653795437017 8.553927300773767 8 56.91389047844152 2.8066578757495084 29.558082253128653 10.721369392680318 9 32.500982758191725 16.270395342472572 32.20292090662553 19.025700992710174 10 25.05491005896549 18.483517030328663 43.92536013733735 12.536212773368497 11 21.69581767969547 15.26365287487871 42.01378349463837 21.02674595078745 12 15.720150274923494 20.33289378747543 44.79207822257607 19.154877715025005 13 11.294404498295723 23.352424551538824 44.92642997536885 20.426740974796605 14 9.620282138680865 23.171796083895206 46.15649491204936 21.051426865374566 15 10.246162267061429 18.295325056601897 50.577165178016074 20.881347498320604 16 10.72316074938422 25.93884507252507 40.0997188565173 23.23827532157341 17 12.743612071753788 22.86298609210559 42.464409225487024 21.928992610653598 18 14.145945811459706 29.21374368671162 40.45808971711492 16.182220784713756 19 14.277212449929092 24.31766725549225 36.789888786604635 24.615231507974027 20 11.899982584032045 30.910656084392805 35.50289851466673 21.686462816908417 21 12.907222650710324 24.65533799417809 37.38501729156818 25.052422063543407 22 10.985793546139876 27.28146692210086 32.66081158410669 29.071927947652576 23 10.6966884780932 24.04577911576643 43.88017814047222 21.377354265668153 24 16.680815067300276 21.314159181947108 39.61505734829448 22.38996840245814 25 12.626377727464982 25.672629562361603 38.35294703057746 23.34804567959595 26 16.001393277436367 21.392282238200682 37.04515711691091 25.561167367452043 27 21.45189460851392 21.911278083248327 37.70477446321499 18.932052845022763 28 14.633095315104619 21.302017764287314 36.02766650909363 28.03722041151444 29 21.32301644564974 21.399447665016297 34.58831139750703 22.689224491826934 30 19.972632050357028 22.12912696240639 30.777697609036398 27.120543378200185 31 20.69723583708606 21.78866966884781 34.37782698479835 23.136267509267782 32 18.33990993456572 21.31495534048217 34.71221356952704 25.632921155425077 33 14.38827656557112 24.756450128131764 35.05137710546612 25.80389620083099 34 13.121389296643693 24.58179284950116 39.827532157340826 22.46928569651432 35 15.326449879332221 23.13338143457816 37.724877466225465 23.815291219864154 36 13.150150523723036 33.88022790038066 34.15530067424676 18.81432090164954 37 12.54387579926853 29.264896872589752 37.511009379742745 20.680217948398973 38 11.684721220112955 29.63262259597442 32.38305177518473 26.299604408727888 39 19.108800039807928 26.94011395019033 33.892966436941755 20.058119573059983 40 13.617396063991242 22.860597616500385 38.9112532032941 24.610753116214266 41 18.207548578110615 24.253676013236138 31.14572189187172 26.393053516781528 42 18.18545517876247 18.193416764113156 39.279476525763194 24.341651531361183 43 21.526235911725923 22.051003906152815 36.770780981763 19.651979200358273 44 14.889259323762843 24.953399845744283 36.93737715522604 23.21996367526684 45 17.93158012589257 21.80250292339462 36.05244694349762 24.213470007215186 46 22.25551712984848 20.04030552583783 34.25312865424328 23.45104869007041 47 15.149603164730177 18.178787351031275 39.69009529022466 26.981514194013883 48 16.809991789615104 16.78332047869032 34.40877764784913 31.997910083845444 49 18.999925360137336 16.6105540765805 40.3258278804767 24.063692682805463 50 16.872092155350433 15.825541761003159 41.086258801283805 26.2161072823626 51 14.421615704227102 15.49633020675242 39.02968178538552 31.05237230363496 52 13.53320229890777 15.085512402657178 48.37618490781977 23.005100390615283 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 514.0 1 1790.5 2 3067.0 3 43574.0 4 84081.0 5 45147.5 6 6214.0 7 6025.0 8 5836.0 9 6301.5 10 6767.0 11 7218.5 12 7670.0 13 7470.0 14 6730.5 15 6191.0 16 5625.0 17 5059.0 18 4567.5 19 4076.0 20 3787.5 21 3499.0 22 3272.0 23 3045.0 24 3042.0 25 3039.0 26 3640.5 27 4242.0 28 4232.5 29 4223.0 30 4689.5 31 5156.0 32 5940.0 33 6724.0 34 8183.0 35 9642.0 36 11218.5 37 12795.0 38 14380.0 39 20363.0 40 24761.0 41 37694.0 42 50627.0 43 73809.0 44 96991.0 45 129051.5 46 161112.0 47 163392.0 48 165672.0 49 142233.0 50 118794.0 51 93235.0 52 67676.0 53 52340.5 54 37005.0 55 30367.0 56 23729.0 57 20289.5 58 16850.0 59 14263.5 60 11677.0 61 9794.0 62 7911.0 63 6552.5 64 4169.0 65 3144.0 66 2703.0 67 2262.0 68 2058.0 69 1854.0 70 1561.0 71 1268.0 72 1341.5 73 1415.0 74 1102.5 75 790.0 76 618.5 77 447.0 78 411.0 79 375.0 80 228.5 81 82.0 82 61.5 83 41.0 84 46.5 85 52.0 86 31.0 87 10.0 88 5.0 89 4.5 90 9.0 91 4.5 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1004825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.42906102293031 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7372892162593 20.67852833771566 2 12.000546138350089 6.823285169512906 3 4.862225447427903 4.146855118565174 4 2.494089234685187 2.8361846019799493 5 1.4332413178988366 2.0372852443565543 6 0.9274625371170839 1.5820133438510002 7 0.6157294634483753 1.2253227342993 8 0.49290120292116896 1.1210174700897333 9 0.38680817674226864 0.989693393469693 >10 3.346516461660383 20.97853479444725 >50 0.44134198717460293 8.547126316530521 >100 0.2421397656245398 12.939854664795128 >500 0.010910367346454418 2.075147384133623 >1k 0.007390894008888476 3.8453261459509838 >5k 0.0010558420012697824 2.3238849153272674 >10k+ 3.519473337565941E-4 7.84994036497529 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 78456 7.807926753414773 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 8894 0.8851292513621776 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCTT 8515 0.847411240763317 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 5817 0.5789067748115343 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 4339 0.43181648545766677 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 3337 0.33209762894036277 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 3132 0.3116960664792377 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 2290 0.2279003806632996 No Hit ACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2252 0.22411862762172519 No Hit GCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2084 0.20739929838529095 No Hit AGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1888 0.18789341427611772 No Hit ACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 1734 0.17256736247605306 No Hit TCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1664 0.16560097529420545 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 1655 0.16470529694225364 No Hit CGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 1562 0.1554499539720847 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 1547 0.15395715671883162 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1527 0.1519667603811609 No Hit TGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1317 0.13106759883561814 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 1298 0.12917672231483093 No Hit TGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCTTG 1290 0.12838056377976265 Illumina Single End Adapter 1 (95% over 22bp) GGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1263 0.12569352872390716 No Hit ATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1129 0.11235787326151321 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGT 1095 0.10897419948747294 No Hit ATGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 1025 0.10200781230562536 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8672156843231409 0.0 2 0.0 0.0 0.0 2.8610952155848035 0.0 3 0.0 0.0 0.0 4.768093946707138 0.0 4 0.0 0.0 0.0 5.9726818102654695 0.0 5 0.0 0.0 0.0 12.006966387181848 0.0 6 0.0 0.0 0.0 13.78528599507377 0.0 7 0.0 0.0 0.0 18.902196899957705 0.0 8 0.0 0.0 0.0 25.168163610578958 0.0 9 0.0 0.0 0.0 29.488716940760828 0.0 10 0.0 0.0 0.0 32.17694623441893 0.0 11 0.0 0.0 0.0 34.5244196750678 0.0 12 0.0 0.0 0.0 36.1614211429851 0.0 13 0.0 0.0 0.0 36.809991789615104 0.0 14 0.0 0.0 0.0 37.27116662105342 0.0 15 0.0 0.0 0.0 38.65041176324235 0.0 16 0.0 0.0 0.0 40.30244072350907 0.0 17 0.0 0.0 0.0 42.119174980718036 0.0 18 0.0 0.0 0.0 43.06162764660513 0.0 19 0.0 0.0 0.0 44.102604931206926 0.0 20 9.951981688353694E-5 0.0 0.0 45.18528101908292 0.0 21 1.9903963376707387E-4 0.0 0.0 46.19490956136641 0.0 22 8.956783519518324E-4 0.0 0.0 47.189610131117355 0.0 23 8.956783519518324E-4 0.0 0.0 47.94188042694002 0.0 24 0.0018908765207872017 0.0 0.0 48.564874480630955 0.0 25 0.0018908765207872017 0.0 0.0 49.16099818376334 0.0 26 0.0018908765207872017 0.0 0.0 49.73980543875799 0.0 27 0.0018908765207872017 0.0 0.0 50.305177518473364 0.0 28 0.0018908765207872017 0.0 0.0 50.860896175951034 0.0 29 0.0018908765207872017 0.0 0.0 51.549075709700695 0.0 30 0.0018908765207872017 0.0 0.0 52.152464359465576 0.0 31 0.0018908765207872017 0.0 0.0 52.65941830667032 0.0 32 0.0018908765207872017 0.0 0.0 53.18508197944916 0.0 33 0.0018908765207872017 0.0 0.0 53.69860423456821 0.0 34 0.0018908765207872017 0.0 0.0 54.30458039957207 0.0 35 0.0018908765207872017 0.0 0.0 54.75659940785709 0.0 36 0.0018908765207872017 0.0 0.0 55.19667603811609 0.0 37 0.0018908765207872017 0.0 0.0 55.6657129350882 0.0 38 0.0018908765207872017 0.0 0.0 56.11922474062648 0.0 39 0.0018908765207872017 0.0 0.0 56.57243798671411 0.0 40 0.0020899161545542755 0.0 0.0 57.032120020899164 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGG 80 0.0 46.000004 1 TCCGCGG 75 0.0 46.000004 1 GCGAATA 20 6.3110725E-4 46.000004 8 TTGTCGC 35 1.01939804E-7 46.000004 37 TCGGGTA 40 5.6097633E-9 46.000004 4 CCCAGTT 20 6.3110725E-4 46.000004 18 CCAGCGG 70 0.0 46.000004 1 TTACTGA 20 6.3110725E-4 46.000004 30 GGTCACT 20 6.3110725E-4 46.000004 8 ACGGGTC 40 5.6097633E-9 46.000004 4 CTAACGG 70 0.0 46.000004 1 GAACGTT 20 6.3110725E-4 46.000004 8 GTCCGCA 20 6.3110725E-4 46.000004 30 AGTTCCG 20 6.3110725E-4 46.000004 23 ATGCGGC 40 5.6097633E-9 46.000004 2 GCTACGA 40 5.6097633E-9 46.000004 10 CCAACGG 35 1.01939804E-7 46.000004 1 AGCTACG 40 5.6097633E-9 46.000004 9 CCACGGC 20 6.3110725E-4 46.000004 2 TGTGTCA 40 5.6097633E-9 46.000004 20 >>END_MODULE