##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043370_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 495841 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23763464497692 33.0 31.0 34.0 30.0 34.0 2 32.55347379502704 34.0 31.0 34.0 31.0 34.0 3 32.621398795178294 34.0 31.0 34.0 31.0 34.0 4 36.12299305624182 37.0 35.0 37.0 35.0 37.0 5 36.009129942864746 37.0 35.0 37.0 35.0 37.0 6 36.274442815337984 37.0 37.0 37.0 35.0 37.0 7 36.19106729778296 37.0 37.0 37.0 35.0 37.0 8 36.17279329462469 37.0 37.0 37.0 35.0 37.0 9 37.76507590134741 39.0 38.0 39.0 35.0 39.0 10 37.58485482241283 39.0 37.0 39.0 35.0 39.0 11 37.13259290780714 39.0 35.0 39.0 34.0 39.0 12 36.99911866908948 39.0 35.0 39.0 33.0 39.0 13 37.0289467793103 39.0 35.0 39.0 33.0 39.0 14 38.421431466942025 40.0 37.0 41.0 34.0 41.0 15 38.54691524097443 40.0 37.0 41.0 35.0 41.0 16 38.55392151919668 40.0 37.0 41.0 35.0 41.0 17 38.56165585338849 40.0 37.0 41.0 35.0 41.0 18 38.312122232731866 40.0 36.0 41.0 35.0 41.0 19 38.05532015303293 40.0 36.0 41.0 34.0 41.0 20 37.723867126760396 39.0 35.0 41.0 34.0 41.0 21 37.67365949971866 39.0 35.0 41.0 34.0 41.0 22 37.64822392662164 39.0 35.0 41.0 34.0 41.0 23 37.63232568504823 39.0 35.0 41.0 34.0 41.0 24 37.53564348248733 39.0 35.0 41.0 34.0 41.0 25 37.44515681438203 39.0 35.0 41.0 34.0 41.0 26 37.37931716013803 39.0 35.0 41.0 34.0 41.0 27 37.39502985836185 39.0 35.0 41.0 34.0 41.0 28 37.37980118626737 39.0 35.0 41.0 33.0 41.0 29 37.2396695714957 39.0 35.0 41.0 33.0 41.0 30 37.09048061777868 39.0 35.0 41.0 33.0 41.0 31 36.988163544362 39.0 35.0 41.0 33.0 41.0 32 36.678324301540215 39.0 35.0 41.0 32.0 41.0 33 36.48546610707868 39.0 35.0 41.0 31.0 41.0 34 36.32120780653476 39.0 35.0 41.0 31.0 41.0 35 36.17810548139424 39.0 35.0 41.0 31.0 41.0 36 36.15209512726862 39.0 35.0 41.0 30.0 41.0 37 36.153633927004826 39.0 35.0 41.0 31.0 41.0 38 36.13361742978092 39.0 35.0 41.0 31.0 41.0 39 36.11312295675428 39.0 35.0 41.0 30.0 41.0 40 36.0640003549525 39.0 35.0 41.0 31.0 41.0 41 36.015303292789426 38.0 35.0 41.0 31.0 41.0 42 35.87001881651578 38.0 35.0 41.0 30.0 41.0 43 35.734959392224525 38.0 35.0 41.0 29.0 41.0 44 35.547689682781375 38.0 35.0 40.0 28.0 41.0 45 35.4571162933279 38.0 35.0 40.0 28.0 41.0 46 35.410357352457744 38.0 35.0 40.0 28.0 41.0 47 35.24653265865469 37.0 35.0 40.0 28.0 41.0 48 35.11106584570457 37.0 35.0 40.0 28.0 41.0 49 34.85583886770154 37.0 35.0 39.0 28.0 41.0 50 34.58426592395546 36.0 35.0 39.0 27.0 40.0 51 34.429839404163836 36.0 35.0 39.0 27.0 40.0 52 34.00730476100202 36.0 34.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 2.0 15 3.0 16 14.0 17 30.0 18 76.0 19 180.0 20 323.0 21 570.0 22 980.0 23 1711.0 24 2964.0 25 5141.0 26 6962.0 27 7530.0 28 7040.0 29 7150.0 30 8011.0 31 9681.0 32 11977.0 33 15825.0 34 29543.0 35 63933.0 36 46747.0 37 37892.0 38 68511.0 39 162901.0 40 143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.24349337791752 20.36600442480553 24.360631734769818 29.029870462507134 2 32.30531561528797 20.407348323353656 26.96933089437945 20.31800516697893 3 21.585145238090437 23.15802848090416 37.34806117283564 17.908765108169757 4 23.58457650738846 24.58187201139075 33.969962145123134 17.86358933609766 5 18.862901615638883 29.99993949673383 30.561813161880526 20.57534572574676 6 71.95814787401606 1.662629754296236 22.006247970619615 4.372974401068085 7 72.34819226324568 1.6360083171823228 17.313816324184568 8.701983095387433 8 58.709949358766224 3.284117287598242 27.366635675549215 10.639297678086322 9 34.73109323351639 18.74492024661131 28.50087023864505 18.023116281227246 10 28.306049721584138 18.091686649550965 42.25850625502933 11.343757373835563 11 25.233290510466055 14.767032173620173 38.89492801119714 21.104749304716634 12 15.653203345427263 24.409236025258096 42.690902930576534 17.246657698738105 13 10.493686484175372 28.80661341034727 41.80513511387723 18.89456499160013 14 8.998247422056666 22.476963381406538 49.736508275838425 18.78828092069837 15 9.123489183024397 17.46023422831109 52.42829858765209 20.987978001012422 16 9.195286392210406 24.394916918931674 38.31207988044555 28.097716808412375 17 12.522562676341812 21.970551043580503 42.58824905564486 22.918637224432832 18 15.77582329819438 29.270068429194033 38.783803679001934 16.170304593609643 19 16.52626547623129 22.639515489844527 34.99871934753278 25.835499686391405 20 10.80749675803332 31.651476985565935 35.506341750682175 22.034684505718566 21 13.187291893974077 23.94396590842629 35.070516556718786 27.798225640880847 22 10.008046934400342 28.23626928793706 31.159787109174108 30.595896668488486 23 10.119372944149434 23.295975927767167 44.863373541114996 21.721277586968405 24 15.856090964643906 21.469382322155692 39.85047626154352 22.824050451656884 25 11.830606988933953 27.514465322552994 37.29360823328446 23.36131945522859 26 16.61399521217487 23.71909543583528 34.76941196875612 24.897497383233738 27 23.691465610951898 22.50277810830488 37.90005263784156 15.905703642901656 28 17.291026760594626 23.137860725514834 32.59613464800208 26.974977865888462 29 23.95747830453714 24.908993003805655 29.19242257094512 21.941106120712085 30 29.201094705762532 24.130921000885365 25.755232019941875 20.912752273410227 31 31.187416934057488 21.569011033778974 26.921331636552846 20.322240395610688 32 26.808190528818717 28.18463983414038 26.26587958639967 18.741290050641236 33 26.021849746188796 25.12035108028582 29.717187566175447 19.140611607349935 34 23.45328441980393 22.373704473813177 35.37787314885215 18.79513795753074 35 24.942874832859726 32.15002389879014 28.013415590884982 14.893685677465154 36 19.529244253702295 29.29910999695467 36.409252159462405 14.762393589880626 37 17.371496104598048 30.709239453776515 37.45091672532122 14.46834771630422 38 14.68091585810774 29.039954340201803 35.630978478988226 20.648151322702237 39 22.654842983940416 23.331269499698493 38.06744500757299 15.9464425087881 40 15.391425880473781 18.477294132594924 42.70965894308861 23.421621043842684 41 23.16347377485928 21.84571263772056 30.97787395556237 24.012939631857794 42 22.82263870877963 17.68006276205477 36.981209702303765 22.51608882686184 43 25.54326891080003 23.171540877015012 33.36109760991931 17.924092602265645 44 16.070070849324683 28.487156164980306 33.67006762248382 21.77270536321119 45 20.623546661127257 24.32836332614689 33.34677850359288 21.701311509132967 46 24.988252282485714 19.68312422732287 34.062532142360155 21.26609134783126 47 17.584064246401567 18.668282776131864 39.16759606406085 24.58005691340571 48 19.03392418134039 14.919097049255708 34.38985481232895 31.65712395707495 49 20.756250491589036 17.699020452120738 39.54352302451794 22.001206031772284 50 18.320792350773736 16.7152373442293 39.253712379573294 25.710257925423676 51 16.73742187515756 14.48448192061568 38.64444448926168 30.133651714965083 52 15.820394037604796 14.475809785798269 47.564642697961645 22.139153478635286 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 255.0 1 852.0 2 1449.0 3 15260.5 4 29072.0 5 15830.0 6 2588.0 7 2637.0 8 2686.0 9 2955.5 10 3225.0 11 3360.0 12 3495.0 13 3505.0 14 3295.0 15 3075.0 16 2783.0 17 2491.0 18 2263.0 19 2035.0 20 1921.0 21 1807.0 22 1671.0 23 1535.0 24 1509.0 25 1483.0 26 1858.0 27 2233.0 28 2091.5 29 1950.0 30 2003.5 31 2057.0 32 2583.0 33 3109.0 34 3760.5 35 4412.0 36 5092.5 37 5773.0 38 6856.5 39 10969.5 40 13999.0 41 20404.0 42 26809.0 43 42173.5 44 57538.0 45 71270.0 46 85002.0 47 85470.5 48 85939.0 49 70780.5 50 55622.0 51 42891.0 52 30160.0 53 23560.5 54 16961.0 55 13796.5 56 10632.0 57 9392.0 58 8152.0 59 7065.5 60 5979.0 61 4851.5 62 3724.0 63 3177.0 64 2163.0 65 1696.0 66 1482.5 67 1269.0 68 1131.0 69 993.0 70 893.5 71 794.0 72 806.0 73 818.0 74 628.5 75 439.0 76 364.0 77 289.0 78 197.5 79 106.0 80 83.0 81 60.0 82 42.0 83 24.0 84 18.5 85 13.0 86 10.5 87 8.0 88 4.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 495841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.87776912859045 #Duplication Level Percentage of deduplicated Percentage of total 1 72.99537136140817 21.079434816304687 2 11.183020038796924 6.4588134168155635 3 4.673637552235451 4.048926786724978 4 2.424750616940348 2.8008555404164257 5 1.4481165436717507 2.0909187609722593 6 0.9897190691954376 1.7148527269433573 7 0.692632427123108 1.4001175525005456 8 0.5225852297786507 1.2072876492447415 9 0.4166867328662202 1.0829684943591613 >10 3.8524655470530265 25.147944902694174 >50 0.5720534595459353 11.074823136419788 >100 0.21285710122639456 10.786487895922187 >500 0.009802629661741854 1.8604295566749154 >1k 0.005601502663852488 3.7257118803708287 >5k 0.0 0.0 >10k+ 7.00187832981561E-4 5.520426883636403 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27302 5.506200576394448 No Hit CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 4490 0.9055322169808467 No Hit CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCTT 4143 0.8355501057798771 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 3089 0.6229819639763553 No Hit TCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 1561 0.3148186616274169 No Hit CGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1544 0.311390143211231 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCG 1297 0.2615757873995898 No Hit ACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1250 0.2520969423666054 No Hit GCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1052 0.21216478669573513 No Hit AGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 950 0.1915936761986201 No Hit ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 886 0.17868631274944993 No Hit TCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 828 0.16698901462363944 No Hit CGGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 794 0.16013197779126775 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 751 0.15145984297385653 No Hit TGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 675 0.13613234887796694 No Hit ATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 620 0.12504008341383627 No Hit ATTGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 567 0.11435117305749222 No Hit AGAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 549 0.1107209770874131 No Hit GGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 529 0.10668742600954742 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCC 519 0.10467065047061457 No Hit ATAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 512 0.10325890759336157 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCT 511 0.10305723003946829 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 510 0.10285555248557503 No Hit GTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 497 0.10023374428496232 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8585413469237114 0.0 2 0.0 0.0 0.0 2.9388453153329395 0.0 3 0.0 0.0 0.0 4.813034823663231 0.0 4 0.0 0.0 0.0 6.016444787744458 0.0 5 0.0 0.0 0.0 12.289625101595067 0.0 6 0.0 0.0 0.0 13.675956607057504 0.0 7 0.0 0.0 0.0 18.935303857486574 0.0 8 0.0 0.0 0.0 25.13709031725896 0.0 9 0.0 0.0 0.0 29.61413033613598 0.0 10 0.0 0.0 0.0 32.06874784457114 0.0 11 0.0 0.0 0.0 34.471937576763516 0.0 12 0.0 0.0 0.0 36.27251477792276 0.0 13 0.0 0.0 0.0 36.93099199138433 0.0 14 0.0 0.0 0.0 37.38940507138377 0.0 15 0.0 0.0 0.0 39.01855635173372 0.0 16 0.0 0.0 0.0 40.82256207130915 0.0 17 0.0 0.0 0.0 43.428437745164274 0.0 18 0.0 0.0 0.0 44.3827759301873 0.0 19 0.0 0.0 0.0 45.50692661558846 0.0 20 0.0 0.0 0.0 46.51712948303992 0.0 21 0.0 0.0 0.0 47.37002385845462 0.0 22 0.0020167755389328434 0.0 0.0 48.31266474535184 0.0 23 0.002218453092826128 0.0 0.0 48.993729844849454 0.0 24 0.004436906185652256 0.0 0.0 49.5178898074181 0.0 25 0.005243616401225393 0.0 0.0 50.02773066366033 0.0 26 0.005243616401225393 0.0 0.0 50.52970609530071 0.0 27 0.005848649062905246 0.0 0.0 51.0226060370159 0.0 28 0.006655359278478383 0.0 0.0 51.52074959513231 0.0 29 0.006655359278478383 0.0 0.0 52.17035299622258 0.0 30 0.006655359278478383 0.0 0.0 52.73464679201599 0.0 31 0.006655359278478383 0.0 0.0 53.1218676954911 0.0 32 0.006655359278478383 0.0 0.0 53.54095365248134 0.0 33 0.006655359278478383 0.0 0.0 53.973350328028545 0.0 34 0.006655359278478383 0.0 0.0 54.58524002654077 0.0 35 0.006655359278478383 0.0 0.0 55.00493101619269 0.0 36 0.006655359278478383 0.0 0.0 55.38710998082046 0.0 37 0.006655359278478383 0.0 0.0 55.76868391278656 0.0 38 0.006655359278478383 0.0 0.0 56.180307800282755 0.0 39 0.006655359278478383 0.0 0.0 56.5812427774226 0.0 40 0.006655359278478383 0.0 0.0 56.988026403625355 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTGGGA 75 0.0 46.000004 3 TATGAGG 55 1.8189894E-12 46.000004 1 TGATCGG 25 3.4143253E-5 46.0 1 GTGTTGT 20 6.307965E-4 46.0 37 GTGCATG 20 6.307965E-4 46.0 32 ACAACAG 25 3.4143253E-5 46.0 19 CGGGTAA 20 6.307965E-4 46.0 5 GTACCGG 25 3.4143253E-5 46.0 1 CAAACGG 20 6.307965E-4 46.0 1 CCCTCCG 20 6.307965E-4 46.0 22 GTCGACT 25 3.4143253E-5 46.0 33 GTACACT 25 3.4143253E-5 46.0 17 TTGTGCA 20 6.307965E-4 46.0 30 CTCCGGG 60 0.0 46.0 2 GCGGTCC 20 6.307965E-4 46.0 10 CTATCAA 20 6.307965E-4 46.0 43 GCGAAGC 30 1.8592473E-6 46.0 16 TCCTGAC 20 6.307965E-4 46.0 14 GCAACTC 20 6.307965E-4 46.0 45 ACCGCGA 20 6.307965E-4 46.0 23 >>END_MODULE