##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043369_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 494776 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.158180671657476 33.0 31.0 34.0 30.0 34.0 2 32.4393139521723 34.0 31.0 34.0 31.0 34.0 3 32.505058854916165 34.0 31.0 34.0 31.0 34.0 4 36.06690300257086 37.0 35.0 37.0 35.0 37.0 5 36.002241418338805 37.0 35.0 37.0 35.0 37.0 6 36.2702313774314 37.0 37.0 37.0 35.0 37.0 7 36.195658237262926 37.0 37.0 37.0 35.0 37.0 8 36.09703583035555 37.0 37.0 37.0 35.0 37.0 9 37.69336629100846 39.0 38.0 39.0 35.0 39.0 10 37.523406551651654 39.0 37.0 39.0 35.0 39.0 11 37.1213943279383 39.0 35.0 39.0 34.0 39.0 12 36.995317072776366 39.0 35.0 39.0 33.0 39.0 13 37.025983475350465 39.0 35.0 39.0 33.0 39.0 14 38.41931096091969 40.0 37.0 41.0 34.0 41.0 15 38.561049848820474 40.0 37.0 41.0 35.0 41.0 16 38.59615664462302 40.0 37.0 41.0 35.0 41.0 17 38.590509644768545 40.0 37.0 41.0 35.0 41.0 18 38.37019378466215 40.0 37.0 41.0 35.0 41.0 19 38.1284682361311 40.0 37.0 41.0 34.0 41.0 20 37.82108065063787 40.0 35.0 41.0 34.0 41.0 21 37.7699565055702 39.0 35.0 41.0 34.0 41.0 22 37.75319942761977 39.0 35.0 41.0 34.0 41.0 23 37.71619682442156 39.0 35.0 41.0 34.0 41.0 24 37.61648907788575 39.0 35.0 41.0 34.0 41.0 25 37.60188448914256 39.0 35.0 41.0 34.0 41.0 26 37.57307953498149 39.0 35.0 41.0 34.0 41.0 27 37.559477420085045 39.0 35.0 41.0 34.0 41.0 28 37.532418710689285 39.0 35.0 41.0 34.0 41.0 29 37.41764151858619 39.0 35.0 41.0 34.0 41.0 30 37.20435712322344 39.0 35.0 41.0 33.0 41.0 31 37.1039379436351 39.0 35.0 41.0 33.0 41.0 32 36.806932834252265 39.0 35.0 41.0 32.0 41.0 33 36.57969262858344 39.0 35.0 41.0 31.0 41.0 34 36.36257215386357 39.0 35.0 41.0 31.0 41.0 35 36.20727561563213 39.0 35.0 41.0 31.0 41.0 36 36.17129771856355 39.0 35.0 41.0 31.0 41.0 37 36.119825941436126 39.0 35.0 41.0 30.0 41.0 38 36.09524714214109 39.0 35.0 41.0 30.0 41.0 39 36.034534819797244 38.0 35.0 41.0 30.0 41.0 40 35.96246584312901 38.0 35.0 41.0 30.0 41.0 41 35.873944977120956 38.0 35.0 41.0 30.0 41.0 42 35.71088937216033 38.0 35.0 40.0 29.0 41.0 43 35.561896696686986 38.0 35.0 40.0 28.0 41.0 44 35.410511019127846 38.0 35.0 40.0 28.0 41.0 45 35.34942074797484 38.0 35.0 40.0 28.0 41.0 46 35.23990250133394 37.0 35.0 40.0 28.0 41.0 47 35.015724287354274 37.0 35.0 40.0 27.0 41.0 48 34.92498221417369 37.0 35.0 40.0 27.0 41.0 49 34.66554764176112 36.0 35.0 39.0 27.0 40.0 50 34.43071814315973 36.0 35.0 39.0 26.0 40.0 51 33.98259414361247 36.0 34.0 39.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 4.0 15 4.0 16 10.0 17 25.0 18 65.0 19 167.0 20 286.0 21 525.0 22 908.0 23 1424.0 24 2366.0 25 4511.0 26 6615.0 27 7784.0 28 7468.0 29 7334.0 30 8348.0 31 9850.0 32 12011.0 33 15970.0 34 30234.0 35 62030.0 36 45212.0 37 38338.0 38 71457.0 39 161819.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.662368425307616 20.475326208223517 24.47026533219073 28.39204003427814 2 32.17233657250958 20.341124064223003 27.058911507429624 20.427627855837795 3 21.664349119601596 23.32954710818633 36.94439503937135 18.06170873284072 4 23.67455171633224 24.814865717011333 33.621072970394685 17.889509596261743 5 19.16321729429075 30.14798615939334 30.092203340501563 20.596593205814347 6 72.4042799165683 1.5906187850663736 21.585121347842257 4.419979950523064 7 72.75777321454558 1.598299028247126 16.88582307953498 8.758104677672321 8 58.917772891166905 3.225095800928097 27.05143337591152 10.805697931993468 9 34.70580626384464 18.8412534156871 28.161632738855563 18.29130758161269 10 28.407602632302293 18.099099390431224 42.15079146927094 11.342506507995537 11 25.400181092049735 14.592462043429755 38.74015716202888 21.26719970249163 12 15.974097369314599 24.1082833443821 42.59361812214012 17.324001164163178 13 10.591863792908306 28.62931912623086 41.59660129028085 19.182215790579978 14 9.003872459456401 22.418831956279206 49.56000291040794 19.017292673856453 15 9.05197503516743 17.440619593513023 52.181391174996364 21.326014196323186 16 9.19688909728847 24.32555338173234 38.337752841689976 28.139804679289217 17 12.712823580771904 21.911127459698935 42.36401927336815 23.01202968616101 18 15.917708215434864 29.266375086908013 38.70701084935405 16.10890584830307 19 16.51939463514803 22.677736996135625 34.67043672288066 26.13243164583569 20 10.860065969246689 31.755986547447733 35.1961291574369 22.187818325868676 21 13.152214335376009 23.905363235080117 34.72884699338691 28.21357543615697 22 10.018675117628987 28.247934418807702 30.892969747926337 30.840420715636974 23 10.131251313725807 23.201408314065354 44.610490403738254 22.05684996847058 24 15.953481979724158 21.457588888709232 39.63975617249017 22.94917295907643 25 11.744506605009136 27.366323346322375 37.33063042669814 23.558539621970347 26 16.63419405953401 23.523170081006352 34.63809885685644 25.2045370026032 27 23.933052532863357 22.306659983507686 37.69342086115737 16.066866622471583 28 17.494785519103594 23.239809529969115 32.11817064691901 27.14723430400828 29 24.169523178165473 24.740488625155628 28.82031464743642 22.269673549242487 30 29.387439972836194 24.050883632189112 25.409680340194353 21.151996054780344 31 31.407950264362057 21.47335359839604 26.49057351205394 20.628122625187963 32 27.14602163403237 27.821276698950637 25.959221950943455 19.073479716073535 33 26.595671576632657 24.748775203324332 29.34439018869145 19.311163031351562 34 24.088072178116963 22.171851504519218 35.0435348521351 18.69654146522871 35 25.20190955098873 32.21619480330493 27.690308341552537 14.8915873041538 36 19.72084337154591 29.51315342700535 35.968599932090484 14.797403269358256 37 17.62454120652578 30.61910844503371 37.29748411402332 14.458866234417192 38 14.837825601888532 28.946432324930875 35.43542936601614 20.780312707164455 39 22.775559040858894 23.30590004365612 38.05115850405032 15.867382411434669 40 15.667898200397756 18.272915420311413 42.81674939770724 23.242436981583587 41 23.528222872572638 21.56531440490242 30.89782042782997 24.008642294694972 42 23.043559105534626 17.50549743722412 36.717423642213845 22.733519815027407 43 25.922437628340905 23.013646579462222 33.10973046388669 17.954185328310185 44 16.199856096496195 28.187907255000244 33.71141688359985 21.900819764903716 45 20.69320258056171 24.202871602502952 33.38824033502029 21.71568548191505 46 25.32034698530244 19.364116286966222 34.095226930974825 21.220309796756514 47 17.8763723381894 18.443093440263876 39.094256794994095 24.586277426552623 48 19.036493281808333 14.704027681213317 34.293296360373176 31.96618267660517 49 20.96524487849047 17.39049590117548 39.408338318754346 22.235920901579707 50 18.619536921758534 16.419551473798244 39.211077336006596 25.74983426843663 51 16.86338868498068 14.396817953983215 38.46387051918444 30.275922841851667 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 181.0 1 805.5 2 1430.0 3 14573.5 4 27717.0 5 15243.0 6 2769.0 7 2716.0 8 2663.0 9 3023.0 10 3383.0 11 3518.5 12 3654.0 13 3504.0 14 3354.0 15 3057.5 16 2761.0 17 2502.0 18 2243.0 19 2015.0 20 1787.0 21 1678.5 22 1570.0 23 1436.0 24 1302.0 25 1335.0 26 1699.0 27 2030.0 28 1961.5 29 1893.0 30 2042.0 31 2191.0 32 2872.0 33 3553.0 34 4026.0 35 4499.0 36 5439.0 37 6379.0 38 8130.0 39 9881.0 40 14514.5 41 19148.0 42 26981.5 43 34815.0 44 49978.5 45 65142.0 46 78679.5 47 92217.0 48 87704.5 49 83192.0 50 63837.0 51 44482.0 52 34343.0 53 24204.0 54 18754.5 55 13305.0 56 11358.5 57 9412.0 58 8229.5 59 7047.0 60 5930.5 61 4814.0 62 3765.0 63 2716.0 64 2426.0 65 2136.0 66 1878.0 67 1620.0 68 1290.5 69 961.0 70 938.5 71 916.0 72 914.0 73 912.0 74 737.0 75 425.0 76 288.0 77 225.5 78 163.0 79 115.5 80 68.0 81 45.0 82 22.0 83 17.0 84 12.0 85 13.0 86 14.0 87 7.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 494776.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.926148397841107 #Duplication Level Percentage of deduplicated Percentage of total 1 72.89378833363524 21.085365386195516 2 11.294770315792949 6.534284045483149 3 4.656243646999884 4.040615841288705 4 2.4302979016390016 2.8119663101508645 5 1.4597155716275674 2.1111974621769236 6 0.9505734050310624 1.6497856426181778 7 0.6857570001061724 1.3885416124950634 8 0.5219867277617818 1.2079252439152628 9 0.3915517039725619 1.0193474425084088 >10 3.937255537452088 25.697368338863523 >50 0.5455523202607602 10.630011402533333 >100 0.21710040985986603 11.065753951735779 >500 0.008403886833285138 1.5659181335820151 >1k 0.006302915124963853 3.929178281883152 >5k 0.0 0.0 >10k+ 7.003239027737614E-4 5.262740904570138 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25979 5.250658884020243 No Hit CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 4432 0.8957588888709234 No Hit CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 3991 0.8066276456416641 No Hit GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 3280 0.6629262534965318 No Hit CGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 1558 0.3148899704108526 No Hit TCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1482 0.2995294840493476 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCC 1265 0.2556712532539978 No Hit ACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 1244 0.25142690833831877 No Hit GCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 1136 0.22959884877196954 No Hit AGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 1008 0.20372855595259268 No Hit ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 847 0.17118857826572026 No Hit CGGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 818 0.16532734004883018 No Hit TCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 792 0.16007243681989425 No Hit TGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 696 0.14066971720536162 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 693 0.14006338221740747 No Hit AGAGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 626 0.12652190081976492 No Hit ATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 605 0.12227755590408589 No Hit ATTGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 565 0.11419308939803062 No Hit TGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCTT 533 0.1077255161931864 Illumina Single End Adapter 2 (95% over 21bp) GGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 525 0.10610862289197535 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 515 0.10408750626546154 No Hit AGACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 515 0.10408750626546154 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 498 0.10065160800038805 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.834114831762252 0.0 2 0.0 0.0 0.0 2.9257684285414007 0.0 3 0.0 0.0 0.0 4.842191213801801 0.0 4 0.0 0.0 0.0 6.071232234384853 0.0 5 0.0 0.0 0.0 12.41511310168642 0.0 6 0.0 0.0 0.0 13.826458841981017 0.0 7 0.0 0.0 0.0 19.152101152844924 0.0 8 0.0 0.0 0.0 25.497801025110352 0.0 9 0.0 0.0 0.0 30.198109851730884 0.0 10 0.0 0.0 0.0 32.724707746535806 0.0 11 0.0 0.0 0.0 35.17834333112358 0.0 12 0.0 0.0 0.0 36.9811793619739 0.0 13 0.0 0.0 0.0 37.64370139214513 0.0 14 0.0 0.0 0.0 38.11886591103853 0.0 15 0.0 0.0 0.0 39.842676281792166 0.0 16 0.0 0.0 0.0 41.72292107943797 0.0 17 0.0 0.0 0.0 44.376647210050606 0.0 18 0.0 0.0 0.0 45.34173039921096 0.0 19 0.0 0.0 0.0 46.498617556227465 0.0 20 0.0 0.0 0.0 47.539088395556774 0.0 21 2.0211166265138165E-4 0.0 0.0 48.441112745969896 0.0 22 0.0020211166265138164 0.0 0.0 49.4288324413472 0.0 23 0.0020211166265138164 0.0 0.0 50.13298947402461 0.0 24 0.004850679903633159 0.0 0.0 50.65666079195434 0.0 25 0.005254903228935922 0.0 0.0 51.18194900318528 0.0 26 0.005254903228935922 0.0 0.0 51.67813313499442 0.0 27 0.005659126554238686 0.0 0.0 52.2007938946109 0.0 28 0.006871796530146975 0.0 0.0 52.68909567157663 0.0 29 0.006871796530146975 0.0 0.0 53.33827833201287 0.0 30 0.006871796530146975 0.0 0.0 53.90883955567772 0.0 31 0.006871796530146975 0.0 0.0 54.308010089414196 0.0 32 0.006871796530146975 0.0 0.0 54.75144307727133 0.0 33 0.006871796530146975 0.0 0.0 55.192046501851344 0.0 34 0.006871796530146975 0.0 0.0 55.797775154817536 0.0 35 0.006871796530146975 0.0 0.0 56.216550519831195 0.0 36 0.006871796530146975 0.0 0.0 56.5969246689411 0.0 37 0.007073908192798357 0.0 0.0 56.98659595453296 0.0 38 0.007073908192798357 0.0 0.0 57.41062622277556 0.0 39 0.007073908192798357 0.0 0.0 57.81990233964461 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTTC 30 2.1629858E-6 45.000004 14 ACAACGA 30 2.1629858E-6 45.000004 33 GTTTGCG 25 3.887573E-5 45.000004 17 CGGGTAC 30 2.1629858E-6 45.000004 5 TCTGATT 30 2.1629858E-6 45.000004 25 CCTTAGG 30 2.1629858E-6 45.000004 1 CTGTCGG 25 3.887573E-5 45.000004 1 AGTCAGG 35 1.2100463E-7 45.000004 1 GTCGACT 25 3.887573E-5 45.000004 33 TCCGATT 30 2.1629858E-6 45.000004 41 CGGCCAT 25 3.887573E-5 45.000004 7 AACCATG 25 3.887573E-5 45.000004 10 CATGACA 25 3.887573E-5 45.000004 43 TGGGTAC 25 3.887573E-5 45.000004 5 GTCTCAC 70 0.0 45.000004 21 ACCTGGT 25 3.887573E-5 45.000004 10 TCGGGCA 25 3.887573E-5 45.000004 4 TATATGG 25 3.887573E-5 45.000004 1 ATGCTGG 30 2.1629858E-6 45.000004 1 TTGTAGC 35 1.2100463E-7 45.000004 1 >>END_MODULE