##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043367_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1066165 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.107447721506524 33.0 31.0 34.0 30.0 34.0 2 32.41743444963959 34.0 31.0 34.0 31.0 34.0 3 32.46086581345289 34.0 31.0 34.0 31.0 34.0 4 36.0698859932562 37.0 35.0 37.0 35.0 37.0 5 36.022821045522974 37.0 35.0 37.0 35.0 37.0 6 36.27430275801588 37.0 37.0 37.0 35.0 37.0 7 36.20305956395117 37.0 37.0 37.0 35.0 37.0 8 36.09691933237351 37.0 37.0 37.0 35.0 37.0 9 37.65452251762157 39.0 38.0 39.0 35.0 39.0 10 37.5051863454531 39.0 37.0 39.0 35.0 39.0 11 37.287204138196245 39.0 37.0 39.0 34.0 39.0 12 37.309113504945294 39.0 37.0 39.0 34.0 39.0 13 37.31347774500195 39.0 37.0 39.0 34.0 39.0 14 38.719724432897344 40.0 38.0 41.0 35.0 41.0 15 38.83432114166194 40.0 38.0 41.0 35.0 41.0 16 38.88555523769773 40.0 38.0 41.0 35.0 41.0 17 38.83887484582593 40.0 38.0 41.0 35.0 41.0 18 38.563978371077646 40.0 38.0 41.0 35.0 41.0 19 38.275070931797615 40.0 37.0 41.0 35.0 41.0 20 37.96352722139631 40.0 35.0 41.0 34.0 41.0 21 37.87379158010252 40.0 35.0 41.0 34.0 41.0 22 37.82903584342011 40.0 35.0 41.0 34.0 41.0 23 37.80297796307326 40.0 35.0 41.0 34.0 41.0 24 37.69462043867507 39.0 35.0 41.0 34.0 41.0 25 37.64921283291048 39.0 35.0 41.0 34.0 41.0 26 37.6286447219708 39.0 35.0 41.0 34.0 41.0 27 37.57809344707433 39.0 35.0 41.0 34.0 41.0 28 37.480048585350296 39.0 35.0 41.0 34.0 41.0 29 37.49654884562896 39.0 35.0 41.0 34.0 41.0 30 37.22760360732157 39.0 35.0 41.0 33.0 41.0 31 37.16200212912636 39.0 35.0 41.0 33.0 41.0 32 36.90283211322825 39.0 35.0 41.0 33.0 41.0 33 36.626874827067105 39.0 35.0 41.0 31.0 41.0 34 36.380655902229016 39.0 35.0 41.0 31.0 41.0 35 36.25994944497334 39.0 35.0 41.0 30.0 41.0 36 36.2159374956034 39.0 35.0 41.0 30.0 41.0 37 36.13777792367973 39.0 35.0 41.0 30.0 41.0 38 36.12732456983675 39.0 35.0 41.0 30.0 41.0 39 36.08250223933444 39.0 35.0 41.0 30.0 41.0 40 36.02118433825909 39.0 35.0 41.0 30.0 41.0 41 35.97076718894355 39.0 35.0 41.0 30.0 41.0 42 35.86855036509358 38.0 35.0 41.0 30.0 41.0 43 35.73170194106916 38.0 35.0 40.0 29.0 41.0 44 35.61574052796706 38.0 35.0 40.0 28.0 41.0 45 35.55219689260105 38.0 35.0 40.0 28.0 41.0 46 35.46782439866249 38.0 35.0 40.0 27.0 41.0 47 35.30745616297665 38.0 35.0 40.0 26.0 41.0 48 35.317251082149575 38.0 35.0 40.0 26.0 41.0 49 35.24614670337143 38.0 35.0 40.0 26.0 41.0 50 35.12662392781605 38.0 35.0 40.0 26.0 41.0 51 34.65918220913273 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 2.0 14 5.0 15 11.0 16 24.0 17 70.0 18 151.0 19 332.0 20 644.0 21 1043.0 22 1712.0 23 2735.0 24 5232.0 25 9600.0 26 14382.0 27 17000.0 28 16646.0 29 16172.0 30 17396.0 31 20538.0 32 25359.0 33 32871.0 34 56463.0 35 99931.0 36 119976.0 37 84495.0 38 147052.0 39 376276.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.52381667002762 19.335562506741454 25.331444945200786 29.809175878030135 2 34.350968189726736 19.407971561625075 26.506591381259 19.734468867389193 3 20.332124952516732 21.322028016301417 39.80912898097386 18.53671805020799 4 22.049307564964145 23.784686235245015 37.08562933504664 17.080376864744203 5 19.455712764909748 28.546331946743702 32.783949951461544 19.214005336885005 6 69.84866319941098 1.6093193830223278 24.01035487002481 4.531662547541891 7 70.54827348487336 1.4009088649505472 20.035172792203834 8.015644857972266 8 57.505826959241766 3.070350274113294 28.94158033700225 10.48224242964269 9 31.157747628181383 17.32152152809368 32.055826255785924 19.464904587939014 10 24.206478359353383 18.98233387890242 44.25074918047394 12.560438581270253 11 20.749790135673184 15.572167535043826 42.80144255345092 20.876599775832073 12 16.730712413181827 18.999873377948067 45.450469674018564 18.818944534851546 13 11.663016512453513 22.284543199223386 45.123222015354095 20.929218272969006 14 10.643568303217608 22.35723363644464 45.646217986896964 21.35298007344079 15 11.10606707216988 17.907265760928187 49.82512087716254 21.161546289739395 16 11.616588426744453 24.967054817969075 41.38721492451919 22.029141830767283 17 13.331613774603369 22.28444940511084 42.870943990845696 21.512992829440098 18 14.958566450783884 28.863262253028378 40.552353528769 15.62581776741874 19 14.578418912644853 24.098427541703206 37.66959147974281 23.653562065909124 20 12.024686610421465 30.28452444040088 36.103604976715616 21.58718397246205 21 12.929143237678971 24.577715456800778 37.83223047089334 24.66091083462691 22 11.042193281527718 27.04890893998584 33.2453231910633 28.663574587423145 23 10.765031678961511 23.747918943127942 43.63161424357393 21.855435134336616 24 16.62012915449297 21.46253159689166 39.59443425736167 22.3229049912537 25 12.93805367837061 25.029803079260716 39.046770434219845 22.98537280814883 26 15.609966562398878 20.774082810821966 38.84614482748918 24.76980579928998 27 21.688387819896544 21.498454741995847 39.73109227933762 17.082065158769986 28 15.691473646199228 21.443772774382953 37.447111844789504 25.417641734628315 29 22.992313572477055 20.414288595104885 34.78101419573893 21.812383636679126 30 21.7014252015401 19.416131649416364 37.13308915599367 21.749353993049855 31 21.399877129712568 17.789460355573482 37.05636557193305 23.7542969427809 32 24.05809607330948 17.579642925813545 35.05948891588075 23.302772084996228 33 16.87037184675918 15.467118128995045 45.26710218399591 22.395407840249867 34 18.671500189933077 14.464552860016976 41.32549839846553 25.53844855158442 35 21.417229040533126 15.511576538340687 39.836892038286756 23.234302382839427 36 18.182457687130977 16.06055347905812 38.953070115788826 26.803918718022068 37 15.184328879676222 16.92655452017277 41.223450404018145 26.66566619613287 38 14.156439200311397 17.240858591306225 33.85310904034554 34.74959316803684 39 20.55920049898468 15.372948840001314 35.22522311274521 28.842627548268794 40 14.828567810798516 14.028128854351813 41.3906853066833 29.75261802816637 41 18.194463333536554 18.767170184727505 33.94802868223962 29.090337799496325 42 19.466123911402082 14.616499322337537 40.30295498351568 25.614421782744696 43 23.295080967767653 17.803248090117382 38.057054958660245 20.844615983454716 44 16.963228018177297 20.519994559941473 38.83967303372367 23.677104388157556 45 18.481004347357118 17.778955414968603 38.50117008155398 25.238870156120303 46 23.15570291652793 15.630507473045919 35.84370149085742 25.370088119568734 47 16.39530466672607 14.554689002171333 40.45424488704844 28.59576144405416 48 17.783645120595782 12.693813809307189 35.52180009660793 34.000740973489094 49 20.20362701833206 12.943399942785591 41.01485229772127 25.838120741161074 50 18.10939207345955 12.55265366992914 42.03139288946833 27.306561367142983 51 15.384391721731628 12.521420230452135 39.593308728011145 32.5008793198051 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 381.0 1 2045.5 2 3710.0 3 46973.5 4 90237.0 5 49137.5 6 8038.0 7 7401.0 8 6764.0 9 7119.5 10 7475.0 11 7695.5 12 7916.0 13 7668.5 14 7421.0 15 6738.5 16 6056.0 17 5466.5 18 4877.0 19 4408.5 20 3940.0 21 3620.0 22 3300.0 23 3216.0 24 3132.0 25 3146.5 26 3676.5 27 4192.0 28 4295.0 29 4398.0 30 5620.0 31 6842.0 32 7886.5 33 8931.0 34 10253.5 35 11576.0 36 14088.0 37 16600.0 38 18368.5 39 20137.0 40 23942.0 41 27747.0 42 33165.0 43 38583.0 44 46068.5 45 53554.0 46 61109.0 47 68664.0 48 94670.5 49 120677.0 50 149705.0 51 178733.0 52 172611.5 53 166490.0 54 126862.5 55 87235.0 56 64899.5 57 42564.0 58 31608.0 59 20652.0 60 15752.5 61 10853.0 62 8948.0 63 7043.0 64 5868.5 65 4694.0 66 3734.5 67 2775.0 68 2382.0 69 1989.0 70 1766.0 71 1543.0 72 1456.5 73 1370.0 74 1163.5 75 696.5 76 436.0 77 367.0 78 298.0 79 212.0 80 126.0 81 89.5 82 53.0 83 36.5 84 20.0 85 13.5 86 7.0 87 9.5 88 12.0 89 7.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1066165.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.60832774506294 #Duplication Level Percentage of deduplicated Percentage of total 1 72.96021060467439 21.602298279320163 2 12.092102043505898 7.160538408617359 3 4.812543543838109 4.274740996000363 4 2.370671541594004 2.8076647991763557 5 1.4286457157686057 2.1149905292028452 6 0.9138452749072693 1.623445824463894 7 0.6475208097676055 1.3420405850143473 8 0.4895755157181188 1.159640986027222 9 0.3532315907907768 0.9412737039038946 >10 3.314773853957899 21.004356206279027 >50 0.3702555657586312 7.421210675341046 >100 0.22937304238090359 13.12745682201676 >500 0.009583831854350633 1.8936333055452332 >1k 0.006389221236233754 3.448550284059624 >5k 9.583831854350632E-4 2.148640068369906 >10k+ 3.194610618116877E-4 7.929518526662016 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 83833 7.8630418368639 No Hit CCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 9266 0.8690962468285865 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGCT 8154 0.7647971936801526 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 5296 0.49673362003067073 TruSeq Adapter, Index 13 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 4224 0.3961863313839791 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCC 3442 0.32283933537491855 No Hit TCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 2911 0.27303466161429046 TruSeq Adapter, Index 13 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTC 2433 0.22820107581847088 No Hit GCCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 2281 0.21394437071185043 No Hit ACCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 2138 0.20053181261812195 No Hit TCCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 1645 0.15429131513414904 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTC 1592 0.14932022716934057 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCT 1584 0.14856987426899215 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTT 1521 0.14266084517874814 No Hit ACTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGC 1518 0.14237946284111747 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGC 1451 0.13609525730069924 No Hit AGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 1446 0.13562628673798144 No Hit CGTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCT 1409 0.1321559045738699 No Hit GGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 1218 0.11424122907805077 No Hit TGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTGCTT 1176 0.11030187635122143 TruSeq Adapter, Index 13 (95% over 23bp) ATCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 1164 0.10917634700069877 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCG 1147 0.10758184708745831 No Hit TGCTGTCTCTTATACACATCTGACGCGTTGTCCCTCGTATGCCGTCTTCTG 1104 0.10354870024808543 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7932168097808501 0.0 2 0.0 0.0 0.0 2.631675209747084 0.0 3 0.0 0.0 0.0 4.383749232060704 0.0 4 0.0 0.0 0.0 5.465101555575356 0.0 5 0.0 0.0 0.0 11.14114607026117 0.0 6 0.0 0.0 0.0 12.75871933518733 0.0 7 0.0 0.0 0.0 17.540812163220515 0.0 8 0.0 0.0 0.0 23.785155205807733 0.0 9 0.0 0.0 0.0 28.33885936979736 0.0 10 0.0 0.0 0.0 31.152307569653853 0.0 11 0.0 0.0 0.0 33.60389808331731 0.0 12 0.0 0.0 0.0 35.29613146182814 0.0 13 0.0 0.0 0.0 35.97885880703268 0.0 14 0.0 0.0 0.0 36.47653036818879 0.0 15 0.0 0.0 0.0 37.93606055347906 0.0 16 0.0 0.0 0.0 39.72368254444668 0.0 17 0.0 0.0 0.0 41.63642588154742 0.0 18 0.0 0.0 0.0 42.64067944455127 0.0 19 0.0 0.0 0.0 43.71837379767672 0.0 20 0.0 0.0 0.0 44.868570999798344 0.0 21 0.0 0.0 0.0 45.943826705997665 0.0 22 0.0 0.0 0.0 47.007639530466676 0.0 23 0.0 0.0 0.0 47.78650584102836 0.0 24 5.627646752613338E-4 0.0 0.0 48.464637274718264 0.0 25 5.627646752613338E-4 0.0 0.0 49.073361065125944 0.0 26 5.627646752613338E-4 0.0 0.0 49.7238232356155 0.0 27 5.627646752613338E-4 0.0 0.0 50.3089109096622 0.0 28 5.627646752613338E-4 0.0 0.0 50.91951058232075 0.0 29 9.379411254355564E-4 0.0 0.0 51.6356286315908 0.0 30 9.379411254355564E-4 0.0 0.0 52.23797442234551 0.0 31 9.379411254355564E-4 0.0 0.0 52.7685677170044 0.0 32 9.379411254355564E-4 0.0 0.0 53.302068629152146 0.0 33 9.379411254355564E-4 0.0 0.0 53.817467277578984 0.0 34 0.001031735237979112 0.0 0.0 54.4146543921438 0.0 35 0.001031735237979112 0.0 0.0 54.87996698447238 0.0 36 0.001031735237979112 0.0 0.0 55.35043825299086 0.0 37 0.001031735237979112 0.0 0.0 55.839480755792955 0.0 38 0.001031735237979112 0.0 0.0 56.31764314154 0.0 39 0.001031735237979112 0.0 0.0 56.820660967111095 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 20 7.033056E-4 45.000004 21 GGTACTA 20 7.033056E-4 45.000004 6 ACACGGT 20 7.033056E-4 45.000004 35 ACCGGCC 25 3.890614E-5 45.000004 20 TGAAGTA 20 7.033056E-4 45.000004 36 CAACGAC 25 3.890614E-5 45.000004 11 GACACGA 20 7.033056E-4 45.000004 24 TGGCGTC 20 7.033056E-4 45.000004 45 CGGCACG 20 7.033056E-4 45.000004 23 GCAGTAC 50 2.1827873E-11 45.000004 37 CGCGATA 20 7.033056E-4 45.000004 10 GCCGATC 20 7.033056E-4 45.000004 8 CTAACGG 80 0.0 45.000004 1 CTTGCGG 200 0.0 45.000004 1 ACGGATT 20 7.033056E-4 45.000004 6 AACGCCA 25 3.890614E-5 45.000004 14 GGAACCG 20 7.033056E-4 45.000004 7 CGCAGTA 50 2.1827873E-11 45.000004 36 GCGATCG 20 7.033056E-4 45.000004 8 CATCGAA 20 7.033056E-4 45.000004 13 >>END_MODULE