##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043362_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2319469 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29466183855012 33.0 31.0 34.0 31.0 34.0 2 32.637917557854834 34.0 31.0 34.0 31.0 34.0 3 32.7899769300646 34.0 31.0 34.0 31.0 34.0 4 36.220128400077776 37.0 37.0 37.0 35.0 37.0 5 36.165852184271486 37.0 37.0 37.0 35.0 37.0 6 36.28752701588165 37.0 37.0 37.0 35.0 37.0 7 36.22545117007384 37.0 37.0 37.0 35.0 37.0 8 36.219520071188704 37.0 37.0 37.0 35.0 37.0 9 37.81536161940513 39.0 38.0 39.0 35.0 39.0 10 37.59553501253951 39.0 37.0 39.0 35.0 39.0 11 37.24866898415112 39.0 37.0 39.0 35.0 39.0 12 37.257237324577304 39.0 37.0 39.0 34.0 39.0 13 37.252641445089374 39.0 37.0 39.0 34.0 39.0 14 38.56715179206965 40.0 37.0 41.0 35.0 41.0 15 38.62961824452062 40.0 38.0 41.0 35.0 41.0 16 38.4940609251514 40.0 37.0 41.0 34.0 41.0 17 38.487878044500704 40.0 37.0 41.0 34.0 41.0 18 38.309425131355496 40.0 37.0 41.0 34.0 41.0 19 38.105174934435425 40.0 37.0 41.0 34.0 41.0 20 37.85965408462023 40.0 35.0 41.0 34.0 41.0 21 37.79698801751608 40.0 35.0 41.0 34.0 41.0 22 37.743878016908184 40.0 35.0 41.0 34.0 41.0 23 37.75013074113084 40.0 35.0 41.0 34.0 41.0 24 37.654453239081874 40.0 35.0 41.0 34.0 41.0 25 37.54864669456673 39.0 35.0 41.0 34.0 41.0 26 37.45042335120668 39.0 35.0 41.0 33.0 41.0 27 37.487918139884606 39.0 35.0 41.0 33.0 41.0 28 37.41913127530482 39.0 35.0 41.0 33.0 41.0 29 37.351912873161915 39.0 35.0 41.0 33.0 41.0 30 37.28205722947796 39.0 35.0 41.0 33.0 41.0 31 37.16766725487601 39.0 35.0 41.0 33.0 41.0 32 36.9311385493835 39.0 35.0 41.0 33.0 41.0 33 36.59053559241361 39.0 35.0 41.0 31.0 41.0 34 36.374864678079334 39.0 35.0 41.0 31.0 41.0 35 36.22486396670962 39.0 35.0 41.0 31.0 41.0 36 36.16328737310134 39.0 35.0 41.0 31.0 41.0 37 36.08110778803252 38.0 35.0 41.0 31.0 41.0 38 35.94109384518612 38.0 35.0 41.0 30.0 41.0 39 35.90301875127454 38.0 35.0 41.0 30.0 41.0 40 35.804253042398926 38.0 35.0 41.0 30.0 41.0 41 35.748252725084924 38.0 35.0 41.0 30.0 41.0 42 35.64975561216813 37.0 35.0 41.0 30.0 41.0 43 35.52727456154835 37.0 35.0 40.0 29.0 41.0 44 35.335330629553575 37.0 35.0 40.0 29.0 41.0 45 35.20516721715185 37.0 35.0 40.0 28.0 41.0 46 35.13810660974559 36.0 35.0 40.0 28.0 41.0 47 35.02823146159746 36.0 35.0 40.0 28.0 41.0 48 34.89858195992272 36.0 35.0 40.0 28.0 41.0 49 34.77071476273233 35.0 35.0 39.0 28.0 41.0 50 34.600111491035236 35.0 35.0 39.0 27.0 41.0 51 34.43651283979221 35.0 34.0 39.0 27.0 41.0 52 34.036031091598986 35.0 34.0 39.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 5.0 12 3.0 13 5.0 14 17.0 15 46.0 16 79.0 17 207.0 18 430.0 19 862.0 20 1628.0 21 2737.0 22 4244.0 23 6754.0 24 11114.0 25 18846.0 26 28824.0 27 35027.0 28 37745.0 29 38758.0 30 41180.0 31 46660.0 32 56276.0 33 73858.0 34 164414.0 35 236716.0 36 213310.0 37 239722.0 38 356054.0 39 702453.0 40 1494.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.663397527623783 17.818561058587115 23.72452488047911 27.79351653330999 2 33.15293284799236 20.358883865229497 24.675302838710067 21.81288044806807 3 27.319270057069094 21.225289064005597 31.573519628846086 19.88192125007922 4 23.915516870456127 24.14798387044621 29.253419640443568 22.683079618654098 5 21.871902577702052 32.54042196726923 26.889559636278822 18.698115818749894 6 80.68204403680325 2.198261757324629 14.50426800271959 2.615426203152532 7 80.5380455612901 2.0352071961298037 13.327964288378071 4.098782954202018 8 72.01005919889423 3.4996803147616973 18.016408065811614 6.473852420532459 9 43.707288176733556 16.529516022848334 22.306139896674626 17.457055903743488 10 29.33317927508408 16.64208489098151 32.228626465798854 21.796109368135554 11 25.31566492158335 13.82014590408408 37.774119852431745 23.090069321900835 12 21.51742489336999 15.221026881583674 39.895467453973296 23.366080771073033 13 17.77217113054755 18.62797045358226 41.45737666681469 22.142481749055495 14 17.881851406507266 17.892543508880696 40.9955468255881 23.230058259023938 15 21.558770563434994 14.573033741774518 40.54458153999902 23.323614154791464 16 21.153720959409245 18.04106888257614 36.46692411064774 24.338286047366875 17 21.97451226983417 19.722531320746256 35.483983618664446 22.818972790755126 18 22.515110139432775 24.77610177156927 32.35270658930988 20.356081499688074 19 23.954361968191858 20.817825114282623 31.096901920223985 24.130910997301537 20 22.982587825058236 24.606062853178894 32.51718388993343 19.894165431829443 21 20.941775897845584 19.159126506972072 34.02451164469109 25.87458595049125 22 22.55943062830329 21.415418787662176 31.618702384037036 24.4064481999975 23 22.946803772760056 19.685324529019358 34.51229570216287 22.855575996057716 24 25.57331009813022 18.286857897216994 31.38144980596852 24.758382198684266 25 20.225361925509674 19.515285610628986 33.96040214376653 26.298950320094818 26 19.865667529938964 18.83008567909293 33.99605685611664 27.30818993485147 27 23.70952144650349 20.604284860026155 33.156209460010025 22.529984233460333 28 23.73202659746692 21.764033061015258 29.915597061223924 24.588343280293895 29 25.02051116009742 19.149986483975425 32.60034947653968 23.22915287938748 30 29.598584848514896 19.35063585674135 28.7853383683938 22.265440926349953 31 29.291316245226817 19.02913985916604 27.19842343225971 24.48112046334743 32 29.353787440142547 19.86131308502075 26.509645095493838 24.275254379342858 33 26.340770236636057 19.63729629497096 30.461540982009243 23.560392486383737 34 24.515783569429036 23.320337542773796 28.576109445739522 23.587769442057642 35 26.466014419679677 24.3869609811556 26.210740475514005 22.936284123650715 36 26.23734139149952 24.530183416980353 26.789493629791995 22.442981561728136 37 24.759891164745035 26.771041130534616 26.61419488684695 21.854872817873403 38 22.81673089832199 22.48549129132573 27.37544670784563 27.322331102506652 39 23.85645162750612 19.9104191519697 32.48933268778328 23.743796532740898 40 21.051154380593147 19.635528649014063 34.371918745195565 24.941398225197233 41 22.30437225071773 23.18539286362525 28.373778653648746 26.136456232008275 42 21.292287157103633 18.26918143764801 30.964716493300838 29.47381491194752 43 23.66709794353794 19.33295939717237 31.590333822094625 25.409608837195062 44 24.701645074799448 20.8768472439166 30.850121299314626 23.571386381969322 45 25.17149399280611 20.883960941060216 29.65402857291906 24.29051649321461 46 24.191010959836063 20.51887738098677 29.846357075692755 25.443754583484406 47 21.673451984053248 22.0318529801433 31.908639434284314 24.38605560151914 48 23.41833411009158 19.973752613205868 29.713180042501108 26.89473323420145 49 22.45375989073361 18.144109707868484 33.46416787635446 25.937962525043446 50 21.956145997208846 18.38170719246517 34.60572225798232 25.05642455234366 51 21.05425853934672 16.83919897183364 33.26739870203051 28.83914378678913 52 18.97348056818177 18.589685828954817 36.216392631244474 26.220440971618935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 592.0 1 3618.0 2 6644.0 3 59531.0 4 112418.0 5 64318.5 6 16219.0 7 14703.0 8 13187.0 9 12915.0 10 12643.0 11 12335.5 12 12028.0 13 11440.0 14 10189.5 15 9527.0 16 8857.5 17 8188.0 18 7738.0 19 7288.0 20 6884.5 21 6481.0 22 6522.5 23 6564.0 24 6621.5 25 6679.0 26 7578.5 27 8478.0 28 9159.5 29 9841.0 30 11136.0 31 12431.0 32 13885.0 33 15339.0 34 18749.5 35 22160.0 36 23836.0 37 25512.0 38 29020.5 39 35015.0 40 37501.0 41 42309.5 42 47118.0 43 56902.5 44 66687.0 45 76187.0 46 85687.0 47 103012.0 48 120337.0 49 155253.5 50 190170.0 51 207476.0 52 224782.0 53 209757.0 54 194732.0 55 181006.0 56 167280.0 57 156673.0 58 146066.0 59 140601.0 60 135136.0 61 132539.0 62 129942.0 63 127684.0 64 106859.0 65 88292.0 66 76358.0 67 64424.0 68 54051.5 69 43679.0 70 37704.5 71 31730.0 72 31123.5 73 30517.0 74 23801.0 75 17085.0 76 12721.5 77 8358.0 78 6503.5 79 4649.0 80 3508.5 81 2368.0 82 1667.0 83 966.0 84 739.5 85 513.0 86 356.5 87 200.0 88 129.0 89 68.0 90 78.0 91 74.5 92 71.0 93 41.5 94 12.0 95 8.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2319469.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.021761649650223 #Duplication Level Percentage of deduplicated Percentage of total 1 74.88957029062327 20.236481184379485 2 9.8965776432451 5.348459244460524 3 3.6085937035272506 2.925316768414257 4 1.7682699631022731 1.9112707790074162 5 1.0466021814737925 1.414051734489439 6 0.7300475952471825 1.1836303267001809 7 0.5637205187306331 1.0662905045909448 8 0.466841753605739 1.009190927523121 9 0.42752950842819515 1.0397340427444934 >10 5.774097356694969 36.490905768719536 >50 0.676876583944638 11.892700959446987 >100 0.13890807385845702 6.257190869581798 >500 0.007065615724937552 1.2876615388658241 >1k 0.004335718740302589 2.1749872611326224 >5k 4.817465267002877E-4 0.755326854491572 >10k+ 4.817465267002877E-4 5.006801235451832 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 84872 3.659113357410683 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 18495 0.7973807798250375 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 12018 0.5181358319511923 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 6247 0.26932888518880826 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCTT 5739 0.24742732064968317 Illumina Single End Adapter 2 (95% over 21bp) GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5421 0.233717286154719 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4705 0.20284815188303876 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 4393 0.189396797284206 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3545 0.15283670529763493 No Hit CGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 3242 0.1397733705429993 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2764 0.11916520548453115 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAA 2335 0.10066959291113614 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2576882898628953 0.0 2 0.0 0.0 0.0 0.8542041303419016 0.0 3 0.0 0.0 0.0 1.4220065023503223 0.0 4 0.0 0.0 0.0 1.804852748624793 0.0 5 0.0 0.0 0.0 3.767112214045542 0.0 6 0.0 0.0 0.0 4.401740225887908 0.0 7 0.0 0.0 0.0 6.427290039228806 0.0 8 0.0 0.0 0.0 8.664655574185298 0.0 9 0.0 0.0 0.0 10.699431637154884 0.0 10 0.0 0.0 0.0 11.829992123197163 0.0 11 4.311331602189984E-5 0.0 0.0 12.795342382243522 0.0 12 4.311331602189984E-5 0.0 0.0 13.503133691375051 0.0 13 4.311331602189984E-5 0.0 0.0 13.860111948036382 0.0 14 4.311331602189984E-5 0.0 0.0 14.07994674643205 0.0 15 4.311331602189984E-5 0.0 0.0 14.718670523296495 0.0 16 4.311331602189984E-5 0.0 0.0 15.411199718556272 0.0 17 4.311331602189984E-5 0.0 0.0 16.310586604089124 0.0 18 4.311331602189984E-5 0.0 0.0 16.80263887984707 0.0 19 4.311331602189984E-5 0.0 0.0 17.3397445708479 0.0 20 4.311331602189984E-5 0.0 0.0 17.9407873095092 0.0 21 4.311331602189984E-5 0.0 0.0 18.542476747910836 0.0 22 4.311331602189984E-5 0.0 0.0 19.13554352310809 0.0 23 4.311331602189984E-5 0.0 0.0 19.661181072047093 0.0 24 8.622663204379967E-5 0.0 0.0 20.083044869321384 0.0 25 8.622663204379967E-5 0.0 0.0 20.49434590417031 0.0 26 8.622663204379967E-5 0.0 0.0 20.91508875522803 0.0 27 1.7245326408759935E-4 0.0 0.0 21.35829364393316 0.0 28 1.7245326408759935E-4 0.0 0.0 21.804602691391867 0.0 29 1.7245326408759935E-4 0.0 0.0 22.258930815630645 0.0 30 1.7245326408759935E-4 0.0 0.0 22.68385565834249 0.0 31 1.7245326408759935E-4 0.0 0.0 23.122576762181343 0.0 32 1.7245326408759935E-4 0.0 0.0 23.59678012510622 0.0 33 1.7245326408759935E-4 0.0 0.0 24.031060557394817 0.0 34 1.7245326408759935E-4 0.0 0.0 24.5312612498809 0.0 35 1.7245326408759935E-4 0.0 0.0 24.93725934685913 0.0 36 1.7245326408759935E-4 0.0 0.0 25.37684271701842 0.0 37 2.155665801094992E-4 0.0 0.0 25.906834710875636 0.0 38 2.155665801094992E-4 0.0 0.0 26.481578326763582 0.0 39 2.155665801094992E-4 0.0 0.0 27.146256319873213 0.0 40 2.155665801094992E-4 0.0 0.0 27.725699287207547 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATACGG 145 0.0 46.000004 1 TACGGTC 20 6.31279E-4 46.0 23 ACGTATA 25 3.418239E-5 46.0 46 CGAAGTA 20 6.31279E-4 46.0 20 CGTTTTT 20740 0.0 45.256992 1 CCGGTAT 140 0.0 42.714287 42 CGGTCTA 350 0.0 42.714283 30 ACGGGAT 530 0.0 42.528305 4 ACAACGG 130 0.0 42.46154 1 GCACTTA 4760 0.0 41.84454 35 TCACGAC 385 0.0 41.81818 24 CCGCACT 4770 0.0 41.756813 33 CGCACTT 4795 0.0 41.683002 34 ACCCGCA 4820 0.0 41.657677 31 CACTTAC 4785 0.0 41.625916 36 CCCGCAC 4855 0.0 41.357365 32 CTTACTG 4780 0.0 41.188286 38 TACGGGA 330 0.0 41.121212 3 CACGACG 375 0.0 41.093334 25 ACTTACT 4830 0.0 40.95238 37 >>END_MODULE