##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043357_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1260208 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.33778868250321 33.0 31.0 34.0 31.0 34.0 2 32.62441358886787 34.0 31.0 34.0 31.0 34.0 3 32.73638796135241 34.0 31.0 34.0 31.0 34.0 4 36.2221299975877 37.0 37.0 37.0 35.0 37.0 5 36.20228803499105 37.0 37.0 37.0 35.0 37.0 6 36.35101665756764 37.0 37.0 37.0 35.0 37.0 7 36.29618761347333 37.0 37.0 37.0 35.0 37.0 8 36.20954080596219 37.0 37.0 37.0 35.0 37.0 9 37.74315033708721 39.0 38.0 39.0 35.0 39.0 10 37.56932823787819 39.0 37.0 39.0 35.0 39.0 11 37.32406555108363 39.0 37.0 39.0 35.0 39.0 12 37.33856712542691 39.0 37.0 39.0 35.0 39.0 13 37.34634361946599 39.0 37.0 39.0 35.0 39.0 14 38.70176351840331 40.0 38.0 41.0 35.0 41.0 15 38.77924437870574 41.0 38.0 41.0 35.0 41.0 16 38.70330294681513 40.0 38.0 41.0 35.0 41.0 17 38.66572661021038 40.0 38.0 41.0 34.0 41.0 18 38.50717976714955 40.0 38.0 41.0 35.0 41.0 19 38.297358055178194 40.0 37.0 41.0 35.0 41.0 20 38.03353335322423 40.0 35.0 41.0 34.0 41.0 21 37.972049852087906 40.0 35.0 41.0 34.0 41.0 22 37.942412681081215 40.0 35.0 41.0 34.0 41.0 23 37.89254948389472 40.0 35.0 41.0 34.0 41.0 24 37.81254285006919 40.0 35.0 41.0 34.0 41.0 25 37.754600827799855 40.0 35.0 41.0 34.0 41.0 26 37.722514061170855 40.0 35.0 41.0 34.0 41.0 27 37.70367669464088 40.0 35.0 41.0 34.0 41.0 28 37.60356941076394 40.0 35.0 41.0 34.0 41.0 29 37.56830697789571 39.0 35.0 41.0 34.0 41.0 30 37.46037558879169 40.0 35.0 41.0 34.0 41.0 31 37.35711327019032 40.0 35.0 41.0 33.0 41.0 32 37.129527823978265 40.0 35.0 41.0 33.0 41.0 33 36.83127150438658 39.0 35.0 41.0 32.0 41.0 34 36.599970004951565 39.0 35.0 41.0 31.0 41.0 35 36.43759522237599 39.0 35.0 41.0 31.0 41.0 36 36.353440860556354 39.0 35.0 41.0 31.0 41.0 37 36.24844628823178 39.0 35.0 41.0 31.0 41.0 38 36.13388504119955 39.0 35.0 41.0 31.0 41.0 39 36.035402885872806 39.0 35.0 41.0 30.0 41.0 40 35.91309053743509 38.0 35.0 41.0 30.0 41.0 41 35.81866882292447 38.0 35.0 41.0 30.0 41.0 42 35.6925626563234 38.0 35.0 40.0 29.0 41.0 43 35.57060421771644 38.0 35.0 40.0 29.0 41.0 44 35.44036778055686 37.0 35.0 40.0 29.0 41.0 45 35.357378305803486 37.0 35.0 40.0 28.0 41.0 46 35.2246184756802 37.0 35.0 40.0 28.0 41.0 47 35.066930221042874 37.0 35.0 40.0 27.0 41.0 48 34.98251717176847 36.0 35.0 40.0 27.0 41.0 49 34.89007132155962 36.0 35.0 40.0 27.0 41.0 50 34.72533899165852 36.0 35.0 40.0 27.0 41.0 51 34.281287692190496 35.0 34.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 4.0 14 7.0 15 19.0 16 47.0 17 95.0 18 211.0 19 422.0 20 829.0 21 1412.0 22 2201.0 23 3475.0 24 5710.0 25 9797.0 26 15154.0 27 19450.0 28 20171.0 29 19930.0 30 20689.0 31 22983.0 32 27292.0 33 36221.0 34 79216.0 35 128623.0 36 109818.0 37 117183.0 38 193566.0 39 425598.0 40 83.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.467979889034194 17.383082792681844 22.621503751761615 28.527433566522355 2 34.14047522313777 19.687384939629013 24.802889681703338 21.36925015552988 3 26.16861660932164 20.980822213475868 32.76816208118025 20.082399096022243 4 23.966678516562347 23.917004177088227 30.543529322143648 21.57278798420578 5 21.787038330180415 31.838077523710375 28.400470398537387 17.97441374757183 6 78.93062097685461 1.8893706435762985 16.304451328669554 2.875557050899534 7 79.12876287089115 2.1027481177710348 14.521332986300676 4.247156025037137 8 69.95956223099678 3.4981526859058185 19.97519457105494 6.567090512042456 9 39.35945494711984 16.917604078056954 25.61410497314729 18.10883600167591 10 27.683525259322273 17.832929167248583 34.81552251691784 19.668023056511306 11 24.699017939895636 15.200030471160316 38.3260541117022 21.774897477241854 12 20.31283724591496 17.972112540152104 40.51362949608318 21.20142071784975 13 16.21319655168036 21.416940695504234 41.974102687810266 20.395760065005142 14 16.386898035879792 19.83648731003136 41.790244150172036 21.986370503916813 15 19.507494000990313 16.059650470398537 42.48013026421035 21.952725264400797 16 18.080427992839276 19.906634460343053 37.75797328694945 24.25496425986821 17 19.431792212079277 19.898381854424034 37.246232367990046 23.423593565506646 18 20.902977921105087 25.027852544976703 34.11920889250028 19.949960641417924 19 22.20498520879093 21.145001460076433 33.101043637240835 23.548969693891802 20 20.511058491931493 25.221312672193797 34.948516435382096 19.319112400492617 21 19.4822600713533 19.98860505567335 35.535562383352584 24.99357248962076 22 19.532727930627324 21.68634066757234 32.49471515813263 26.28621624366771 23 19.88901832078514 20.292205731117402 38.29423396772596 21.524541980371495 24 23.627052042202557 18.635177684953593 33.80219773243782 23.935572540406028 25 17.937356372916216 21.934394957022967 34.494623109835835 25.633625560224978 26 18.064398892881176 20.264591242080673 34.764181785863926 26.906828079174232 27 21.930348006043445 20.971934791716922 34.6520574381372 22.445659764102434 28 21.575247895585488 21.386707591127813 32.50209489227176 24.535949621014943 29 23.230530198189506 19.68048131736983 33.942333329101224 23.146655155339435 30 24.05523532623186 20.27736691085916 30.81372281401166 24.853674948897325 31 27.73835747749578 19.380689536965328 29.871497403603215 23.009455581935683 32 24.89128778741287 20.09112781382121 30.349116971166662 24.668467427599253 33 20.948922717519647 20.892344755786347 32.09486053095997 26.06387199573404 34 21.830205807295304 20.385603011566346 34.54628124880972 23.23790993232863 35 23.291710574762263 24.06293246829095 29.996159364168456 22.649197592778336 36 21.8885295125884 23.85995010347498 30.938860886456837 23.312659497479782 37 21.370043675329786 25.252974112210048 32.39330332770463 20.983678884755534 38 19.849183626829856 24.87906758249432 29.782147074133793 25.489601716542033 39 22.734580323248228 22.42177481812526 33.036689181468454 21.806955677158058 40 18.66985450020949 21.513750111092772 34.845041453474344 24.97135393522339 41 21.314338585376383 24.75702423726877 28.567903076317556 25.36073410103729 42 20.63032451785737 19.75800820182065 32.51145842591065 27.100208854411335 43 23.140703756840143 19.805540037835023 32.7305492426647 24.323206962660134 44 21.58826162030395 20.907500983964553 33.2255468938461 24.278690501885404 45 22.22998108248797 21.074457549864782 32.10446212053883 24.591099247108414 46 22.37543326181075 21.751091883244673 31.913382552721455 23.960092302223124 47 19.395210949303607 22.534851389611873 34.665150514835645 23.40478714624887 48 21.483755062656325 20.63976740347625 31.077171387580467 26.79930614628696 49 21.19332681589071 18.935604281198025 34.82544151441667 25.045627388494594 50 20.002412300191715 19.315700265353023 35.647051915239395 25.034835519215875 51 19.35870903850793 18.121611670454403 34.18173825273288 28.337941038304788 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 401.0 1 2310.5 2 4220.0 3 34334.0 4 64448.0 5 36941.5 6 9435.0 7 8595.5 8 7756.0 9 7651.5 10 7547.0 11 7428.5 12 7310.0 13 6966.0 14 6622.0 15 6249.0 16 5876.0 17 5542.5 18 5209.0 19 4860.5 20 4512.0 21 4444.5 22 4377.0 23 4395.0 24 4413.0 25 4627.5 26 5335.5 27 5829.0 28 6737.5 29 7646.0 30 9439.5 31 11233.0 32 12396.0 33 13559.0 34 15476.5 35 17394.0 36 19484.0 37 21574.0 38 23525.5 39 25477.0 40 29855.0 41 34233.0 42 39342.5 43 44452.0 44 51542.5 45 58633.0 46 71470.0 47 84307.0 48 106092.0 49 127877.0 50 132179.5 51 136482.0 52 115271.0 53 94060.0 54 84443.5 55 74827.0 56 69809.0 57 64791.0 58 61647.0 59 58503.0 60 56224.5 61 53946.0 62 50998.5 63 48051.0 64 46733.5 65 45416.0 66 37535.5 67 29655.0 68 24357.0 69 19059.0 70 16151.0 71 13243.0 72 13128.0 73 13013.0 74 11227.0 75 7364.5 76 5288.0 77 3875.5 78 2463.0 79 1927.0 80 1391.0 81 1034.0 82 677.0 83 539.0 84 401.0 85 306.0 86 211.0 87 137.0 88 63.0 89 44.0 90 25.0 91 15.5 92 6.0 93 8.0 94 10.0 95 7.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1260208.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.921106613407783 #Duplication Level Percentage of deduplicated Percentage of total 1 74.06948405363067 21.421714451151605 2 10.70974982833975 6.194756331766793 3 4.0152208506881495 3.4837389089738964 4 1.9347004887924517 2.2381471640551456 5 1.1096193435914095 1.604570966815336 6 0.7340071803578543 1.2736979950881802 7 0.5571641784070226 1.1279663223416878 8 0.43604928614545246 1.008882231465039 9 0.37854411394389537 0.9853123209524443 >10 5.428637495735635 37.194466985127285 >50 0.516306259677931 9.572978047043268 >100 0.09888356061927271 5.204395395353631 >500 0.007201603853173581 1.4856655121136322 >1k 0.0036008019265867906 2.0553869141492274 >5k 5.539695271671985E-4 1.0875334299824582 >10k+ 2.7698476358359927E-4 4.060787023620416 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50692 4.022510569683735 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 7997 0.634577783984866 No Hit CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 5579 0.44270469636758375 No Hit CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 4671 0.37065309853611467 No Hit GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 3660 0.2904282467656133 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 3476 0.275827482447342 No Hit CGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG 2093 0.1660836941203357 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCC 1770 0.14045300458337034 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 1577 0.12513807244518366 No Hit TCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1459 0.1157745388062923 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 1380 0.10950573238703452 No Hit GCCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTG 1358 0.10775998882724122 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.38200043167477116 0.0 2 0.0 0.0 0.0 1.3223213945634371 0.0 3 0.0 0.0 0.0 2.1060015489506494 0.0 4 0.0 0.0 0.0 2.6164728362302094 0.0 5 0.0 0.0 0.0 5.23969059075962 0.0 6 0.0 0.0 0.0 5.804438632352754 0.0 7 0.0 0.0 0.0 7.756179932201668 0.0 8 0.0 0.0 0.0 10.02929675101253 0.0 9 0.0 0.0 0.0 11.839712174498178 0.0 10 0.0 0.0 0.0 13.122198875106331 0.0 11 0.0 0.0 0.0 14.293434099767657 0.0 12 0.0 0.0 0.0 15.167258103424196 0.0 13 0.0 0.0 0.0 15.59417175577365 0.0 14 0.0 0.0 0.0 15.883012962939452 0.0 15 0.0 0.0 0.0 16.833094219366963 0.0 16 0.0 0.0 0.0 17.837769638028007 0.0 17 7.935197999060473E-5 0.0 0.0 19.008687454769372 0.0 18 7.935197999060473E-5 0.0 0.0 19.66588055305156 0.0 19 7.935197999060473E-5 0.0 0.0 20.341086550791616 0.0 20 7.935197999060473E-5 0.0 0.0 21.12389383339893 0.0 21 7.935197999060473E-5 0.0 0.0 21.860042151771772 0.0 22 2.3805593997181418E-4 0.0 0.0 22.595317598364716 0.0 23 3.174079199624189E-4 0.0 0.0 23.283140560923275 0.0 24 6.348158399248379E-4 0.0 0.0 23.79829361502228 0.0 25 8.72871779896652E-4 0.0 0.0 24.30471795132232 0.0 26 8.72871779896652E-4 0.0 0.0 24.791859756484644 0.0 27 8.72871779896652E-4 0.0 0.0 25.31359902492287 0.0 28 8.72871779896652E-4 0.0 0.0 25.853589248758936 0.0 29 8.72871779896652E-4 0.0 0.0 26.40127661465409 0.0 30 8.72871779896652E-4 0.0 0.0 26.925475794472025 0.0 31 8.72871779896652E-4 0.0 0.0 27.408094536774882 0.0 32 8.72871779896652E-4 0.0 0.0 27.947846704670976 0.0 33 8.72871779896652E-4 0.0 0.0 28.442368243972425 0.0 34 8.72871779896652E-4 0.0 0.0 28.994419968767062 0.0 35 8.72871779896652E-4 0.0 0.0 29.44315541561393 0.0 36 8.72871779896652E-4 0.0 0.0 29.930455924736233 0.0 37 8.72871779896652E-4 0.0 0.0 30.47290605995201 0.0 38 8.72871779896652E-4 0.0 0.0 31.02836991988624 0.0 39 8.72871779896652E-4 0.0 0.0 31.67389827710981 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGG 60 0.0 45.000004 1 AATCGAG 35 1.2120472E-7 45.000004 30 CGGAATA 25 3.8910206E-5 45.0 5 CCCGTTA 25 3.8910206E-5 45.0 42 GCCGATT 25 3.8910206E-5 45.0 8 CGCTAAT 20 7.033547E-4 45.0 33 CTTGACG 20 7.033547E-4 45.0 11 ACGTCGA 20 7.033547E-4 45.0 29 TATACGG 50 2.1827873E-11 45.0 1 CGTTTAG 20 7.033547E-4 45.0 28 GCGTAGG 165 0.0 45.0 1 CGTTTTT 12110 0.0 44.163914 1 CGGTCTA 290 0.0 43.448273 30 CGACGGT 300 0.0 42.750004 27 TACGAAA 180 0.0 42.5 19 CGTAGGG 525 0.0 42.428574 2 CACGACG 320 0.0 42.1875 25 CTCACGT 245 0.0 41.32653 44 GTAGGGT 540 0.0 41.25 3 GCACCGA 290 0.0 41.12069 8 >>END_MODULE