##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043356_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2923522 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39161258235785 33.0 31.0 34.0 31.0 34.0 2 32.72947732221615 34.0 31.0 34.0 31.0 34.0 3 32.86152387428588 34.0 31.0 34.0 31.0 34.0 4 36.258166348671224 37.0 37.0 37.0 35.0 37.0 5 36.20310365374367 37.0 37.0 37.0 35.0 37.0 6 36.34595532374991 37.0 37.0 37.0 35.0 37.0 7 36.29250883010287 37.0 37.0 37.0 35.0 37.0 8 36.27500391650892 37.0 37.0 37.0 35.0 37.0 9 37.89069143314126 39.0 38.0 39.0 35.0 39.0 10 37.65713136415597 39.0 37.0 39.0 35.0 39.0 11 37.23712084260013 39.0 35.0 39.0 35.0 39.0 12 37.22641628829884 39.0 37.0 39.0 35.0 39.0 13 37.164506372792815 39.0 37.0 39.0 34.0 39.0 14 38.37050071796963 40.0 36.0 41.0 34.0 41.0 15 38.48914870488404 40.0 37.0 41.0 35.0 41.0 16 38.35992443361124 40.0 37.0 41.0 34.0 41.0 17 38.296629202721924 40.0 36.0 41.0 34.0 41.0 18 38.181351465800496 40.0 36.0 41.0 34.0 41.0 19 38.004195966372066 40.0 36.0 41.0 34.0 41.0 20 37.67593984242294 40.0 35.0 41.0 34.0 41.0 21 37.6717199323282 39.0 35.0 41.0 34.0 41.0 22 37.64594006817804 39.0 35.0 41.0 34.0 41.0 23 37.65250509488213 39.0 35.0 41.0 34.0 41.0 24 37.59550261636478 39.0 35.0 41.0 34.0 41.0 25 37.485489419953055 39.0 35.0 41.0 34.0 41.0 26 37.38321346649692 39.0 35.0 41.0 34.0 41.0 27 37.42578198487988 39.0 35.0 41.0 34.0 41.0 28 37.43771074751618 39.0 35.0 41.0 34.0 41.0 29 37.343528798483476 39.0 35.0 41.0 33.0 41.0 30 37.28164727339148 39.0 35.0 41.0 33.0 41.0 31 37.20197214182072 39.0 35.0 41.0 33.0 41.0 32 36.96058213346778 39.0 35.0 41.0 33.0 41.0 33 36.493873485474026 39.0 35.0 41.0 31.0 41.0 34 36.37037107981401 39.0 35.0 41.0 31.0 41.0 35 36.26130673892654 39.0 35.0 41.0 31.0 41.0 36 36.227733535099105 39.0 35.0 41.0 31.0 41.0 37 36.172653395459314 39.0 35.0 41.0 31.0 41.0 38 36.09367947290973 38.0 35.0 41.0 31.0 41.0 39 36.046720701947855 38.0 35.0 41.0 31.0 41.0 40 35.951492070181104 38.0 35.0 41.0 31.0 41.0 41 35.91086196717521 38.0 35.0 41.0 31.0 41.0 42 35.81596375878136 38.0 35.0 41.0 31.0 41.0 43 35.70857650464063 37.0 35.0 41.0 30.0 41.0 44 35.52798234458301 37.0 35.0 40.0 30.0 41.0 45 35.429437849279054 37.0 35.0 40.0 30.0 41.0 46 35.40673372733299 37.0 35.0 40.0 30.0 41.0 47 35.32906610588188 36.0 35.0 40.0 30.0 41.0 48 35.23829647938343 36.0 35.0 40.0 29.0 41.0 49 35.19117454905419 36.0 35.0 40.0 29.0 41.0 50 35.10707051289506 36.0 35.0 40.0 29.0 41.0 51 34.987560209911194 35.0 35.0 40.0 29.0 41.0 52 34.614801598893386 35.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 5.0 12 5.0 13 12.0 14 23.0 15 54.0 16 128.0 17 233.0 18 503.0 19 1126.0 20 1983.0 21 3289.0 22 5107.0 23 8061.0 24 13605.0 25 24083.0 26 35699.0 27 42704.0 28 44910.0 29 45355.0 30 48301.0 31 55764.0 32 66742.0 33 89061.0 34 231617.0 35 320931.0 36 254465.0 37 280326.0 38 392716.0 39 951864.0 40 4849.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.156578948268564 18.150709999787924 24.36677404856197 28.325937003381537 2 34.060253351950145 20.079069013333918 25.164407861476672 20.696269773239266 3 26.96121322158684 21.16252246434267 32.680547640825004 19.19571667324549 4 24.378164419491284 23.593391806184457 30.52855425750174 21.499889516822517 5 23.08386938767692 31.126018548859903 27.45363298104136 18.336479082421818 6 79.82211182265773 2.0483854747800767 15.457656894663355 2.671845807898829 7 79.8270031831469 1.9534657170358218 14.011113991959014 4.208417107858262 8 70.78007280259907 3.3600568081923106 19.14358776845189 6.716282620756744 9 46.4870454198737 14.063413923343147 23.104016320041374 16.34552433674178 10 31.162447212642835 14.939925199810366 32.01911940460855 21.87850818293825 11 27.399793810342455 12.149079090220631 37.010154190732955 23.44097290870395 12 23.361684981334157 13.821000833925655 39.481180576031235 23.33613360870895 13 18.240225317271427 16.934916173026917 43.74148715145636 21.083371358245294 14 18.607350996503534 16.323051442746113 43.68590350953404 21.383694051216306 15 23.75928759899874 15.108591623391238 40.256033647087314 20.876087130522706 16 22.92813257434013 17.842896342151693 36.44012256449584 22.78884851901234 17 22.575783592529834 19.086362271260487 37.44640881785736 20.891445318352318 18 23.971907856345872 24.367116101743033 32.905276580781674 18.755699461129417 19 24.77628011692746 20.979352985884834 31.263250285101325 22.98111661208638 20 22.825414004067696 24.878964481881784 34.19710882969241 18.098512684358113 21 21.59149135871049 19.2190104948757 34.882036119447704 24.307462026966103 22 23.524946964654276 19.86788537934724 32.46224930067227 24.14491835532621 23 23.528743754964047 18.705486054149755 34.46743345868442 23.298336732201776 24 26.50087805051578 16.555202936731792 31.56199953343946 25.381919479312963 25 18.68834918977863 18.396509415697913 35.163238039597445 27.75190335492601 26 17.87268917422205 19.313143530303517 35.489488363692836 27.324678931781598 27 21.216327429723464 21.626722836359704 33.71088023281508 23.446069501101753 28 24.24014596093342 22.29427382451714 30.803051935302694 22.662528279246743 29 23.125976134265454 18.051446166644205 35.7402475507282 23.082330148362146 30 26.344662362725508 20.162701016103178 30.46691627427466 23.025720346896655 31 28.432828622462907 17.66311319018636 32.10312766587698 21.800930521473756 32 28.202626831609273 19.397562255389218 30.115319809462697 22.284491103538816 33 19.847088545938767 21.16833736842069 36.52676463525843 22.457809450382108 34 21.388038126615776 23.599138299626272 34.57353835544935 20.4392852183086 35 24.619140885548322 24.17758443411748 29.44140663213754 21.76186804819666 36 25.08895092973475 23.935787040425897 28.865286459277545 22.109975570561808 37 22.565556202416126 25.444344184856483 29.714843945077206 22.275255667650185 38 21.529955991437724 21.89249815804362 28.919330861885083 27.658214988633574 39 22.628767630276084 19.784082349987447 32.88314573996707 24.7040042797694 40 18.565894150959014 21.01020618281648 34.58838346350737 25.835516202717134 41 20.31419636999482 23.25007302835416 29.61294630243932 26.822784299211705 42 19.65817257403912 18.51362842489299 32.10258038078728 29.72561862028061 43 22.048782256470105 18.90226924921379 33.599644538334246 25.44930395598186 44 23.475109816173777 19.676369803271534 32.37677021072528 24.471750169829402 45 21.940454014028283 21.36580466984685 31.914793184385136 24.77894813173973 46 22.053434179732527 20.61161161092682 32.05937906401935 25.275575145321294 47 20.522814605123546 20.61681081927894 34.30311111050302 24.557263465094497 48 22.76151846984562 19.33298261480502 31.150099092806556 26.75539982254281 49 20.932183852216607 18.44655179608705 34.800764283627764 25.82050006806858 50 20.56057727631261 17.95885237053116 35.89488979388559 25.585680559270635 51 19.83456939951196 16.623374135717125 34.23524775938064 29.30680870539028 52 17.659795274330072 17.54903845430272 38.067201136163845 26.723965135203358 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 765.0 1 5114.5 2 9464.0 3 76678.0 4 143892.0 5 82493.0 6 21094.0 7 19168.5 8 17243.0 9 16896.0 10 16549.0 11 15976.5 12 15404.0 13 14574.0 14 12954.5 15 12165.0 16 11720.0 17 11275.0 18 10707.0 19 10139.0 20 9688.0 21 9237.0 22 8788.0 23 8339.0 24 8540.0 25 8741.0 26 9167.0 27 9593.0 28 10130.0 29 10667.0 30 11927.0 31 13187.0 32 15427.5 33 17668.0 34 20884.0 35 24100.0 36 28138.0 37 32176.0 38 34354.0 39 41012.5 40 45493.0 41 60151.5 42 74810.0 43 103701.0 44 132592.0 45 173099.5 46 213607.0 47 236194.5 48 258782.0 49 255239.0 50 251696.0 51 232624.0 52 213552.0 53 191540.0 54 169528.0 55 165281.0 56 161034.0 57 159015.5 58 156997.0 59 157208.5 60 157420.0 61 156479.0 62 155538.0 63 155402.0 64 135686.5 65 116107.0 66 97457.5 67 78808.0 68 63026.5 69 47245.0 70 38875.5 71 30506.0 72 28719.0 73 26932.0 74 21721.5 75 16511.0 76 12859.5 77 9208.0 78 7240.0 79 5272.0 80 3896.0 81 2520.0 82 1867.0 83 1214.0 84 822.5 85 431.0 86 326.5 87 222.0 88 158.0 89 78.0 90 62.0 91 51.0 92 40.0 93 45.5 94 51.0 95 30.5 96 10.0 97 5.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2923522.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.682717344688527 #Duplication Level Percentage of deduplicated Percentage of total 1 72.06385145176048 18.507955276051863 2 11.250431496990739 5.778833042859883 3 4.43947238362664 3.420531431647009 4 2.2161429828573476 2.276662952965607 5 1.312091230640971 1.6849034103498288 6 0.8725786872380714 1.3446115071200855 7 0.6294677640961168 1.1316509864011552 8 0.5019439356246568 1.0313027377222874 9 0.3940951991686062 0.9109292046431439 >10 5.303924231284626 32.63743521404963 >50 0.8226765078807725 13.783902431608496 >100 0.17979674989906683 8.038950843160354 >500 0.007366394467906178 1.310116812755876 >1k 0.005223443349969832 2.4935801714574244 >5k 4.0180333461306404E-4 0.6959748332105344 >10k+ 5.357377794840855E-4 4.952659143996737 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 102038 3.4902422489038907 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 17849 0.6105307228746697 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 13459 0.4603693763891635 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 10635 0.3637735580577126 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCTT 8749 0.2992623281097252 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 6012 0.20564237245349956 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5472 0.18717150067623914 No Hit CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 4913 0.168050727854964 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3954 0.13524782779127367 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 3423 0.11708480387696758 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3051 0.10436042554152149 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3070269353197958 0.0 2 0.0 0.0 0.0 1.036386933294841 0.0 3 0.0 0.0 0.0 1.6715454852058578 0.0 4 0.0 0.0 0.0 2.0930576202265625 0.0 5 0.0 0.0 0.0 4.278606420611851 0.0 6 0.0 0.0 0.0 4.97478726002404 0.0 7 0.0 0.0 0.0 7.081834855355972 0.0 8 0.0 0.0 0.0 9.653219643977367 0.0 9 0.0 0.0 0.0 11.769434264561717 0.0 10 0.0 0.0 0.0 13.113327007629838 0.0 11 0.0 0.0 0.0 14.26970619684066 0.0 12 0.0 0.0 0.0 15.073633788286868 0.0 13 0.0 0.0 0.0 15.502397450746052 0.0 14 0.0 0.0 0.0 15.770430323424964 0.0 15 0.0 0.0 0.0 16.46370371079814 0.0 16 0.0 0.0 0.0 17.234075885182325 0.0 17 3.420531810603786E-5 0.0 0.0 18.2559255582821 0.0 18 3.420531810603786E-5 0.0 0.0 18.874494530911686 0.0 19 3.420531810603786E-5 0.0 0.0 19.52446398556262 0.0 20 3.420531810603786E-5 0.0 0.0 20.32415011756368 0.0 21 3.420531810603786E-5 0.0 0.0 21.088741593187944 0.0 22 6.841063621207572E-5 0.0 0.0 21.755198011165984 0.0 23 6.841063621207572E-5 0.0 0.0 22.398600044740554 0.0 24 1.3682127242415143E-4 0.0 0.0 22.892148579692577 0.0 25 1.3682127242415143E-4 0.0 0.0 23.41891047852556 0.0 26 1.3682127242415143E-4 0.0 0.0 23.8978533426463 0.0 27 1.3682127242415143E-4 0.0 0.0 24.409564901512628 0.0 28 1.3682127242415143E-4 0.0 0.0 24.910672811766084 0.0 29 1.3682127242415143E-4 0.0 0.0 25.420674104727105 0.0 30 1.3682127242415143E-4 0.0 0.0 25.955611074587434 0.0 31 1.3682127242415143E-4 0.0 0.0 26.46232865701028 0.0 32 1.3682127242415143E-4 0.0 0.0 27.03232607792929 0.0 33 1.3682127242415143E-4 0.0 0.0 27.56042198416841 0.0 34 1.3682127242415143E-4 0.0 0.0 28.114240289623268 0.0 35 1.3682127242415143E-4 0.0 0.0 28.616271743465585 0.0 36 1.3682127242415143E-4 0.0 0.0 29.17118461909984 0.0 37 1.3682127242415143E-4 0.0 0.0 29.900544617074885 0.0 38 1.7102659053018927E-4 0.0 0.0 30.789985503786188 0.0 39 1.7102659053018927E-4 0.0 0.0 31.65421707105334 0.0 40 1.7102659053018927E-4 0.0 0.0 32.437279418454864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAA 30 1.862396E-6 46.0 11 CGTTTTT 27250 0.0 45.307888 1 ACGTAGG 225 0.0 43.955555 1 AATGCGG 415 0.0 42.6747 1 ATTACGG 205 0.0 42.634148 1 CACGACG 425 0.0 42.211765 25 GTACCGG 180 0.0 42.166668 1 ATAACGG 170 0.0 41.941177 1 TAGTAGG 565 0.0 41.929203 1 ACGGGTA 220 0.0 41.81818 4 GTTACGG 220 0.0 41.81818 1 CTAACGG 260 0.0 41.576923 1 ATAGCGG 460 0.0 41.5 1 GCACTTA 4665 0.0 41.21758 35 TAGCATA 1885 0.0 40.99735 29 CGCACTT 4695 0.0 40.954205 34 CACTTAC 4695 0.0 40.954205 36 ACCCGCA 4730 0.0 40.942917 31 ATACCGG 90 0.0 40.88889 1 GCGCGAC 2050 0.0 40.839027 8 >>END_MODULE