##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043355_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2878763 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39795460758666 33.0 31.0 34.0 31.0 34.0 2 32.68100604322065 34.0 31.0 34.0 31.0 34.0 3 32.7873694361085 34.0 31.0 34.0 31.0 34.0 4 36.23821690080079 37.0 37.0 37.0 35.0 37.0 5 36.2255975917434 37.0 37.0 37.0 35.0 37.0 6 36.36694198167755 37.0 37.0 37.0 35.0 37.0 7 36.32563778261705 37.0 37.0 37.0 35.0 37.0 8 36.23312061465289 37.0 37.0 37.0 35.0 37.0 9 37.85880185343496 39.0 38.0 39.0 35.0 39.0 10 37.6126933686448 39.0 37.0 39.0 35.0 39.0 11 37.23768438040923 39.0 35.0 39.0 35.0 39.0 12 37.23165852833318 39.0 37.0 39.0 35.0 39.0 13 37.18533550695212 39.0 37.0 39.0 34.0 39.0 14 38.39770658439059 40.0 36.0 41.0 34.0 41.0 15 38.521113756151514 40.0 37.0 41.0 35.0 41.0 16 38.43242635812674 40.0 37.0 41.0 34.0 41.0 17 38.345431353675174 40.0 36.0 41.0 34.0 41.0 18 38.24478187332545 40.0 36.0 41.0 34.0 41.0 19 38.08716070062037 40.0 36.0 41.0 34.0 41.0 20 37.78508130054471 40.0 35.0 41.0 34.0 41.0 21 37.77527361578567 40.0 35.0 41.0 34.0 41.0 22 37.76780895127525 39.0 35.0 41.0 34.0 41.0 23 37.74456459250032 39.0 35.0 41.0 34.0 41.0 24 37.68617006679605 39.0 35.0 41.0 34.0 41.0 25 37.6405487356896 39.0 35.0 41.0 34.0 41.0 26 37.61834927015527 39.0 35.0 41.0 34.0 41.0 27 37.59869916349488 39.0 35.0 41.0 34.0 41.0 28 37.53535945821174 39.0 35.0 41.0 34.0 41.0 29 37.48330307149286 39.0 35.0 41.0 34.0 41.0 30 37.38309892130752 39.0 35.0 41.0 34.0 41.0 31 37.28969491410026 39.0 35.0 41.0 33.0 41.0 32 37.06522315313904 39.0 35.0 41.0 33.0 41.0 33 36.612336618193304 39.0 35.0 41.0 32.0 41.0 34 36.434506070836676 39.0 35.0 41.0 31.0 41.0 35 36.3216624640514 39.0 35.0 41.0 31.0 41.0 36 36.264662634610765 39.0 35.0 41.0 31.0 41.0 37 36.165701032005764 38.0 35.0 41.0 31.0 41.0 38 36.08237670138181 38.0 35.0 41.0 31.0 41.0 39 35.99965679703401 38.0 35.0 41.0 31.0 41.0 40 35.890856246241874 38.0 35.0 41.0 31.0 41.0 41 35.81075204870981 38.0 35.0 41.0 31.0 41.0 42 35.695013448484644 37.0 35.0 40.0 30.0 41.0 43 35.58021136161608 37.0 35.0 40.0 30.0 41.0 44 35.46524079960733 37.0 35.0 40.0 30.0 41.0 45 35.39371042353955 37.0 35.0 40.0 30.0 41.0 46 35.31580717134408 37.0 35.0 40.0 29.0 41.0 47 35.17934334990411 36.0 35.0 40.0 29.0 41.0 48 35.119071976400974 36.0 35.0 40.0 29.0 41.0 49 35.05519106644069 36.0 35.0 40.0 29.0 41.0 50 34.99415165472114 36.0 35.0 40.0 29.0 41.0 51 34.58976928632194 35.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 6.0 14 24.0 15 58.0 16 103.0 17 237.0 18 490.0 19 933.0 20 1751.0 21 2940.0 22 4563.0 23 7066.0 24 11598.0 25 20589.0 26 32563.0 27 41310.0 28 44600.0 29 44685.0 30 47583.0 31 54570.0 32 63935.0 33 86604.0 34 224786.0 35 318874.0 36 244474.0 37 277230.0 38 409318.0 39 937311.0 40 559.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.411313123032357 18.255167236761068 24.44136596169952 27.892153678507054 2 33.864718978255596 20.130382389936234 25.170116470164444 20.834782161643734 3 27.01003868675539 21.25645633211209 32.4498056977945 19.283699283338017 4 24.49729276081428 23.678677265200363 30.21950747595408 21.604522498031272 5 23.266729494578055 31.246128979704128 27.14051139326162 18.3466301324562 6 80.04222647018877 2.037298659181044 15.197534496587597 2.722940374042601 7 80.02982531038505 1.9464957691897526 13.756950467961412 4.266728452463784 8 70.89090001504118 3.3156254960898135 18.977942956749132 6.815531532119873 9 46.60592066800914 14.016263235285434 22.90699164884362 16.470824447861805 10 31.399806097271643 14.883406518702651 31.80418117087096 21.91260621315475 11 27.56694455222608 12.12864692230656 36.82713721136474 23.47727131410262 12 23.458686942968214 13.761570507888285 39.3424884229789 23.437254126164607 13 18.29261387616834 16.869051047272734 43.659168886080586 21.17916619047834 14 18.634948413606818 16.3533086954362 43.54741949927799 21.464323391678995 15 23.806440474606628 15.107461086584758 40.18708730103867 20.89901113776994 16 22.98591443616581 17.83984996333495 36.38903237258503 22.78520322791421 17 22.710101526245822 19.109700937520735 37.307239255193984 20.872958281039462 18 24.01976126551578 24.521330863290935 32.767963184187096 18.69094468700619 19 24.807981761610804 21.116396174329044 30.99855736647998 23.077064697580177 20 22.793887513491036 25.002926604239388 33.9579882053507 18.24519767691887 21 21.535812430547427 19.37214004765241 34.7194611018691 24.37258641993106 22 23.560501507070917 19.9718420724457 32.151170485378614 24.316485935104765 23 23.642099054350773 18.736207183432608 34.23748325235527 23.384210509861354 24 26.551751568295135 16.53751976109183 31.42981898822515 25.480909682387885 25 18.52552641533881 18.416625474205414 35.08395793609964 27.973890174356136 26 17.90407893946115 19.20053856465433 35.39350061120002 27.501881884684497 27 21.28636501163868 21.62220370346569 33.56493744014356 23.526493844752068 28 24.24093265058638 22.359534286080514 30.57302737321551 22.826505690117596 29 23.12673881107962 18.071720388236198 35.53522815181382 23.266312648870365 30 26.436493730119498 20.151641521028303 30.19612937918127 23.21573536967093 31 28.536597142592147 17.59589101291075 31.98252165947666 21.884990185020442 32 28.267766398275928 19.346052453779627 29.981141205441364 22.405039942503084 33 19.8515126114932 21.16047760791701 36.40438618948486 22.583623591104928 34 21.404436558341207 23.59350179226286 34.551437544528675 20.450624104867266 35 24.6315170786897 24.15964773758729 29.294526850595204 21.914308333127806 36 25.107103294018994 23.865354667959814 28.82168486950819 22.205857168513006 37 22.56274656857824 25.279399519863222 29.74767287199398 22.410181039564563 38 21.54147458474352 21.86334894536299 28.81546692103518 27.77970954885831 39 22.605369042189302 19.764113961448025 32.87373778251283 24.75677921384984 40 18.568496260372942 20.989605604907386 34.53827216759421 25.903625967125464 41 20.361245437710572 23.191454107198126 29.527474126907983 26.919826328183323 42 19.79211209814771 18.382860971882714 32.10656799465604 29.718458935313535 43 22.195957082955424 18.76271162301308 33.55597525742828 25.485356036603225 44 23.4205802978571 19.600224124042168 32.41979280684099 24.559402771259737 45 21.98767317768083 21.200077950147335 31.986690116553536 24.8255587556183 46 22.219196231159007 20.562477703096782 31.96567414545762 25.252651920286596 47 20.634592010526745 20.434089225128986 34.28962370295853 24.64169506138574 48 22.897577883278338 19.174902553631544 31.001023703583797 26.92649585950632 49 21.039731301256825 18.32356466996415 34.72237902182292 25.914325006956112 50 20.615625530826957 17.790523221258574 35.954922305170655 25.63892894274381 51 19.849358908670148 16.657501850621255 34.01353289590008 29.479606344808516 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 675.0 1 5164.5 2 9654.0 3 73173.0 4 136692.0 5 79284.5 6 21877.0 7 19523.0 8 17169.0 9 16590.0 10 16011.0 11 15431.0 12 14851.0 13 14023.0 14 13195.0 15 12540.0 16 11885.0 17 11208.0 18 10531.0 19 10072.0 20 9613.0 21 8944.0 22 8275.0 23 8232.5 24 8190.0 25 8122.0 26 8898.0 27 9742.0 28 10112.5 29 10483.0 30 12308.5 31 14134.0 32 16356.0 33 18578.0 34 22734.0 35 26890.0 36 29943.0 37 32996.0 38 36298.0 39 39600.0 40 48268.5 41 56937.0 42 72287.5 43 87638.0 44 120372.0 45 153106.0 46 197628.5 47 242151.0 48 268705.0 49 295259.0 50 266272.5 51 237286.0 52 210603.5 53 183921.0 54 170479.5 55 157038.0 56 157631.5 57 158225.0 58 159093.0 59 159961.0 60 158625.0 61 157289.0 62 155278.5 63 153268.0 64 147446.5 65 141625.0 66 117891.5 67 94158.0 68 75344.5 69 56531.0 70 45975.5 71 35420.0 72 31595.5 73 27771.0 74 23537.0 75 14925.5 76 10548.0 77 8353.0 78 6158.0 79 4789.0 80 3420.0 81 2422.5 82 1425.0 83 1057.5 84 690.0 85 461.5 86 233.0 87 179.5 88 126.0 89 103.5 90 81.0 91 68.0 92 55.0 93 46.5 94 38.0 95 22.5 96 7.0 97 3.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2878763.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.3517424362113 #Duplication Level Percentage of deduplicated Percentage of total 1 71.18859554986017 18.04754938775673 2 11.63024502740713 5.896939528097056 3 4.584563398755299 3.486800114031775 4 2.300619973305492 2.332989000273766 5 1.3647433342954545 1.7299310751297288 6 0.8802898613337412 1.33901291002447 7 0.6455217918307622 1.1455571542418563 8 0.4956464014168301 1.0052399926523576 9 0.41284680643744714 0.9419747312173089 >10 5.500174582006519 33.326620619739444 >50 0.7984249825202788 13.195868817025527 >100 0.18476806691299497 8.288456020511607 >500 0.007056851222601138 1.2375910949218298 >1k 0.005534785272628342 2.5445335955880037 >5k 4.1510889544712565E-4 0.7085980758906169 >10k+ 5.534785272628342E-4 4.772337882897968 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 97221 3.3771797122583553 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 17051 0.5923030134818323 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 11331 0.3936065594840562 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 10442 0.3627252399728634 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 8780 0.3049921094581249 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 6304 0.21898294510524136 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 5116 0.1777152200441648 No Hit CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 4852 0.16854461447503669 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3794 0.13179271791390954 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC 3239 0.1125136039333561 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3086 0.10719882116033866 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3111753207888249 0.0 2 0.0 0.0 0.0 1.0583365146766164 0.0 3 0.0 0.0 0.0 1.6957283388733286 0.0 4 0.0 0.0 0.0 2.126086794918512 0.0 5 0.0 0.0 0.0 4.379519953535598 0.0 6 0.0 0.0 0.0 5.09833563930063 0.0 7 0.0 0.0 0.0 7.28139134760312 0.0 8 0.0 0.0 0.0 9.96827456793074 0.0 9 0.0 0.0 3.473714230730352E-5 12.1678304188292 0.0 10 0.0 0.0 3.473714230730352E-5 13.560616139640533 0.0 11 0.0 0.0 3.473714230730352E-5 14.744110578050364 0.0 12 0.0 0.0 3.473714230730352E-5 15.56772822215653 0.0 13 0.0 0.0 3.473714230730352E-5 16.018581592163024 0.0 14 0.0 0.0 3.473714230730352E-5 16.2967218906176 0.0 15 0.0 0.0 3.473714230730352E-5 17.02085235915565 0.0 16 0.0 0.0 3.473714230730352E-5 17.805981249585326 0.0 17 0.0 0.0 3.473714230730352E-5 18.84472601600062 0.0 18 0.0 0.0 3.473714230730352E-5 19.475170411735874 0.0 19 0.0 0.0 3.473714230730352E-5 20.148654126789875 0.0 20 0.0 0.0 3.473714230730352E-5 20.970152805215296 0.0 21 0.0 0.0 3.473714230730352E-5 21.753405889960376 0.0 22 1.0421142692191055E-4 0.0 3.473714230730352E-5 22.433975982045066 0.0 23 1.3894856922921407E-4 0.0 3.473714230730352E-5 23.093425891606916 0.0 24 1.736857115365176E-4 0.0 3.473714230730352E-5 23.601352386424306 0.0 25 1.736857115365176E-4 0.0 3.473714230730352E-5 24.140403360749044 0.0 26 1.736857115365176E-4 0.0 3.473714230730352E-5 24.6362760671858 0.0 27 1.736857115365176E-4 0.0 3.473714230730352E-5 25.1537552761377 0.0 28 1.736857115365176E-4 0.0 3.473714230730352E-5 25.662584936655083 0.0 29 1.736857115365176E-4 0.0 3.473714230730352E-5 26.187567368345363 0.0 30 2.4315999615112462E-4 0.0 3.473714230730352E-5 26.727313085516244 0.0 31 2.4315999615112462E-4 0.0 3.473714230730352E-5 27.241318580237415 0.0 32 3.126342807657317E-4 0.0 3.473714230730352E-5 27.81465511401946 0.0 33 3.126342807657317E-4 0.0 3.473714230730352E-5 28.341235454255873 0.0 34 3.126342807657317E-4 0.0 3.473714230730352E-5 28.907277188153383 0.0 35 3.126342807657317E-4 0.0 3.473714230730352E-5 29.414543677266938 0.0 36 3.126342807657317E-4 0.0 3.473714230730352E-5 29.974610622687592 0.0 37 3.126342807657317E-4 0.0 3.473714230730352E-5 30.710551719610123 0.0 38 3.126342807657317E-4 0.0 3.473714230730352E-5 31.61163319106158 0.0 39 3.126342807657317E-4 0.0 3.473714230730352E-5 32.4849944229518 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTCG 45 3.8562575E-10 45.0 26 CGTTTTT 26470 0.0 44.430485 1 TATACGG 175 0.0 43.714287 1 GTTACGG 205 0.0 42.80488 1 AGGGTAC 1050 0.0 42.428574 5 CATACCA 85 0.0 42.35294 18 GTACCGG 75 0.0 42.0 1 TACCGGT 145 0.0 41.896553 40 CGCACTT 4370 0.0 41.39588 34 GCACTTA 4370 0.0 41.292908 35 CCGCACT 4385 0.0 41.202965 33 AATGCGG 400 0.0 41.0625 1 CACTTAC 4390 0.0 41.053528 36 CCCGCAC 4460 0.0 40.913677 32 ACTTACT 4385 0.0 40.895096 37 ACCCGCA 4465 0.0 40.81747 31 TAGCATA 1970 0.0 40.54569 29 ACGGGAT 390 0.0 40.384617 4 CTTACTG 4435 0.0 40.33258 38 ACGTAGG 190 0.0 40.263157 1 >>END_MODULE