##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043354_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2418239 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.342004243583865 33.0 31.0 34.0 31.0 34.0 2 32.66682904377938 34.0 31.0 34.0 31.0 34.0 3 32.782717919940914 34.0 31.0 34.0 31.0 34.0 4 36.202934449407195 37.0 37.0 37.0 35.0 37.0 5 36.1593146913932 37.0 37.0 37.0 35.0 37.0 6 36.299223112355726 37.0 37.0 37.0 35.0 37.0 7 36.2464843218557 37.0 37.0 37.0 35.0 37.0 8 36.2358261528327 37.0 37.0 37.0 35.0 37.0 9 37.82448674427962 39.0 38.0 39.0 35.0 39.0 10 37.647789155662444 39.0 37.0 39.0 35.0 39.0 11 37.362791270837995 39.0 37.0 39.0 35.0 39.0 12 37.37789440994046 39.0 37.0 39.0 35.0 39.0 13 37.36425349190051 39.0 37.0 39.0 35.0 39.0 14 38.712464318043004 40.0 38.0 41.0 35.0 41.0 15 38.75912182377341 41.0 38.0 41.0 35.0 41.0 16 38.607468079044295 41.0 38.0 41.0 34.0 41.0 17 38.60154972275279 40.0 38.0 41.0 34.0 41.0 18 38.37934257118506 40.0 38.0 41.0 34.0 41.0 19 38.11109158358624 40.0 37.0 41.0 34.0 41.0 20 37.79285463512912 40.0 35.0 41.0 34.0 41.0 21 37.73225847403834 40.0 35.0 41.0 34.0 41.0 22 37.6829093402265 39.0 35.0 41.0 34.0 41.0 23 37.702594739395074 39.0 35.0 41.0 34.0 41.0 24 37.61297539242399 39.0 35.0 41.0 34.0 41.0 25 37.505237075409006 39.0 35.0 41.0 34.0 41.0 26 37.41402566082178 39.0 35.0 41.0 34.0 41.0 27 37.44475628752989 39.0 35.0 41.0 34.0 41.0 28 37.4022877804882 39.0 35.0 41.0 33.0 41.0 29 37.31604733857985 39.0 35.0 41.0 33.0 41.0 30 37.24226224124249 39.0 35.0 41.0 33.0 41.0 31 37.1265784730128 39.0 35.0 41.0 33.0 41.0 32 36.84569391197479 39.0 35.0 41.0 32.0 41.0 33 36.453477096349864 39.0 35.0 41.0 31.0 41.0 34 36.20736535966875 39.0 35.0 41.0 30.0 41.0 35 36.02739141995477 39.0 35.0 41.0 30.0 41.0 36 35.967975042996166 39.0 35.0 41.0 30.0 41.0 37 35.90074595604487 39.0 35.0 41.0 30.0 41.0 38 35.765083186566756 38.0 35.0 41.0 29.0 41.0 39 35.73111880173961 38.0 35.0 41.0 29.0 41.0 40 35.62471658095002 38.0 35.0 41.0 28.0 41.0 41 35.57313028199446 38.0 35.0 41.0 28.0 41.0 42 35.4684975306411 38.0 35.0 41.0 28.0 41.0 43 35.34826044902923 38.0 35.0 40.0 28.0 41.0 44 35.159813401404904 37.0 35.0 40.0 27.0 41.0 45 35.05851448099216 37.0 35.0 40.0 26.0 41.0 46 35.0122308010085 37.0 35.0 40.0 26.0 41.0 47 34.90484480648935 37.0 35.0 40.0 26.0 41.0 48 34.79788929051264 36.0 35.0 40.0 25.0 41.0 49 34.726477407733476 36.0 35.0 40.0 26.0 41.0 50 34.58732780341397 36.0 35.0 40.0 26.0 41.0 51 34.398482945647636 35.0 34.0 40.0 24.0 41.0 52 33.93634541499 35.0 34.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 3.0 12 3.0 13 9.0 14 24.0 15 35.0 16 116.0 17 211.0 18 498.0 19 1008.0 20 1825.0 21 2934.0 22 4619.0 23 7408.0 24 12744.0 25 23370.0 26 35169.0 27 43268.0 28 45647.0 29 44032.0 30 44928.0 31 50200.0 32 57551.0 33 73418.0 34 161008.0 35 222033.0 36 230774.0 37 220307.0 38 340537.0 39 792634.0 40 1923.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.535873005108265 16.613328955491994 21.54501684903767 32.305781190362076 2 37.38203709393488 19.105431679829827 22.24378979910588 21.268741427129413 3 25.764574965501758 20.30882803560773 34.58963320002696 19.336963798863554 4 22.347460279980595 22.73232711903166 32.96940459565825 21.9508080053295 5 20.77491099928502 31.104659216892955 29.780058960259925 18.340370823562104 6 76.30771813704105 1.960807017007004 18.756872252908003 2.9746025930439464 7 75.9328585801486 1.859700385280363 17.43537342669604 4.772067607874987 8 66.83656991720008 3.44957632392828 22.447119577510744 7.266734181360899 9 38.360683125199785 17.64850372523146 26.840440502365563 17.15037264720319 10 26.39317288324272 15.948961206894769 37.50154554615983 20.15632036370268 11 23.996097987006245 12.759615571496449 41.24927271456626 21.99501372693104 12 20.3393874633566 13.91082519138927 43.32565970526486 22.424127639989262 13 16.418848591888562 17.57659189186842 44.19492862368029 21.80963089256273 14 17.036240007708088 17.968819459118805 43.14631432211622 21.84862621105689 15 20.368499556908972 14.326210105783588 43.548507819119614 21.756782518187823 16 18.761875893987316 18.72536171983001 40.43165295076293 22.08110943541974 17 19.439931288842832 20.474072248441942 39.23421134139347 20.851785121321758 18 20.059721144187982 25.945243625630056 35.665333327268314 18.32970190291365 19 21.184630634110192 21.15555989296343 34.89324256204618 22.76656691088019 20 20.890780439815913 25.13361996064078 35.38529483644916 18.59030476309414 21 18.20328759895114 19.937442080786887 36.53861342902832 25.32065689123366 22 19.481862628135598 22.17766730252882 34.69173228948834 23.648737779847238 23 20.45930943963769 20.211525825197594 37.5411611507382 21.78800358442652 24 23.15895988775303 18.585921408099036 34.58376115842975 23.671357545718188 25 18.116488899567 19.045098520038756 37.24954398634709 25.588868594047153 26 17.949756000130673 18.390696701194546 37.39841264655809 26.261134652116684 27 21.517641556521088 20.814981480325145 36.44160068545747 21.22577627769629 28 22.5932176265456 22.060970813885643 32.64429198271966 22.701519576849105 29 23.32862880798796 18.842099560878804 35.511130206733085 22.318141424400153 30 25.111909947693338 21.37199838394799 30.88545011473225 22.630641553626422 31 26.155851427423016 20.114802548466056 29.47665636026877 24.25268966384216 32 24.864829324148687 23.2038272478444 28.484405387556812 23.446938040450096 33 20.332812430863946 23.37386833972986 31.46686493766745 24.826454291738738 34 19.16497914391423 27.48289147598728 29.56639108045152 23.785738299646976 35 20.38020228769778 28.795044658530443 28.045532306773644 22.779220746998124 36 20.686913080138066 29.203275606753508 26.404255327947318 23.7055559851611 37 19.47015989734679 31.192781193256746 28.06132892571826 21.275729983678204 38 18.33995729950596 28.864268585528563 26.98575285569375 25.810021259271725 39 20.700187202340214 25.66181423755055 32.12598093075167 21.512017629357562 40 17.67786393321752 24.388945840340842 34.73866726986042 23.194522956581213 41 19.739364057895024 26.12843478250082 29.77952137898694 24.35267978061722 42 18.872080054949077 21.077858722814412 32.28742072226939 27.762640499967123 43 21.710385119088727 21.136124262324774 33.46422748123738 23.68926313734912 44 22.19280228298361 21.779733103303688 33.05091018712377 22.976554426588937 45 22.10348108685701 22.493268862176155 32.06932813506027 23.333921915906576 46 21.892542465819133 21.93604519652524 31.44577521080423 24.7256371268514 47 19.141449625119765 23.467283424012265 33.6291822272323 23.76208472363567 48 21.084929984174433 21.20849097214957 30.689811883771622 27.016767159904376 49 20.12600905038749 18.60759006864086 35.185107840870984 26.081293040100668 50 19.3449861655527 18.809679274877297 36.83267038535066 25.01266417421934 51 18.4317182875638 17.97006003128723 35.260865447956135 28.337356233192835 52 15.872252494480488 19.47206210800504 38.765853995407404 25.88983140210707 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 708.0 1 3786.5 2 6865.0 3 87517.5 4 168170.0 5 95620.5 6 23071.0 7 20829.0 8 18587.0 9 17886.0 10 17185.0 11 16846.0 12 16507.0 13 15635.5 14 13932.5 15 13101.0 16 12224.0 17 11347.0 18 10600.5 19 9854.0 20 9505.0 21 9156.0 22 8721.0 23 8286.0 24 8332.0 25 8378.0 26 9439.0 27 10500.0 28 10930.5 29 11361.0 30 12859.0 31 14357.0 32 16196.0 33 18035.0 34 21664.0 35 25293.0 36 26870.0 37 28447.0 38 31215.0 39 38788.0 40 43593.0 41 54231.5 42 64870.0 43 87479.0 44 110088.0 45 146870.5 46 183653.0 47 205431.5 48 227210.0 49 227302.0 50 227394.0 51 204998.0 52 182602.0 53 156775.0 54 130948.0 55 124902.5 56 118857.0 57 114013.5 58 109170.0 59 108367.0 60 107564.0 61 105702.0 62 103840.0 63 106012.5 64 91066.5 65 73948.0 66 61941.5 67 49935.0 68 41273.5 69 32612.0 70 28118.0 71 23624.0 72 23662.0 73 23700.0 74 18830.5 75 13961.0 76 10361.5 77 6762.0 78 5402.0 79 4042.0 80 3008.0 81 1974.0 82 1491.5 83 1009.0 84 714.0 85 419.0 86 318.5 87 218.0 88 131.5 89 35.5 90 26.0 91 25.5 92 25.0 93 16.5 94 8.0 95 5.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2418239.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.76809832531568 #Duplication Level Percentage of deduplicated Percentage of total 1 74.27827162160516 22.85401164688053 2 9.843154302891234 6.057102788452233 3 3.671998849632889 3.389412649678524 4 1.9229811440925795 2.3666589167667413 5 1.3712066400529743 2.109471036273783 6 0.981386718023884 1.8117241821190633 7 0.8262958950560553 1.7796487341422609 8 0.6795076725754169 1.6725727106085473 9 0.6061460097028212 1.6784964023430735 >10 5.435808740916242 31.622780895280933 >50 0.2335162671156447 4.940242075715931 >100 0.1377224789304765 7.452104224377841 >500 0.00687850145659446 1.4860336140324952 >1k 0.004046177327408506 2.6533231847982046 >5k 6.743628879014176E-4 1.4588111049343295 >10k+ 4.046177327408506E-4 6.667605833595563 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 126136 5.216027034548695 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 19977 0.826097006954234 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA 14561 0.6021323781479002 No Hit CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 9792 0.40492275577393305 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCTT 6985 0.28884655321496344 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 6777 0.28024525284721646 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 5883 0.24327620222815033 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 5717 0.23641170289619845 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 4981 0.20597633236417076 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 4759 0.1967960983178255 No Hit GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 4070 0.16830429084966372 No Hit AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 3419 0.14138387479484038 No Hit GGGCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 3401 0.14063953149378536 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG 3160 0.13067360174077086 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTT 3105 0.12839921943199165 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTCC 2780 0.11495968760738702 No Hit CGTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 2756 0.113967229872647 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGAA 2532 0.10470429101507336 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.29864707334552126 0.0 2 0.0 0.0 0.0 0.9980403094979445 0.0 3 0.0 0.0 0.0 1.6872608538692826 0.0 4 0.0 0.0 0.0 2.1354795783212497 0.0 5 0.0 0.0 0.0 4.422350313595968 0.0 6 0.0 0.0 0.0 5.442472807691878 0.0 7 0.0 0.0 0.0 8.038907651394258 0.0 8 0.0 0.0 0.0 11.003668371902032 0.0 9 0.0 0.0 0.0 13.931005165328985 0.0 10 4.1352405614168E-5 0.0 0.0 15.54606471899593 0.0 11 4.1352405614168E-5 0.0 0.0 16.790565365954315 0.0 12 4.1352405614168E-5 0.0 0.0 17.64474065632057 0.0 13 4.1352405614168E-5 0.0 0.0 18.116943776028755 0.0 14 4.1352405614168E-5 0.0 0.0 18.412696180981285 0.0 15 8.2704811228336E-5 0.0 0.0 19.08810502187749 0.0 16 8.2704811228336E-5 0.0 0.0 19.817106580449657 0.0 17 1.2405721684250398E-4 0.0 0.0 20.786903196913126 0.0 18 1.2405721684250398E-4 0.0 0.0 21.316420750802546 0.0 19 1.65409622456672E-4 0.0 0.0 21.893989800015632 0.0 20 1.65409622456672E-4 0.0 0.0 22.534952087035236 0.0 21 1.65409622456672E-4 0.0 0.0 23.207714373972134 0.0 22 2.0676202807084E-4 0.0 0.0 23.845244411325762 0.0 23 2.0676202807084E-4 0.0 0.0 24.433027504725548 0.0 24 2.4811443368500795E-4 0.0 0.0 24.901839727173368 0.0 25 2.4811443368500795E-4 0.0 0.0 25.354152339781137 0.0 26 2.4811443368500795E-4 0.0 0.0 25.82552841137704 0.0 27 2.8946683929917594E-4 0.0 0.0 26.339910984811674 0.0 28 3.30819244913344E-4 0.0 0.0 26.813850905555654 0.0 29 3.30819244913344E-4 0.0 0.0 27.31413230867586 0.0 30 3.72171650527512E-4 0.0 0.0 27.7666516833117 0.0 31 3.72171650527512E-4 0.0 0.0 28.23099784595319 0.0 32 3.72171650527512E-4 0.0 0.0 28.762004086444723 0.0 33 3.72171650527512E-4 0.0 0.0 29.252857141084895 0.0 34 3.72171650527512E-4 0.0 0.0 29.823727100588485 0.0 35 3.72171650527512E-4 0.0 0.0 30.292828789875607 0.0 36 3.72171650527512E-4 0.0 0.0 30.789347124084923 0.0 37 3.72171650527512E-4 0.0 0.0 31.412900048340962 0.0 38 3.72171650527512E-4 0.0 0.0 32.03107715986716 0.0 39 3.72171650527512E-4 0.0 0.0 32.7348951034203 0.0 40 4.1352405614168E-4 0.0 0.0 33.36994399643708 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 31825 0.0 45.31343 1 CACTTAC 5245 0.0 42.141087 36 CGGTCTA 595 0.0 42.134453 30 CTTACTG 5185 0.0 41.963356 38 TCACGAC 620 0.0 41.919353 24 CGACGGT 600 0.0 41.783333 27 ACGGGTA 215 0.0 41.72093 4 ACTTACT 5265 0.0 41.63153 37 GCACTTA 5305 0.0 41.577755 35 TCGGCGT 2165 0.0 41.53811 4 ACCCGCA 5405 0.0 41.531914 31 CCGCACT 5330 0.0 41.46904 33 CACGACG 605 0.0 41.43802 25 ACTACGG 100 0.0 41.399998 1 CGCACTT 5335 0.0 41.343956 34 TACGGGA 390 0.0 41.28205 3 CCCGCAC 5490 0.0 40.930786 32 TCGACGT 45 1.5896148E-8 40.88889 25 GTTTTTT 35905 0.0 40.67679 2 TTACTGG 5235 0.0 40.508118 39 >>END_MODULE