##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043348_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 756131 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15743700496343 33.0 31.0 34.0 30.0 34.0 2 32.47742785311011 34.0 31.0 34.0 31.0 34.0 3 32.54885198464287 34.0 31.0 34.0 31.0 34.0 4 36.0878207612173 37.0 35.0 37.0 35.0 37.0 5 35.97667996683114 37.0 35.0 37.0 35.0 37.0 6 36.25270488843864 37.0 36.0 37.0 35.0 37.0 7 36.17457953714369 37.0 37.0 37.0 35.0 37.0 8 36.13800121936543 37.0 36.0 37.0 35.0 37.0 9 37.68062280213349 39.0 38.0 39.0 35.0 39.0 10 37.53411908783002 39.0 37.0 39.0 35.0 39.0 11 37.26245055420291 39.0 37.0 39.0 34.0 39.0 12 37.24815408970139 39.0 37.0 39.0 34.0 39.0 13 37.25550995793057 39.0 37.0 39.0 34.0 39.0 14 38.653184434972246 40.0 38.0 41.0 34.0 41.0 15 38.75956018203195 40.0 38.0 41.0 35.0 41.0 16 38.78486003086767 40.0 38.0 41.0 35.0 41.0 17 38.771912538964806 40.0 38.0 41.0 35.0 41.0 18 38.50562402546649 40.0 38.0 41.0 35.0 41.0 19 38.245103031088526 40.0 37.0 41.0 34.0 41.0 20 37.94382719396507 40.0 35.0 41.0 34.0 41.0 21 37.851847100568556 40.0 35.0 41.0 34.0 41.0 22 37.80630737266426 40.0 35.0 41.0 34.0 41.0 23 37.804141081373466 40.0 35.0 41.0 34.0 41.0 24 37.71616690758612 40.0 35.0 41.0 34.0 41.0 25 37.59886845004371 39.0 35.0 41.0 34.0 41.0 26 37.583261366086035 39.0 35.0 41.0 34.0 41.0 27 37.605551154495714 40.0 35.0 41.0 34.0 41.0 28 37.60074907654891 40.0 35.0 41.0 33.0 41.0 29 37.56355975353477 40.0 35.0 41.0 33.0 41.0 30 37.54253297378364 40.0 35.0 41.0 33.0 41.0 31 37.42540908916577 40.0 35.0 41.0 33.0 41.0 32 37.27344997097064 40.0 35.0 41.0 33.0 41.0 33 37.12013262252176 40.0 35.0 41.0 33.0 41.0 34 36.933478458097866 40.0 35.0 41.0 32.0 41.0 35 36.802706144834694 40.0 35.0 41.0 32.0 41.0 36 36.75136318971184 40.0 35.0 41.0 32.0 41.0 37 36.68971514195292 40.0 35.0 41.0 31.0 41.0 38 36.62571300475711 40.0 35.0 41.0 31.0 41.0 39 36.61949318305955 40.0 35.0 41.0 31.0 41.0 40 36.59692301995289 40.0 35.0 41.0 31.0 41.0 41 36.583426681355476 40.0 35.0 41.0 31.0 41.0 42 36.51432225368355 40.0 35.0 41.0 31.0 41.0 43 36.40459920304815 39.0 35.0 41.0 31.0 41.0 44 36.249496449689275 39.0 35.0 41.0 31.0 41.0 45 36.17829450187864 39.0 35.0 41.0 30.0 41.0 46 36.15817893989269 39.0 35.0 41.0 30.0 41.0 47 36.07602518611193 39.0 35.0 41.0 30.0 41.0 48 36.06861773951868 39.0 35.0 41.0 30.0 41.0 49 36.037103359074024 39.0 35.0 41.0 30.0 41.0 50 35.91288943318023 39.0 35.0 41.0 30.0 41.0 51 35.83264143382562 39.0 35.0 41.0 29.0 41.0 52 35.527653277011524 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 4.0 15 8.0 16 23.0 17 36.0 18 126.0 19 237.0 20 432.0 21 774.0 22 1247.0 23 2095.0 24 3793.0 25 6872.0 26 9475.0 27 10311.0 28 9724.0 29 9859.0 30 11213.0 31 13546.0 32 17125.0 33 22497.0 34 38536.0 35 70951.0 36 74864.0 37 58104.0 38 91347.0 39 301204.0 40 1726.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.66971728443881 20.079853887752254 25.41847907307067 27.831949754738268 2 33.130767023174556 19.988996615665805 26.920731989562658 19.959504371596985 3 20.96898553293014 22.052924691620895 37.96392424064084 19.01416553480812 4 22.18451564609836 24.142377445178152 35.98331506048555 17.689791848237938 5 19.788370004668504 28.85174658888473 31.257678894265677 20.10220451218109 6 71.23196906356173 1.4902179648764566 22.627296063777308 4.650516907784498 7 71.67250119357624 1.5087332750541904 18.025844727963804 8.792920803405758 8 57.5771923119142 3.4803493045517246 28.152132368597506 10.790326014936564 9 30.541533147034045 19.942047079143695 29.90606125129111 19.61035852253115 10 24.097014935242704 19.436579111291564 44.58288312474954 11.883522828716188 11 21.670319032019584 15.62850881659395 40.59600783462125 22.105164316765215 12 16.485370921176358 19.84735449280614 45.14455828421266 18.522716301804845 13 11.856675628958474 23.906836249274267 43.13128280681522 21.105205314952038 14 10.052887661000542 22.98292227140535 45.95301607790184 21.01117398969226 15 10.195455549369091 19.063627863425783 49.361816933838185 21.379099653366943 16 10.3319398358221 26.14110517886451 39.41036672216851 24.116588263144877 17 12.34534756543509 22.44822656391551 42.14838434080867 23.05804152984073 18 14.468524633958928 30.000489333197557 39.44938112575731 16.081604907086206 19 14.502645705572181 23.485877447161936 36.90775804721669 25.103718800049197 20 11.490998252948232 31.957954375630678 35.263466251218375 21.287581120202717 21 12.79526960275402 24.443647992212988 36.24874525710492 26.512337147928072 22 10.527276358197192 28.381589962585846 31.723338945235678 29.367794733981277 23 10.325856233906558 23.392507382979932 43.50846612557877 22.77317025753474 24 16.402052025376555 21.79714890673706 38.49954571363956 23.301253354246818 25 11.046498556467068 26.025119985822563 38.088902584340545 24.839478873369828 26 13.966495223711235 21.271975358767197 36.701576843166066 28.059952574355503 27 19.50336648014696 21.50394574485109 39.83873164835194 19.153956126650012 28 12.936250464535906 21.759324773088263 37.161417796651634 28.143006965724194 29 14.75233788854048 21.826112141943657 34.66806677678868 28.753483192727185 30 18.020819143772705 21.704704608063945 36.03343865018099 24.24103759798236 31 16.042458251281854 19.952362751957004 34.62720084218211 29.377978154579033 32 11.813825911118576 19.459855501229285 39.13686914040028 29.589449447251866 33 9.92817382173195 21.525502855986595 41.9382355702914 26.608087751990066 34 10.525028070532752 15.614754586176204 45.62979166308484 28.230425680206206 35 12.63127685546552 20.235514745460772 41.36042564053054 25.772782758543162 36 12.08719124067126 22.15092358334733 41.668573302774256 24.093311873207156 37 11.785523936989755 21.91921770169455 39.835557595178614 26.459700766137082 38 11.247125167464368 20.088450281763347 36.816239514052455 31.84818503671983 39 18.559614669944757 17.928507097315148 39.13885292363361 24.37302530910649 40 11.831415455787424 15.816439214897947 43.63013816388959 28.72200716542504 41 16.22073423785032 19.243094119934245 34.80217052336169 29.734001118853744 42 17.228496120381255 14.181934082850722 43.04069003915988 25.54887975760814 43 21.19804637027182 19.484718917753668 38.705594665474635 20.61164004649988 44 13.124445367271015 22.18954123028946 38.6971305236791 25.98888287876043 45 16.742204723784635 20.697603986610787 35.93874606384343 26.621445225761143 46 21.3691807372003 15.86867884004227 36.38866810116237 26.373472321595067 47 13.947318652455726 15.578517479114067 41.713274551631926 28.760889316798277 48 15.937317739915438 13.786367706124997 36.187909237949505 34.08840531601005 49 18.414401737265106 13.915974877369134 41.6179207042166 26.051702681149163 50 17.11780101596152 13.517631204116748 41.02397600415801 28.340591775763723 51 14.20282993290845 12.929902358189254 39.69669276884561 33.17057494005668 52 12.985712793153567 13.076173308593352 49.25403137816066 24.684082520092417 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 315.0 1 1248.5 2 2182.0 3 25993.5 4 49805.0 5 27286.5 6 4768.0 7 4515.0 8 4262.0 9 4388.5 10 4515.0 11 4748.0 12 4981.0 13 4923.0 14 4623.0 15 4381.0 16 4007.5 17 3634.0 18 3340.0 19 3046.0 20 2820.5 21 2595.0 22 2513.0 23 2431.0 24 2374.0 25 2317.0 26 3185.5 27 4054.0 28 3548.5 29 3043.0 30 3273.0 31 3503.0 32 4386.0 33 5269.0 34 6541.0 35 7813.0 36 9255.0 37 10697.0 38 12579.5 39 18035.0 40 21608.0 41 31036.5 42 40465.0 43 59232.5 44 78000.0 45 102402.5 46 126805.0 47 129331.5 48 131858.0 49 110163.0 50 88468.0 51 68535.0 52 48602.0 53 37357.5 54 26113.0 55 20149.0 56 14185.0 57 12606.0 58 11027.0 59 9684.5 60 8342.0 61 6790.0 62 5238.0 63 4364.5 64 3011.0 65 2531.0 66 2188.0 67 1845.0 68 1514.0 69 1183.0 70 1209.5 71 1236.0 72 1122.0 73 1008.0 74 823.0 75 638.0 76 471.0 77 304.0 78 230.5 79 157.0 80 107.5 81 58.0 82 39.0 83 20.0 84 13.0 85 6.0 86 5.0 87 4.0 88 2.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 756131.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.432093016216026 #Duplication Level Percentage of deduplicated Percentage of total 1 73.02053313854664 22.221676565659358 2 11.71531849337538 7.130433242099908 3 4.745243756608067 4.332230981571453 4 2.4517977163418263 2.98453344642642 5 1.449601826409915 2.205720880889159 6 0.9569907386706764 1.7473938704929983 7 0.6485885447771084 1.3816534846736408 8 0.4885380284204062 1.1893787778278873 9 0.4093291987136202 1.1211069824555457 >10 3.522671994071929 22.532613963309117 >50 0.35813917752537405 7.522244524607167 >100 0.21322988694801276 11.937169841938882 >500 0.013054891037633435 2.6256741341926135 >1k 0.0052219564150533734 2.5866075144525205 >5k 0.0013054891037633434 2.421997994666299 >10k+ 4.351630345877812E-4 6.059563794737047 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 45757 6.051464627161166 No Hit CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCTT 6627 0.8764354324845828 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 6500 0.859639401109067 No Hit GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 5162 0.6826859366961545 No Hit TCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 2709 0.3582712519391481 No Hit CGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 2431 0.3215051360147911 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG 2319 0.30669288787260407 No Hit ACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1824 0.24122804117275976 No Hit GCCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1618 0.21398408476838007 No Hit AGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1531 0.20247814201507414 No Hit TCCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1387 0.1834338229751194 No Hit ACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 1352 0.17880499543068595 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT 1208 0.15976067639073124 No Hit TGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1114 0.14732896812853857 No Hit TGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCTTG 1032 0.1364842864530088 Illumina Single End Adapter 1 (95% over 22bp) CGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG 1007 0.1331779810641278 No Hit GGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 971 0.1284169013041391 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGCA 966 0.12775564022636288 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCC 896 0.11849798513749601 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT 877 0.11598519304194643 No Hit ATAGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT 868 0.11479492310194928 No Hit ATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 851 0.11254663543751016 No Hit CGTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG 851 0.11254663543751016 No Hit GTCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 761 0.10064393603753848 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8966700214645346 0.0 2 0.0 0.0 0.0 3.0244759175328086 0.0 3 0.0 0.0 0.0 4.943323313023801 0.0 4 0.0 0.0 0.0 6.240453043189606 0.0 5 0.0 0.0 0.0 12.465432577159248 0.0 6 0.0 0.0 0.0 13.852097057255952 0.0 7 0.0 0.0 0.0 19.102642267014577 0.0 8 0.0 0.0 0.0 25.341376031401968 0.0 9 0.0 0.0 0.0 30.28681537987465 0.0 10 0.0 0.0 0.0 32.996795528817096 0.0 11 0.0 0.0 0.0 35.6652484820752 0.0 12 0.0 0.0 0.0 37.55949696547292 0.0 13 0.0 0.0 0.0 38.26731082312457 0.0 14 1.3225221555524108E-4 0.0 0.0 38.79274887552554 0.0 15 1.3225221555524108E-4 0.0 0.0 40.47393903966376 0.0 16 1.3225221555524108E-4 0.0 0.0 42.4003248114414 0.0 17 1.3225221555524108E-4 0.0 0.0 44.84011368400449 0.0 18 1.3225221555524108E-4 0.0 0.0 45.888741501142 0.0 19 1.3225221555524108E-4 0.0 0.0 47.1770103328656 0.0 20 1.3225221555524108E-4 0.0 0.0 48.39849179573381 0.0 21 1.3225221555524108E-4 0.0 0.0 49.49618518484231 0.0 22 3.9675664666572326E-4 0.0 0.0 50.59387857395081 0.0 23 3.9675664666572326E-4 0.0 0.0 51.41278429266886 0.0 24 0.002909548742215304 0.0 0.0 52.101421579065004 0.0 25 0.002909548742215304 0.0 0.0 52.7435060855857 0.0 26 0.002909548742215304 0.0 0.0 53.355437086959796 0.0 27 0.003306305388881027 0.0 0.0 53.96128448641836 0.0 28 0.003306305388881027 0.0 0.0 54.58247314288133 0.0 29 0.003306305388881027 0.0 0.0 55.31276987717737 0.0 30 0.003306305388881027 0.0 0.0 55.947580511842524 0.0 31 0.003306305388881027 0.0 0.0 56.46905099777684 0.0 32 0.003306305388881027 0.0 0.0 56.98205734191562 0.0 33 0.003306305388881027 0.0 0.0 57.48289648222332 0.0 34 0.003306305388881027 0.0 0.0 58.075518660126356 0.0 35 0.003306305388881027 0.0 0.0 58.57053870294962 0.0 36 0.003306305388881027 0.0 0.0 59.05656559511513 0.0 37 0.003306305388881027 0.0 0.0 59.535318615425105 0.0 38 0.003306305388881027 0.0 0.0 60.013410374657305 0.0 39 0.0035708098199915095 0.0 0.0 60.46121637652735 0.0 40 0.0035708098199915095 0.0 0.0 60.95094633072841 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAATGG 75 0.0 46.000004 1 GGTACTC 30 1.8605515E-6 46.0 7 CTGTCGG 25 3.416038E-5 46.0 1 AGTCCAG 20 6.310078E-4 46.0 23 CGTATGG 20 6.310078E-4 46.0 1 CGCGGAA 20 6.310078E-4 46.0 3 GACACAA 25 3.416038E-5 46.0 22 ACCGCAG 25 3.416038E-5 46.0 1 AAGACGG 25 3.416038E-5 46.0 1 CGTCTAT 40 5.6061253E-9 46.0 20 CTCCACG 20 6.310078E-4 46.0 18 TGACGTA 20 6.310078E-4 46.0 11 ACTTATG 25 3.416038E-5 46.0 29 TCGATGG 30 1.8605515E-6 46.0 1 TGTGATT 50 1.6370905E-11 46.0 42 AAAGTGT 25 3.416038E-5 46.0 37 GCCGATG 25 3.416038E-5 46.0 8 GTAGCGG 105 0.0 46.0 1 GCTTATC 20 6.310078E-4 46.0 9 CTTGCGG 135 0.0 46.0 1 >>END_MODULE