##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043333_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2650149 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29888621356761 33.0 31.0 34.0 31.0 34.0 2 32.60348040808272 34.0 31.0 34.0 31.0 34.0 3 32.688029239110705 34.0 31.0 34.0 31.0 34.0 4 36.1838606055735 37.0 37.0 37.0 35.0 37.0 5 36.16408171766946 37.0 37.0 37.0 35.0 37.0 6 36.33223905523803 37.0 37.0 37.0 35.0 37.0 7 36.28842906568649 37.0 37.0 37.0 35.0 37.0 8 36.196605549348355 37.0 37.0 37.0 35.0 37.0 9 37.76447588418613 39.0 38.0 39.0 35.0 39.0 10 37.574155641814855 39.0 37.0 39.0 35.0 39.0 11 37.310673852677716 39.0 37.0 39.0 35.0 39.0 12 37.326455984172966 39.0 37.0 39.0 35.0 39.0 13 37.32449156632325 39.0 37.0 39.0 35.0 39.0 14 38.67956745073579 40.0 38.0 41.0 35.0 41.0 15 38.72368308347946 40.0 38.0 41.0 35.0 41.0 16 38.6334157060603 40.0 38.0 41.0 34.0 41.0 17 38.592668940501085 40.0 38.0 41.0 34.0 41.0 18 38.384037652222574 40.0 38.0 41.0 34.0 41.0 19 38.14470129792702 40.0 37.0 41.0 34.0 41.0 20 37.879389045672525 40.0 35.0 41.0 34.0 41.0 21 37.802781277581 40.0 35.0 41.0 34.0 41.0 22 37.75811926046422 40.0 35.0 41.0 34.0 41.0 23 37.73337121799567 39.0 35.0 41.0 34.0 41.0 24 37.64498713091226 39.0 35.0 41.0 34.0 41.0 25 37.60667532278374 39.0 35.0 41.0 34.0 41.0 26 37.561296742183174 39.0 35.0 41.0 34.0 41.0 27 37.527920882939036 39.0 35.0 41.0 34.0 41.0 28 37.431880999898496 39.0 35.0 41.0 34.0 41.0 29 37.39957149579137 39.0 35.0 41.0 34.0 41.0 30 37.25425174207186 39.0 35.0 41.0 33.0 41.0 31 37.138339014146 39.0 35.0 41.0 33.0 41.0 32 36.876666557238856 39.0 35.0 41.0 33.0 41.0 33 36.48569193656659 39.0 35.0 41.0 31.0 41.0 34 36.16351533442082 39.0 35.0 41.0 30.0 41.0 35 35.994798783011824 39.0 35.0 41.0 30.0 41.0 36 35.938949093050994 39.0 35.0 41.0 30.0 41.0 37 35.81179812908633 38.0 35.0 41.0 30.0 41.0 38 35.71153470993518 38.0 35.0 41.0 29.0 41.0 39 35.60541652563686 38.0 35.0 41.0 29.0 41.0 40 35.472799453917496 38.0 35.0 40.0 28.0 41.0 41 35.36549378921713 38.0 35.0 40.0 27.0 41.0 42 35.25855565102189 38.0 35.0 40.0 27.0 41.0 43 35.14404510840711 37.0 35.0 40.0 26.0 41.0 44 35.02979228715065 37.0 35.0 40.0 26.0 41.0 45 34.97704959230594 37.0 35.0 40.0 25.0 41.0 46 34.8706065206145 37.0 35.0 40.0 25.0 41.0 47 34.70710401566101 36.0 35.0 40.0 24.0 41.0 48 34.624038497458066 36.0 35.0 40.0 24.0 41.0 49 34.5427592939114 36.0 34.0 40.0 25.0 41.0 50 34.40831402309832 36.0 34.0 40.0 24.0 41.0 51 33.87342900342585 35.0 34.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 7.0 13 5.0 14 29.0 15 52.0 16 118.0 17 247.0 18 483.0 19 1069.0 20 1938.0 21 3161.0 22 4803.0 23 7463.0 24 12637.0 25 23220.0 26 37145.0 27 46579.0 28 49075.0 29 48375.0 30 50291.0 31 54642.0 32 62736.0 33 81168.0 34 180728.0 35 252702.0 36 246070.0 37 239368.0 38 398278.0 39 847620.0 40 137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.044291471913464 16.955688151873723 22.83384821004404 31.16617216616877 2 36.44519610029474 19.072361591744464 24.01400826896903 20.46843403899177 3 25.589202720299873 20.513412642081633 35.16255123768512 18.73483339993336 4 22.337272357139167 23.162358041000715 33.56113184579433 20.93923775606579 5 21.359516012118565 30.71517865599255 30.29939071350328 17.625914618385607 6 76.31246394070673 1.9854355358887368 18.765246784237412 2.9368537391671183 7 76.36917773302557 1.8312932593601343 17.165789546172686 4.6337394614416025 8 67.45590530947506 3.1921224051930666 22.433795231890734 6.918177053441147 9 39.414010306590306 15.328496624152077 27.28891847213119 17.968574597126423 10 27.972238542059337 16.509373623898128 36.311618705212425 19.206769128830114 11 25.059307986079272 13.505127447551063 40.281697368713985 21.15386719765568 12 20.331045537439593 14.716380097873744 42.70091983507343 22.25165452961324 13 16.535787233095196 18.107774317594973 44.05235328277769 21.304085166532147 14 17.081039594377522 18.054947099200838 43.38446630736612 21.479546999055525 15 20.334252904270667 14.738529795871855 43.37341032523077 21.55380697462671 16 19.07583309466751 19.012553633776818 39.65188372427362 22.25972954728206 17 20.187695106954365 19.81967806338436 39.35325900543705 20.639367824224223 18 20.377910826900674 25.35219717834733 36.084084328843396 18.185807665908595 19 21.350573118718984 21.286161646005564 35.14436358106657 22.218901654208874 20 20.57457901423656 25.476643011392948 35.1578722554845 18.790905718885995 21 18.244370410871237 20.059777770985708 36.978600071165815 24.717251746977244 22 19.397550854687793 21.717043079464588 34.702690301564175 24.18271576428344 23 20.64408454015227 19.586559095356527 38.01706998361224 21.752286380878964 24 22.677290974960275 18.34100648680508 35.00361677777363 23.978085760461017 25 18.291273434059747 19.225183187813215 37.50645718410549 24.977086194021545 26 17.980875792266772 18.371495338563985 37.4804586459101 26.167170223259145 27 21.383778798852443 20.53043055315003 37.192512571934635 20.89327807606289 28 21.735155268628294 21.487735217906614 33.78727007424865 22.989839439216436 29 22.765512429678484 19.400154481880076 35.863568425775306 21.970764662666138 30 24.614125469926407 18.793320677441155 34.65099509499277 21.941558757639665 31 26.379233771384175 20.11249178819757 31.235979561903875 22.27229487851438 32 25.50750920042609 18.129810814410813 31.703311776054854 24.659368209108244 33 22.127887903661268 20.08758752809748 36.62345022864752 21.161074339593736 34 20.64717870580107 21.36317618367873 33.924318972254014 24.065326138266187 35 23.120888674561318 23.662707266648024 32.18954858764545 21.026855471145208 36 23.607314154789034 21.571768228880718 31.150022130831132 23.670895485499116 37 22.950369960330534 23.234504927836134 32.073932446817146 21.741192665016193 38 24.090720936822798 20.131811456638854 29.172774813793488 26.60469279274486 39 26.626993425652675 18.03174085683484 33.111760885897354 22.229504831615127 40 22.18313008061056 18.07434223509697 35.71851997755598 24.024007706736487 41 22.146188761462092 22.092682335974317 30.80539999826425 24.95572890429934 42 21.146094049806255 17.787301770579692 33.89511306722754 27.17149111238651 43 23.04202518424436 19.15662100508311 33.87507645796519 23.92627735270734 44 21.799830877433685 19.795490744105333 34.20800113503052 24.196677243430464 45 22.85743178968428 19.728211508107655 33.558905555876294 23.85545114633177 46 23.438870795566586 19.185525040290187 32.813287101970495 24.56231706217273 47 20.684270959859237 19.982084026218903 35.00410731623014 24.329537697691713 48 21.715005458183672 18.554315247935115 32.73110304364019 26.999576250241024 49 21.52961965534768 16.626838717370234 36.27886582980806 25.564675797474028 50 20.238522437795005 16.919199637454348 37.777083477193166 25.065194447557477 51 19.254011755565443 15.826317690061956 36.71684120402287 28.202829350349734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 881.0 1 4711.0 2 8541.0 3 93905.0 4 179269.0 5 102660.0 6 26051.0 7 23130.5 8 20210.0 9 19507.5 10 18805.0 11 18313.0 12 17821.0 13 16828.5 14 15836.0 15 14959.0 16 14082.0 17 13243.5 18 12405.0 19 11176.5 20 9948.0 21 9512.0 22 9076.0 23 8960.5 24 8845.0 25 8753.5 26 10079.5 27 11497.0 28 12310.5 29 13124.0 30 15361.0 31 17598.0 32 20077.0 33 22556.0 34 26858.5 35 31161.0 36 34012.5 37 36864.0 38 40433.5 39 44003.0 40 48403.5 41 52804.0 42 61621.0 43 70438.0 44 80579.0 45 90720.0 46 103974.5 47 117229.0 48 156450.5 49 195672.0 50 235592.5 51 275513.0 52 280535.5 53 285558.0 54 251928.5 55 218299.0 56 192625.0 57 166951.0 58 149868.0 59 132785.0 60 128714.0 61 124643.0 62 117015.0 63 109387.0 64 102473.5 65 95560.0 66 78113.5 67 60667.0 68 49772.0 69 38877.0 70 33003.0 71 27129.0 72 25727.5 73 24326.0 74 20980.0 75 13306.5 76 8979.0 77 7043.0 78 5107.0 79 3781.5 80 2456.0 81 1832.5 82 1209.0 83 814.0 84 419.0 85 406.5 86 394.0 87 232.5 88 71.0 89 57.5 90 44.0 91 39.5 92 35.0 93 19.0 94 3.0 95 4.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2650149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.883552850845877 #Duplication Level Percentage of deduplicated Percentage of total 1 73.81949410706001 21.321692594639735 2 10.812396457865608 6.246008490701201 3 3.933575260687309 3.408468868045252 4 1.9978215012164366 2.308167316677648 5 1.1597726894538771 1.6749177885404365 6 0.8124285160585942 1.4079493188667616 7 0.6223683398919487 1.258334618657362 8 0.5369505386096582 1.240723140817778 9 0.441932235746597 1.1488115778911383 >10 5.342690107925213 33.82180509119365 >50 0.3593067640381393 6.836512015334348 >100 0.14952988880601523 7.837976011052057 >500 0.006064553499680027 1.2168314751031906 >1k 0.004614334184539151 2.684112038353891 >5k 6.591905977913073E-4 1.3755469683978265 >10k+ 3.9551435867478434E-4 6.21214268572787 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 136273 5.142088237302884 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 16450 0.6207198161310931 No Hit CCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 10413 0.3929213036700956 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 9253 0.34915017985781177 No Hit CTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGCT 8957 0.33798099654019453 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTG 6798 0.2565138790309526 No Hit GCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCTGC 5686 0.21455397413503918 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTC 5429 0.20485640618697287 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTT 4745 0.1790465366286952 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 4087 0.1542177439834515 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCC 3881 0.1464445961340287 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3796 0.14323722930295615 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCT 3531 0.13323779153549478 No Hit GGGCCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTC 2968 0.1119937029955674 No Hit CGTCTGTCTCTTATACACATCTGACGCGTACTCGGTCGTATGCCGTCTTCT 2961 0.11172956690359674 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3501312567708457 0.0 2 0.0 0.0 0.0 1.114880710480807 0.0 3 0.0 0.0 0.0 1.8537070934502173 0.0 4 0.0 0.0 0.0 2.339642035221416 0.0 5 0.0 0.0 0.0 4.761203992681166 0.0 6 0.0 0.0 0.0 5.683906829389593 0.0 7 0.0 0.0 0.0 8.086564189409728 0.0 8 0.0 0.0 0.0 10.891161213954385 0.0 9 0.0 0.0 0.0 13.589273659707436 0.0 10 0.0 0.0 0.0 15.14118640121744 0.0 11 0.0 0.0 0.0 16.410737660410792 0.0 12 0.0 0.0 0.0 17.32234678125645 0.0 13 0.0 0.0 0.0 17.78745270548939 0.0 14 0.0 0.0 0.0 18.092492157988097 0.0 15 0.0 0.0 0.0 18.879089439876775 0.0 16 0.0 0.0 0.0 19.747568910276364 0.0 17 0.0 0.0 0.0 20.80649050298681 0.0 18 0.0 0.0 0.0 21.437964431433855 0.0 19 0.0 0.0 0.0 22.12569934747065 0.0 20 0.0 0.0 0.0 22.87924188413557 0.0 21 4.150710016682081E-4 0.0 0.0 23.619388947564836 0.0 22 4.905384565169732E-4 0.0 0.0 24.374252164689608 0.0 23 4.905384565169732E-4 0.0 0.0 25.0118389569794 0.0 24 4.905384565169732E-4 0.0 0.0 25.551393525420647 0.0 25 4.905384565169732E-4 0.0 0.0 26.061440319016025 0.0 26 4.905384565169732E-4 0.0 0.0 26.56273288784895 0.0 27 4.905384565169732E-4 0.0 0.0 27.10896632604431 0.0 28 4.905384565169732E-4 0.0 0.0 27.626295729032595 0.0 29 4.905384565169732E-4 0.0 0.0 28.184754894913457 0.0 30 5.282721839413557E-4 0.0 0.0 28.68812281875472 0.0 31 5.282721839413557E-4 0.0 0.0 29.194018902333415 0.0 32 5.282721839413557E-4 0.0 0.0 29.763609517804472 0.0 33 5.282721839413557E-4 0.0 0.0 30.29535320466887 0.0 34 5.282721839413557E-4 0.0 0.0 30.889206606873802 0.0 35 5.282721839413557E-4 0.0 0.0 31.387744613604745 0.0 36 5.282721839413557E-4 0.0 0.0 31.895640584736935 0.0 37 5.282721839413557E-4 0.0 0.0 32.52413354871745 0.0 38 5.660059113657383E-4 0.0 0.0 33.16066379663936 0.0 39 5.660059113657383E-4 0.0 0.0 33.88492496082296 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGATA 25 3.8921888E-5 45.000004 37 CGTTTTT 33465 0.0 44.408337 1 CACTTAC 4030 0.0 41.59429 36 CGCACTT 4050 0.0 41.5 34 GCACTTA 4045 0.0 41.495674 35 ACCCGCA 4120 0.0 41.286407 31 CGGTCTA 395 0.0 41.01266 30 CCGCACT 4105 0.0 40.943974 33 CATGCGG 425 0.0 40.764706 1 TCAACGC 4730 0.0 40.671246 15 CCCGCAC 4215 0.0 40.622776 32 TCGGCGT 1480 0.0 40.591217 4 AAGCTTA 4535 0.0 40.53473 22 CAACGCA 4685 0.0 40.53362 16 CTTATGA 4490 0.0 40.489975 25 GCTTATG 4525 0.0 40.47514 24 ATCAACG 4755 0.0 40.457413 14 AGCTTAT 4545 0.0 40.34654 23 CGCAAGC 4710 0.0 40.318474 19 AACGCAA 4700 0.0 40.30851 17 >>END_MODULE