##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043332_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1159473 Sequences flagged as poor quality 0 Sequence length 52 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17298721056894 33.0 31.0 34.0 30.0 34.0 2 32.5024196337474 34.0 31.0 34.0 31.0 34.0 3 32.573150043166166 34.0 31.0 34.0 31.0 34.0 4 36.11540501589946 37.0 35.0 37.0 35.0 37.0 5 35.99940231467227 37.0 35.0 37.0 35.0 37.0 6 36.26424677418103 37.0 37.0 37.0 35.0 37.0 7 36.1917302084654 37.0 37.0 37.0 35.0 37.0 8 36.15868847312529 37.0 37.0 37.0 35.0 37.0 9 37.681722644684264 39.0 38.0 39.0 35.0 39.0 10 37.52459091328561 39.0 37.0 39.0 35.0 39.0 11 37.24236183162523 39.0 37.0 39.0 34.0 39.0 12 37.260804693166634 39.0 37.0 39.0 34.0 39.0 13 37.256820986775885 39.0 37.0 39.0 34.0 39.0 14 38.64747087685526 40.0 38.0 41.0 34.0 41.0 15 38.75419091259564 40.0 38.0 41.0 35.0 41.0 16 38.77103822167485 40.0 38.0 41.0 35.0 41.0 17 38.7414954897613 40.0 38.0 41.0 35.0 41.0 18 38.454296046565986 40.0 38.0 41.0 34.0 41.0 19 38.16027626344037 40.0 37.0 41.0 34.0 41.0 20 37.84852946122937 40.0 35.0 41.0 34.0 41.0 21 37.77787581082095 40.0 35.0 41.0 34.0 41.0 22 37.73887705880171 40.0 35.0 41.0 34.0 41.0 23 37.7266723761571 39.0 35.0 41.0 34.0 41.0 24 37.6380036447593 39.0 35.0 41.0 34.0 41.0 25 37.551559199739884 39.0 35.0 41.0 34.0 41.0 26 37.50857156656515 39.0 35.0 41.0 33.0 41.0 27 37.542831959002065 39.0 35.0 41.0 34.0 41.0 28 37.523255823982105 39.0 35.0 41.0 33.0 41.0 29 37.481922390603316 40.0 35.0 41.0 33.0 41.0 30 37.42176575047457 40.0 35.0 41.0 33.0 41.0 31 37.31959950770738 40.0 35.0 41.0 33.0 41.0 32 37.11156189061755 40.0 35.0 41.0 33.0 41.0 33 36.920874397247715 40.0 35.0 41.0 32.0 41.0 34 36.680369443704166 40.0 35.0 41.0 31.0 41.0 35 36.540320473180486 40.0 35.0 41.0 31.0 41.0 36 36.48780523565448 40.0 35.0 41.0 31.0 41.0 37 36.35564001921563 39.0 35.0 41.0 31.0 41.0 38 36.3027228749613 39.0 35.0 41.0 30.0 41.0 39 36.270916183473005 39.0 35.0 41.0 30.0 41.0 40 36.21118732389629 39.0 35.0 41.0 30.0 41.0 41 36.21122095986711 39.0 35.0 41.0 30.0 41.0 42 36.160415982088416 39.0 35.0 41.0 30.0 41.0 43 36.0602325366783 39.0 35.0 41.0 30.0 41.0 44 35.92347989129544 39.0 35.0 41.0 30.0 41.0 45 35.856053569164615 39.0 35.0 41.0 29.0 41.0 46 35.83587457405218 39.0 35.0 41.0 29.0 41.0 47 35.74352141015789 39.0 35.0 41.0 29.0 41.0 48 35.70689270039061 38.0 35.0 41.0 28.0 41.0 49 35.656490491801016 38.0 35.0 41.0 28.0 41.0 50 35.51752649695163 38.0 35.0 40.0 27.0 41.0 51 35.44194302066542 38.0 35.0 40.0 27.0 41.0 52 35.10371263496433 38.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 1.0 14 6.0 15 10.0 16 49.0 17 108.0 18 228.0 19 424.0 20 794.0 21 1319.0 22 2068.0 23 3506.0 24 6468.0 25 11590.0 26 15959.0 27 17707.0 28 16506.0 29 16327.0 30 18180.0 31 21528.0 32 26959.0 33 34952.0 34 61292.0 35 104212.0 36 123316.0 37 89139.0 38 146223.0 39 439430.0 40 1169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.96940765330456 19.084877353763304 25.817763759915064 28.12795123301707 2 34.02718303919109 19.15827276702433 26.058131582192946 20.756412611591646 3 20.658178327567782 21.268024352442875 39.15089010265871 18.922907217330632 4 22.07373522281243 23.911725413183404 36.562214040344195 17.452325323659974 5 19.39605320693108 28.654656037699887 32.79576152269178 19.15352923267726 6 70.95482171641771 1.6989615109623077 22.910925912030724 4.435290860589251 7 71.67445899990771 1.4949895340383088 19.23580799207916 7.594743473974814 8 59.20077483477407 3.3767927325603955 27.63928094918985 9.783151483475683 9 32.34029597929404 17.90114991897181 31.152342486629703 18.60621161510445 10 25.044308923105586 19.597610293642028 43.09319837546886 12.264882407783537 11 22.270721267334384 15.922061143295274 41.74379222284607 20.063425366524275 12 18.501422629073723 19.15508166209994 43.594633078993645 18.74886262983269 13 12.946916400813127 22.272187450678025 43.66630357067392 21.11459257783493 14 11.552231056695584 22.625451390416163 44.4404483761157 21.38186917677255 15 12.810906334170783 18.569298293276344 47.97110411367923 20.648691258873644 16 13.265854401094291 25.064921735995576 40.22379132588685 21.445432537023283 17 14.935405999104765 22.30176985578793 41.42847655788449 21.334347587222815 18 16.256264699566096 29.066567311183615 39.46517081467184 15.211997174578451 19 15.853581756539391 23.785116169156158 36.97490152853926 23.386400545765188 20 13.277066391369182 29.94153378302039 35.46887249638414 21.312527329226295 21 13.800666337206643 24.17330977090454 37.560339913046704 24.46568397884211 22 12.355958267247276 26.860910085875222 33.37637012677311 27.406761520104396 23 12.050215917058871 23.485238552342313 43.249821255001194 21.21472427559762 24 17.04645127570888 21.993440123228396 38.84316409265244 22.116944508410285 25 13.23963559306685 25.190668519232446 38.49740356179057 23.072292325910134 26 14.772659647960754 21.9700674358092 37.021905641614765 26.235367274615278 27 19.735259035786086 22.925846483704234 37.35697165867597 19.981922821833713 28 14.640875639191254 23.25961880957987 34.482648582588816 27.616856968640064 29 15.715070553604956 22.1586876106645 33.93507222677889 28.191169608951654 30 18.32858548668231 25.266565068785564 32.24758144432859 24.15726800020354 31 15.92283735800661 20.415740599393 31.120517683464815 32.540904359135574 32 13.649390714574638 22.411992344798023 34.46436441383284 29.474252526794505 33 12.641950265336064 21.703998281978105 36.08924054290182 29.56481090978401 34 12.867483762019468 20.127419957170197 35.55166873226026 31.453427548550074 35 14.125210332625254 19.391482164742087 38.00502469656473 28.478282806067927 36 17.915553014171092 20.0311693329642 36.915736718319444 25.13754093454526 37 14.154102769102861 19.590106884765753 39.09000037085814 27.165789975273245 38 16.302233859693153 19.450215744566712 33.16299732723401 31.08455306850612 39 23.064271440559633 17.05404093066419 35.28706576177281 24.594621867003372 40 16.97072721831384 17.26525757822735 38.84195664754591 26.922058555912905 41 18.663479011585434 21.558673638799696 31.003912984605936 28.77393436500893 42 19.10359275291447 17.731676373662864 37.50324500872379 25.661485864698875 43 21.806976100349036 20.00193191217044 35.92037072014613 22.270721267334384 44 14.68908719737329 22.317725380409893 37.41975880421536 25.573428618001454 45 16.796337646499744 20.063684104761386 36.232581526262365 26.907396722476506 46 21.833194908376477 17.794636011360335 34.1748363265035 26.19733275375968 47 16.18838903536348 16.64678694544849 38.95933756111612 28.2054864580719 48 17.710028607824416 14.760240212579337 34.575449363633304 32.95428181596294 49 19.00277108651948 14.995174531877845 39.928743489499105 26.073310892103567 50 17.49027359843653 14.478733010600505 40.625266823807024 27.40572656715594 51 15.479877496069335 14.24034884814049 38.552428560216576 31.727345095573593 52 14.16540100545679 14.545659967933707 46.44394479215988 24.844994234449615 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 562.0 1 2036.0 2 3510.0 3 46784.0 4 90058.0 5 49263.0 6 8468.0 7 7974.5 8 7481.0 9 7808.5 10 8136.0 11 8377.5 12 8619.0 13 8378.5 14 7644.5 15 7151.0 16 6432.5 17 5714.0 18 5235.5 19 4757.0 20 4351.0 21 3945.0 22 3893.0 23 3841.0 24 3799.5 25 3758.0 26 4748.0 27 5738.0 28 5699.5 29 5661.0 30 6002.5 31 6344.0 32 8185.5 33 10027.0 34 11713.0 35 13399.0 36 15145.5 37 16892.0 38 19213.0 39 23558.0 40 25582.0 41 30378.0 42 35174.0 43 42832.0 44 50490.0 45 60243.5 46 69997.0 47 89045.5 48 108094.0 49 138346.5 50 168599.0 51 172906.0 52 177213.0 53 150229.0 54 123245.0 55 95635.0 56 68025.0 57 52325.5 58 36626.0 59 28425.0 60 20224.0 61 15934.0 62 11644.0 63 9602.5 64 6017.5 65 4474.0 66 3643.5 67 2813.0 68 2234.0 69 1655.0 70 1535.0 71 1415.0 72 1445.5 73 1476.0 74 1083.5 75 691.0 76 507.0 77 323.0 78 280.0 79 237.0 80 159.0 81 81.0 82 60.5 83 40.0 84 36.0 85 32.0 86 22.0 87 12.0 88 10.0 89 7.0 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1159473.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.069462966602106 #Duplication Level Percentage of deduplicated Percentage of total 1 73.4051550781809 22.80658747259226 2 11.972046061422391 7.439300834796351 3 4.668558822781738 4.351488463554622 4 2.396973093005671 2.9789066698032567 5 1.3953344747368877 2.167614639443047 6 0.8864210100663912 1.6524374847045462 7 0.628531491149384 1.366969512132629 8 0.47499594820835467 1.180629521771642 9 0.3630994102664984 1.0153173312423034 >10 3.2426755669061404 21.705297689793802 >50 0.35158480209444354 7.358037375447897 >100 0.19764359434394746 11.591961191704065 >500 0.010578107865828365 2.292117045527428 >1k 0.005289053932914183 3.057539875989949 >5k 8.351137788811868E-4 1.968044803070584 >10k+ 2.783712596270622E-4 7.067750088425623 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 81719 7.047943332876229 No Hit CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCTT 8101 0.6986794862838548 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 8074 0.6963508421498388 No Hit GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 6580 0.5674992000676169 No Hit CGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 3978 0.3430869024116991 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCG 3144 0.2711576724943142 No Hit TCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 3135 0.27038145778297556 No Hit ACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 2362 0.2037132386868862 No Hit CGTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 2273 0.19603733765253695 No Hit GCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 2135 0.1841353787453438 No Hit AGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 1840 0.15869278542924242 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 1684 0.14523839709937186 No Hit TCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 1619 0.1396324019619258 No Hit CGTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 1612 0.13902867940866237 No Hit ACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 1548 0.13350893035025396 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCT 1544 0.13316394603410342 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTT 1535 0.13238773132276474 No Hit TGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCTTG 1275 0.10996375077298048 Illumina Single End Adapter 1 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 1243 0.10720387624377627 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCC 1230 0.10608267721628704 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7189473148576982 0.0 2 0.0 0.0 0.0 2.4254122346962803 0.0 3 0.0 0.0 0.0 4.05874047951095 0.0 4 0.0 0.0 0.0 5.102059297629181 0.0 5 0.0 0.0 0.0 10.3666924542443 0.0 6 0.0 0.0 0.0 11.897215372846112 0.0 7 0.0 0.0 0.0 16.318879352947416 0.0 8 0.0 0.0 0.0 21.76023072551064 0.0 9 0.0 0.0 0.0 25.878222261320445 0.0 10 0.0 0.0 0.0 28.336494252130063 0.0 11 0.0 0.0 0.0 30.518865036098298 0.0 12 0.0 0.0 0.0 32.02213419372422 0.0 13 0.0 0.0 0.0 32.6672548649257 0.0 14 0.0 0.0 0.0 33.12203043969114 0.0 15 0.0 0.0 0.0 34.53767358101482 0.0 16 0.0 0.0 0.0 36.17755652783635 0.0 17 0.0 0.0 0.0 37.96923257376412 0.0 18 0.0 0.0 0.0 38.939673455095544 0.0 19 0.0 0.0 0.0 39.98937448306256 0.0 20 0.0 0.0 0.0 41.137913517606705 0.0 21 0.0 0.0 0.0 42.28145027956666 0.0 22 8.624607903763175E-5 0.0 0.0 43.357025131244974 0.0 23 1.724921580752635E-4 0.0 0.0 44.1817101390028 0.0 24 2.5873823711289524E-4 0.0 0.0 44.86728022127294 0.0 25 2.5873823711289524E-4 0.0 0.0 45.53827471618572 0.0 26 2.5873823711289524E-4 0.0 0.0 46.2221198768751 0.0 27 2.5873823711289524E-4 0.0 0.0 46.877762569719174 0.0 28 3.44984316150527E-4 0.0 0.0 47.52141705757702 0.0 29 3.44984316150527E-4 0.0 0.0 48.27201668344153 0.0 30 3.44984316150527E-4 0.0 0.0 48.940337549904136 0.0 31 3.44984316150527E-4 0.0 0.0 49.54069650608509 0.0 32 3.44984316150527E-4 0.0 0.0 50.142262907372576 0.0 33 3.44984316150527E-4 0.0 0.0 50.7152818564986 0.0 34 3.44984316150527E-4 0.0 0.0 51.36816467481347 0.0 35 3.44984316150527E-4 0.0 0.0 51.901941657977375 0.0 36 3.44984316150527E-4 0.0 0.0 52.410879770378436 0.0 37 3.44984316150527E-4 0.0 0.0 52.93534217700628 0.0 38 3.44984316150527E-4 0.0 0.0 53.446436441383284 0.0 39 3.44984316150527E-4 0.0 0.0 53.99815260898701 0.0 40 4.312303951881588E-4 0.0 0.0 54.535638173549536 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 35 1.01957994E-7 46.000004 37 CTCGCGG 70 0.0 46.000004 1 ACCGTAG 35 1.01957994E-7 46.000004 38 GCGTAGG 145 0.0 46.000004 1 GCGAGAC 25 3.417174E-5 46.0 20 CGGGTAC 110 0.0 46.0 5 AACCGGC 20 6.3114776E-4 46.0 2 ACACGTT 25 3.417174E-5 46.0 22 TGCCCGC 20 6.3114776E-4 46.0 28 ACGTTTC 25 3.417174E-5 46.0 24 TGGACCG 20 6.3114776E-4 46.0 22 GCAACCG 40 5.6115823E-9 46.0 35 CAACCGG 25 3.417174E-5 46.0 1 TCGGGCA 40 5.6115823E-9 46.0 4 GACCATA 60 0.0 46.0 8 CCCGTGA 30 1.8614173E-6 46.0 13 ACTAGGT 40 5.6115823E-9 46.0 34 TTGCGGA 30 1.8614173E-6 46.0 2 AGCGATG 20 6.3114776E-4 46.0 16 CGCAGCG 20 6.3114776E-4 46.0 25 >>END_MODULE