##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043327_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2564185 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3403178787802 33.0 31.0 34.0 31.0 34.0 2 32.62782989526887 34.0 31.0 34.0 31.0 34.0 3 32.727163211702745 34.0 31.0 34.0 31.0 34.0 4 36.20696205616989 37.0 37.0 37.0 35.0 37.0 5 36.189396630898315 37.0 37.0 37.0 35.0 37.0 6 36.35435391752155 37.0 37.0 37.0 35.0 37.0 7 36.30268915854355 37.0 37.0 37.0 35.0 37.0 8 36.20091296064832 37.0 37.0 37.0 35.0 37.0 9 37.77617722590219 39.0 38.0 39.0 35.0 39.0 10 37.58272511538754 39.0 37.0 39.0 35.0 39.0 11 37.243211390753785 39.0 37.0 39.0 35.0 39.0 12 37.23324058131531 39.0 37.0 39.0 35.0 39.0 13 37.18179733521567 39.0 37.0 39.0 34.0 39.0 14 38.51903197312206 40.0 37.0 41.0 35.0 41.0 15 38.588104602437035 40.0 37.0 41.0 35.0 41.0 16 38.491732070813924 40.0 37.0 41.0 34.0 41.0 17 38.410979317014956 40.0 37.0 41.0 34.0 41.0 18 38.27440219796934 40.0 37.0 41.0 34.0 41.0 19 38.08975873425669 40.0 37.0 41.0 34.0 41.0 20 37.87448838519842 40.0 35.0 41.0 34.0 41.0 21 37.795568572470394 40.0 35.0 41.0 34.0 41.0 22 37.75496307793704 40.0 35.0 41.0 34.0 41.0 23 37.73575112560131 39.0 35.0 41.0 34.0 41.0 24 37.64110584844697 39.0 35.0 41.0 34.0 41.0 25 37.60904575917884 39.0 35.0 41.0 34.0 41.0 26 37.58836589403651 39.0 35.0 41.0 34.0 41.0 27 37.559554010338566 39.0 35.0 41.0 34.0 41.0 28 37.47201781462726 39.0 35.0 41.0 34.0 41.0 29 37.41710680001638 39.0 35.0 41.0 34.0 41.0 30 37.330050288883214 39.0 35.0 41.0 33.0 41.0 31 37.22610225081264 39.0 35.0 41.0 33.0 41.0 32 37.03946439121982 39.0 35.0 41.0 33.0 41.0 33 36.68267266207391 39.0 35.0 41.0 32.0 41.0 34 36.397707263711474 39.0 35.0 41.0 31.0 41.0 35 36.289696336262786 39.0 35.0 41.0 31.0 41.0 36 36.17599120188286 39.0 35.0 41.0 31.0 41.0 37 36.08996776753627 39.0 35.0 41.0 31.0 41.0 38 35.94657756753121 38.0 35.0 41.0 30.0 41.0 39 35.85500110171458 38.0 35.0 41.0 30.0 41.0 40 35.76065494494352 38.0 35.0 40.0 30.0 41.0 41 35.686580336442184 38.0 35.0 40.0 30.0 41.0 42 35.60388934495756 38.0 35.0 40.0 30.0 41.0 43 35.492288192934595 37.0 35.0 40.0 29.0 41.0 44 35.39378710974442 37.0 35.0 40.0 29.0 41.0 45 35.33759030647165 37.0 35.0 40.0 29.0 41.0 46 35.23024391765805 37.0 35.0 40.0 28.0 41.0 47 35.08683733817958 37.0 35.0 40.0 27.0 41.0 48 35.016102582301976 36.0 35.0 40.0 27.0 41.0 49 34.95911371449408 36.0 35.0 40.0 27.0 41.0 50 34.89318009425997 36.0 35.0 40.0 27.0 41.0 51 34.5071283858224 35.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 0.0 12 3.0 13 3.0 14 15.0 15 43.0 16 109.0 17 202.0 18 444.0 19 897.0 20 1634.0 21 2720.0 22 4425.0 23 6794.0 24 11060.0 25 19113.0 26 29979.0 27 38690.0 28 41730.0 29 43026.0 30 45333.0 31 51438.0 32 60658.0 33 78966.0 34 192240.0 35 263410.0 36 220770.0 37 234363.0 38 375752.0 39 840172.0 40 195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.563311539534006 17.465315490106992 24.342120400829113 28.62925256952989 2 33.9268422520216 20.208955282087683 24.6287221865817 21.235480279309023 3 26.671125523314426 20.642894330947257 32.509861807942876 20.17611833779544 4 23.699889048567087 24.02591856671808 30.650362590842704 21.623829793872126 5 22.18907762115448 31.30168065096707 27.928172109266686 18.58106961861176 6 78.83034960426022 2.1216097902452438 16.09993038723805 2.948110218256483 7 78.7696285564419 2.0031705980652723 14.509093532642925 4.718107312849892 8 69.42221407581746 3.2835774329855294 20.217963992457644 7.076244498739366 9 42.22004262562958 15.026216907126436 25.09362623991639 17.660114227327593 10 30.59693430856198 15.53105567656 33.9123347184388 19.95967529643922 11 27.320571643621655 12.99617617293604 38.09717317588239 21.586079007559906 12 22.568496422840006 14.105144519603693 40.866864130318206 22.45949492723809 13 17.211238658677125 17.34410738694751 42.87904343875344 22.565610515621923 14 18.446094958047098 17.223991248681354 42.42981688138726 21.900096911884283 15 22.7641141337306 14.311954870650908 41.26991617219507 21.654014823423427 16 21.81320770537227 18.127280207941315 37.39379178959397 22.66572029709245 17 21.95621610765214 18.75531601659007 37.87320337651144 21.41526449924635 18 22.53523049233967 25.23640064971911 33.65907686067893 18.569291997262287 19 23.06990330260882 21.772844003065302 32.25761791758395 22.899634776741927 20 22.91851016989804 25.362678589883338 32.888734627181734 18.83007661303689 21 19.513841629991596 20.373841980980313 35.47111460366549 24.6412017853626 22 21.10873435419051 21.13989435239657 33.41806460922282 24.333306684190102 23 22.8309189859546 19.4111969300187 35.51799109658624 22.239892987440456 24 24.50427718748842 17.77098766274664 32.52943917853041 25.195295971234525 25 18.331126654278066 18.98088476455482 36.11997574277987 26.568012838387244 26 17.855458946994855 17.677000684427995 36.81711732967785 27.650423038899298 27 21.41284657698255 20.5018748647231 34.92719909054924 23.158079467745114 28 22.74172885341736 21.574691373672337 31.153290421712942 24.53028935119736 29 22.93020979375513 18.3177110855886 35.999430618305624 22.75264850235065 30 25.1881592006817 18.06613017391491 32.01859460218354 24.727116023219853 31 28.248780801697226 18.297041750107734 31.127239259257816 22.326938188937227 32 25.096122159672568 17.43091859596714 30.419022028441784 27.05393721591851 33 22.167667309496 17.87909218718618 36.45477997882368 23.49846052449414 34 21.280133843696923 21.622230845278324 32.53938385880894 24.558251452215814 35 24.281828339218894 22.932120732318456 30.569869178705904 22.216181749756743 36 22.36028211692994 23.086906755947798 31.23830768840782 23.314503438714446 37 24.272936625087503 24.563477284205312 30.522992685785148 20.64059340492203 38 23.115180846935772 22.269376039560328 29.617714790469485 24.997728323034416 39 24.979827898533063 18.611566638132583 34.295146411042886 22.113459052291468 40 19.456006489391367 18.801685525810345 36.52002488120007 25.22228310359822 41 21.072504518979716 22.299288077888296 31.073459988261376 25.55474741487061 42 20.896113189960943 16.690527399544106 33.22318787450983 29.190171535985115 43 23.013394119379065 17.75671412164099 33.54496652932608 25.684925229653864 44 21.10850036171337 19.4993340964088 33.60393263356583 25.788232908311997 45 23.027433668007575 20.06079904531069 32.67389053441932 24.237876752262416 46 23.015227060450005 19.332692453937604 32.829807521688174 24.82227296392421 47 20.37368598599555 19.381206894198353 35.101406489781354 25.143700630024746 48 21.859616213338743 18.16776090648686 32.603653792530565 27.36896908764383 49 22.086432921181583 16.639361044542415 35.42345813582094 25.85074789845506 50 20.479723576887 17.091668502857633 36.62711543823866 25.8014924820167 51 18.9857986065748 16.16782720435538 36.18042379937485 28.66595038969497 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 725.0 1 4492.5 2 8260.0 3 70476.5 4 132693.0 5 76686.0 6 20679.0 7 18538.0 8 16397.0 9 15712.5 10 15028.0 11 14591.5 12 14155.0 13 13388.5 14 12622.0 15 11779.5 16 10937.0 17 10144.0 18 9351.0 19 9177.5 20 9004.0 21 8293.0 22 7582.0 23 7240.0 24 6898.0 25 6997.5 26 8482.5 27 9868.0 28 10168.5 29 10469.0 30 12630.5 31 14792.0 32 16638.0 33 18484.0 34 21573.0 35 24662.0 36 27606.0 37 30550.0 38 32429.5 39 34309.0 40 40571.5 41 46834.0 42 57381.5 43 67929.0 44 82447.0 45 96965.0 46 126919.0 47 156873.0 48 207805.5 49 258738.0 50 275763.0 51 292788.0 52 255694.0 53 218600.0 54 196110.0 55 173620.0 56 160295.5 57 146971.0 58 141535.5 59 136100.0 60 132821.0 61 129542.0 62 123921.5 63 118301.0 64 111025.5 65 103750.0 66 85126.0 67 66502.0 68 54258.0 69 42014.0 70 36097.5 71 30181.0 72 27731.5 73 25282.0 74 21787.0 75 14217.5 76 10143.0 77 7532.5 78 4922.0 79 3927.0 80 2932.0 81 2121.0 82 1310.0 83 917.5 84 525.0 85 378.0 86 231.0 87 187.5 88 144.0 89 129.5 90 115.0 91 61.0 92 7.0 93 6.0 94 5.0 95 5.5 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2564185.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.506863108327494 #Duplication Level Percentage of deduplicated Percentage of total 1 71.57435179023203 19.687858967611874 2 11.830318446742934 6.508299000849589 3 4.514242778425248 3.725179744316978 4 2.2846263851442052 2.51371620919339 5 1.3164628379918575 1.810588153592117 6 0.8982646283506315 1.4825065300256095 7 0.6486040165794676 1.2488743326893956 8 0.5142827502587229 1.1317044168272696 9 0.40376658088007966 0.9995716861187214 >10 5.312075435570497 33.52425989206213 >50 0.51900984723825 9.317802803430256 >100 0.17082266719889305 8.411839133791744 >500 0.007444950436283809 1.4257917241151787 >1k 0.004867852208339413 2.5478682295700916 >5k 4.295163713240659E-4 0.9049626568457269 >10k+ 4.295163713240659E-4 4.759176518959864 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96392 3.7591671427763593 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 13545 0.5282380171477488 No Hit CCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 10909 0.42543732219009156 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGCT 9372 0.36549624929558516 Illumina Single End Adapter 1 (95% over 22bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 7432 0.28983868168638377 No Hit GCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 6175 0.24081725772516416 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 4609 0.1797452211911387 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3407 0.1328687282703861 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 3218 0.1254979652404175 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCC 3140 0.12245606303757334 No Hit TGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2825 0.1101714579876257 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2704 0.10545260969859818 No Hit TCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTGC 2659 0.10369766612003423 Illumina Single End Adapter 1 (95% over 21bp) AGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2583 0.10073376140957069 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTC 2570 0.10022677770909665 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3767668869445847 0.0 2 0.0 0.0 0.0 1.2237026579595467 0.0 3 0.0 0.0 0.0 1.939485645536496 0.0 4 0.0 0.0 0.0 2.408913553429257 0.0 5 0.0 0.0 0.0 4.86380662861689 0.0 6 0.0 0.0 0.0 5.5903922688885554 0.0 7 0.0 0.0 0.0 7.9602290786351215 0.0 8 0.0 0.0 0.0 10.654418460446497 0.0 9 0.0 0.0 0.0 13.28929074930241 0.0 10 0.0 0.0 0.0 14.794798347233137 0.0 11 0.0 0.0 0.0 16.093534592862838 0.0 12 0.0 0.0 0.0 17.057895588656823 0.0 13 0.0 0.0 0.0 17.540271080284768 0.0 14 0.0 0.0 0.0 17.857759873020083 0.0 15 0.0 0.0 0.0 18.694828961248895 0.0 16 0.0 0.0 0.0 19.65536807991623 0.0 17 0.0 0.0 0.0 20.75992956826438 0.0 18 0.0 0.0 0.0 21.448647425985254 0.0 19 0.0 0.0 0.0 22.23283421438001 0.0 20 3.899874619030998E-5 0.0 0.0 23.072555217349763 0.0 21 3.899874619030998E-5 0.0 0.0 23.868909614555893 0.0 22 1.1699623857092994E-4 0.0 0.0 24.639095853068323 0.0 23 1.1699623857092994E-4 0.0 0.0 25.3290226719211 0.0 24 1.949937309515499E-4 0.0 0.0 25.920750647866672 0.0 25 1.949937309515499E-4 0.0 0.0 26.48042165444381 0.0 26 1.949937309515499E-4 0.0 0.0 27.0507393187309 0.0 27 1.949937309515499E-4 0.0 0.0 27.646601161772647 0.0 28 2.3399247714185988E-4 0.0 0.0 28.233688286921577 0.0 29 2.3399247714185988E-4 0.0 0.0 28.827756187638567 0.0 30 2.3399247714185988E-4 0.0 0.0 29.373231650602435 0.0 31 2.3399247714185988E-4 0.0 0.0 29.92401094304818 0.0 32 2.3399247714185988E-4 0.0 0.0 30.536018267012714 0.0 33 2.3399247714185988E-4 0.0 0.0 31.124938333232585 0.0 34 2.3399247714185988E-4 0.0 0.0 31.742132490440433 0.0 35 2.3399247714185988E-4 0.0 0.0 32.280588179090046 0.0 36 2.3399247714185988E-4 0.0 0.0 32.87145818261943 0.0 37 2.3399247714185988E-4 0.0 0.0 33.575814537562614 0.0 38 3.509887157127898E-4 0.0 0.0 34.378057745443485 0.0 39 3.509887157127898E-4 0.0 0.0 35.24004703248791 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCTACG 20 7.0349127E-4 45.0 39 ACGTAGG 310 0.0 45.0 1 CGCGTAT 20 7.0349127E-4 45.0 30 CGTTTTT 24905 0.0 44.241116 1 TCACGAC 320 0.0 42.890625 24 AATGCGG 390 0.0 42.115387 1 ACGGGTA 205 0.0 41.707314 4 ACTACGG 190 0.0 41.447372 1 CTTACGG 180 0.0 41.25 1 TATACGG 110 0.0 40.909092 1 CGCACTT 3615 0.0 40.829872 34 CACTTAC 3665 0.0 40.518417 36 GCGATAT 50 1.0822987E-9 40.500004 8 CCGCACT 3685 0.0 40.23745 33 GCACTTA 3680 0.0 40.23098 35 CATGCGG 560 0.0 40.178574 1 ACCCGCA 3730 0.0 40.11394 31 ACTTACT 3685 0.0 40.054276 37 ACCGGTA 135 0.0 40.0 41 CGGTCTA 310 0.0 39.919353 30 >>END_MODULE