##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043325_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1584187 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29058627548389 33.0 31.0 34.0 31.0 34.0 2 32.58031217274223 34.0 31.0 34.0 31.0 34.0 3 32.70048106694475 34.0 31.0 34.0 31.0 34.0 4 36.18917905525042 37.0 37.0 37.0 35.0 37.0 5 36.1686606442295 37.0 37.0 37.0 35.0 37.0 6 36.313494555882606 37.0 37.0 37.0 35.0 37.0 7 36.25112628749005 37.0 37.0 37.0 35.0 37.0 8 36.15635969743471 37.0 37.0 37.0 35.0 37.0 9 37.74987675066138 39.0 38.0 39.0 35.0 39.0 10 37.59334220013167 39.0 37.0 39.0 35.0 39.0 11 37.402734020668014 39.0 37.0 39.0 35.0 39.0 12 37.424513015193284 39.0 37.0 39.0 35.0 39.0 13 37.44451317931532 39.0 37.0 39.0 35.0 39.0 14 38.824924077776174 40.0 38.0 41.0 35.0 41.0 15 38.8990535839519 41.0 38.0 41.0 35.0 41.0 16 38.880784276098716 41.0 38.0 41.0 35.0 41.0 17 38.84264988918606 41.0 38.0 41.0 35.0 41.0 18 38.65699882652742 40.0 38.0 41.0 35.0 41.0 19 38.46117093499694 40.0 37.0 41.0 35.0 41.0 20 38.20352963381217 40.0 35.0 41.0 34.0 41.0 21 38.153635271593565 40.0 35.0 41.0 34.0 41.0 22 38.115054598983576 40.0 35.0 41.0 34.0 41.0 23 38.074157911913176 40.0 35.0 41.0 34.0 41.0 24 37.98861876786011 40.0 35.0 41.0 34.0 41.0 25 37.95150446254135 40.0 35.0 41.0 34.0 41.0 26 37.92046077893582 40.0 35.0 41.0 34.0 41.0 27 37.90529779628289 40.0 35.0 41.0 34.0 41.0 28 37.79358560573973 40.0 35.0 41.0 34.0 41.0 29 37.77843082918873 40.0 35.0 41.0 34.0 41.0 30 37.656507722888776 40.0 35.0 41.0 34.0 41.0 31 37.533239447110724 40.0 35.0 41.0 33.0 41.0 32 37.35206134124317 40.0 35.0 41.0 33.0 41.0 33 37.045564696592 40.0 35.0 41.0 33.0 41.0 34 36.82765481600342 40.0 35.0 41.0 32.0 41.0 35 36.675252353415345 39.0 35.0 41.0 31.0 41.0 36 36.578994146524366 39.0 35.0 41.0 31.0 41.0 37 36.439184894207564 39.0 35.0 41.0 31.0 41.0 38 36.35536903156004 39.0 35.0 41.0 31.0 41.0 39 36.23276355632258 39.0 35.0 41.0 31.0 41.0 40 36.096440634849294 39.0 35.0 41.0 30.0 41.0 41 36.01221762329826 39.0 35.0 41.0 30.0 41.0 42 35.89765917786221 38.0 35.0 41.0 30.0 41.0 43 35.76552768075991 38.0 35.0 40.0 29.0 41.0 44 35.634184600681614 38.0 35.0 40.0 29.0 41.0 45 35.57122359923418 38.0 35.0 40.0 29.0 41.0 46 35.4698157477621 38.0 35.0 40.0 29.0 41.0 47 35.30144547329324 37.0 35.0 40.0 28.0 41.0 48 35.22156917081127 37.0 35.0 40.0 28.0 41.0 49 35.13097633044584 37.0 35.0 40.0 28.0 41.0 50 35.00106553077383 36.0 35.0 40.0 28.0 41.0 51 34.481703864505896 36.0 34.0 39.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 1.0 12 1.0 13 7.0 14 15.0 15 15.0 16 49.0 17 108.0 18 254.0 19 539.0 20 979.0 21 1705.0 22 2560.0 23 4005.0 24 6502.0 25 11462.0 26 17763.0 27 23021.0 28 24070.0 29 24293.0 30 25040.0 31 28004.0 32 33209.0 33 43987.0 34 88592.0 35 143436.0 36 139999.0 37 152099.0 38 250815.0 39 561578.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.72662886389044 16.991175915469576 22.553776795289952 27.72841842535004 2 34.4379167358399 19.824237921407008 24.27270265442148 21.465142688331618 3 27.201902300675364 20.66233342402128 32.21803991574227 19.917724359561088 4 23.700042987349345 24.109590597574655 30.110649815962383 22.079716599113613 5 22.043609750616564 32.44768452209241 27.227783083688983 18.28092264360205 6 78.58832322194287 2.2457576031112487 16.136794456715023 3.0291247182308654 7 78.05732530313657 2.2687346885184643 14.63596153736901 5.037978470975965 8 67.61815366493981 4.033362223020388 20.92076251099144 7.42772160104836 9 37.77982018536953 17.401670383610014 25.406280950418104 19.41222848060235 10 25.610423516920665 17.591610081385596 36.30373181953898 20.494234582154757 11 22.81454146511744 14.987308947744173 39.01717410886467 23.180975478273712 12 20.237509839431837 16.668107994826368 42.16661290617837 20.927769259563423 13 16.87793170881973 21.164546862207555 41.3378597349934 20.61966169397931 14 15.287841650007227 19.640294990427268 42.42384263978936 22.648020719776138 15 17.48240580184031 16.146010540422314 43.2837789983127 23.087804659424677 16 17.840949332370485 19.67293002656883 37.77855770814935 24.70756293291133 17 18.279533918659855 20.39348889998466 37.98692957333951 23.340047608015972 18 20.755251747426282 24.799029407513128 34.96929339781225 19.476425447248335 19 21.810745827354978 20.147810832938283 33.64306107801667 24.398382261690067 20 20.178552153249584 24.643555337848372 35.32455448756996 19.85333802133208 21 19.395563781296023 19.80668948804655 34.74823363655932 26.04951309409811 22 18.662001392512373 22.756720008433348 32.533154229898365 26.04812436915591 23 18.692616465101658 20.911041436396083 37.690310550459 22.706031548043253 24 22.75974995376177 19.4804653743529 34.69704018528116 23.06274448660417 25 17.475840920295393 22.28922469380193 35.37461170934997 24.860322676552705 26 18.59843566447648 20.74944435221347 34.77682874559632 25.875291237713725 27 22.58281377135401 21.186008974950557 35.31312906872736 20.918048184968065 28 20.056218110614466 22.95234085369972 33.04104881557544 23.950392220110377 29 22.112162263672154 20.952198193773842 33.62273519477183 23.312904347782172 30 22.911436591765995 23.284182991023155 30.444890660004155 23.359489757206696 31 24.03933374027182 23.306402590098266 29.389585951658486 23.264677717971427 32 23.399510285086293 22.055918903513287 30.217518512650337 24.327052298750086 33 20.09554427602297 24.53542416394024 30.85753133941889 24.511500220617894 34 20.456170893966434 25.517378945793645 31.520142508428613 22.50630765181131 35 22.11550782830562 23.54097085760709 30.20337876778436 24.140142546302933 36 22.591398616451215 24.214123711405282 29.572518900862082 23.62195877128142 37 20.09346118860968 26.29108811017891 30.274329987558286 23.341120713653122 38 20.478642988485575 22.872741664967585 28.51254302680176 28.136072319745082 39 24.047287346758935 20.253480176267068 32.54331717152078 23.155915305453206 40 20.63361206726226 20.31452094986261 33.98683362507078 25.06503335780435 41 22.218652217194055 25.2440526276254 28.307390478523054 24.22990467665749 42 21.214288464682515 20.664227139851548 32.372377755908865 25.749106639557073 43 23.233936397660123 21.31686473882187 32.74947970157564 22.699719161942372 44 20.53191952717703 22.553145556679862 33.20346650995116 23.711468406191948 45 21.98162211910589 21.984020825824224 31.40412085189438 24.63023620317551 46 23.43555400972234 21.790924934998205 30.733682324119567 24.039838731159897 47 20.382063481142062 22.379302443461533 33.08245806839723 24.156176006999175 48 21.87891959724452 20.049211362042485 30.550875622637985 27.52099341807501 49 20.79596663777698 19.089349931542174 34.96727343425997 25.147409996420876 50 20.56985696764334 19.33338677820232 34.962476020823296 25.13428023333104 51 19.872275179634727 17.920927264268673 33.961268461362195 28.245529094734394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 2922.0 2 5611.0 3 41471.0 4 77331.0 5 44404.0 6 11477.0 7 10572.0 8 9667.0 9 9498.0 10 9329.0 11 9087.0 12 8845.0 13 8603.0 14 8361.0 15 7857.0 16 7353.0 17 7057.0 18 6761.0 19 6417.5 20 6074.0 21 5825.0 22 5576.0 23 5415.0 24 5254.0 25 5665.0 26 7004.0 27 7932.0 28 9239.0 29 10546.0 30 11904.0 31 13262.0 32 15473.5 33 17685.0 34 19463.5 35 21242.0 36 23093.5 37 24945.0 38 28611.0 39 32277.0 40 36156.5 41 40036.0 42 47815.5 43 55595.0 44 66344.0 45 77093.0 46 96821.0 47 116549.0 48 147377.5 49 178206.0 50 182611.5 51 187017.0 52 156960.0 53 126903.0 54 109147.0 55 91391.0 56 83168.0 57 74945.0 58 71373.0 59 67801.0 60 64431.5 61 61062.0 62 56949.5 63 52837.0 64 50613.5 65 48390.0 66 40935.0 67 33480.0 68 28127.0 69 22774.0 70 19839.5 71 16905.0 72 16388.5 73 15872.0 74 13147.0 75 7778.5 76 5135.0 77 3862.0 78 2589.0 79 1928.5 80 1268.0 81 1185.0 82 1102.0 83 753.5 84 405.0 85 388.5 86 372.0 87 240.5 88 109.0 89 67.5 90 26.0 91 27.0 92 28.0 93 24.0 94 20.0 95 19.0 96 18.0 97 9.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1584187.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.1423899765234 #Duplication Level Percentage of deduplicated Percentage of total 1 72.3633536703992 20.364777190014603 2 11.425671552342804 6.430914091394015 3 4.481318030438297 3.78344998864261 4 2.2161317715835427 2.49468978221071 5 1.3300486520121622 1.8715373926337768 6 0.8703968511828342 1.4697028572195192 7 0.6252324705873399 1.2316875209277882 8 0.4727227368860105 1.064283808977246 9 0.36935791829718456 0.9355153119872613 >10 5.12907608619378 34.268590767670595 >50 0.5802674571492635 10.631687886004729 >100 0.1244121581497414 6.275665460031235 >500 0.006571862236953531 1.2846864475581579 >1k 0.004305702844900589 2.142589649134426 >5k 9.064637568211767E-4 1.7807932721984931 >10k+ 2.2661593920529418E-4 3.9694285733949224 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 62241 3.92889223305077 No Hit GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 9766 0.6164676266122623 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 6472 0.40853762844916663 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 6421 0.4053183115377162 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 5264 0.3322840043504965 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 4697 0.29649277515848826 No Hit CGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 2735 0.17264375985915803 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 2484 0.15679967074594098 No Hit GTGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2431 0.15345410611247282 No Hit GAGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATTC 2037 0.12858330487499264 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCC 1967 0.12416463460437435 No Hit GCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 1740 0.1098355181553693 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.42040491431882726 0.0 2 0.0 0.0 0.0 1.3425813997968674 0.0 3 0.0 0.0 0.0 2.1375001814811005 0.0 4 0.0 0.0 0.0 2.716030367627054 0.0 5 0.0 0.0 0.0 5.435153804443541 0.0 6 0.0 0.0 0.0 6.087223288664785 0.0 7 0.0 0.0 0.0 8.463079169315238 0.0 8 0.0 0.0 0.0 11.076659510524957 0.0 9 0.0 0.0 0.0 13.426129617273718 0.0 10 0.0 0.0 0.0 14.832971107577578 0.0 11 0.0 0.0 0.0 16.13969815432143 0.0 12 0.0 0.0 0.0 17.12670284505554 0.0 13 0.0 0.0 0.0 17.593251301771822 0.0 14 0.0 0.0 0.0 17.904767555850412 0.0 15 0.0 0.0 0.0 18.97812568844461 0.0 16 0.0 0.0 0.0 20.08039454938085 0.0 17 0.0 0.0 0.0 21.459398416979813 0.0 18 0.0 0.0 0.0 22.17307678954568 0.0 19 0.0 0.0 0.0 22.97885287532343 0.0 20 6.312386100883293E-5 0.0 0.0 23.893770116785454 0.0 21 6.312386100883293E-5 0.0 0.0 24.719998333530068 0.0 22 3.7874316605299754E-4 0.0 0.0 25.57570539336581 0.0 23 3.7874316605299754E-4 0.0 0.0 26.30036731774721 0.0 24 5.681147490794963E-4 0.0 0.0 26.859329106980425 0.0 25 6.312386100883293E-4 0.0 0.0 27.417975276908596 0.0 26 6.312386100883293E-4 0.0 0.0 27.95938863278136 0.0 27 6.943624710971622E-4 0.0 0.0 28.5514273251832 0.0 28 6.943624710971622E-4 0.0 0.0 29.159878221447343 0.0 29 6.943624710971622E-4 0.0 0.0 29.76365795199683 0.0 30 6.943624710971622E-4 0.0 0.0 30.357842855672974 0.0 31 6.943624710971622E-4 0.0 0.0 30.91017663950026 0.0 32 6.943624710971622E-4 0.0 0.0 31.494072353831964 0.0 33 6.943624710971622E-4 0.0 0.0 32.03416010862354 0.0 34 6.943624710971622E-4 0.0 0.0 32.66445186079674 0.0 35 6.943624710971622E-4 0.0 0.0 33.174618905470126 0.0 36 6.943624710971622E-4 0.0 0.0 33.729730139181804 0.0 37 6.943624710971622E-4 0.0 0.0 34.269249779224296 0.0 38 6.943624710971622E-4 0.0 0.0 34.853902979888105 0.0 39 6.943624710971622E-4 0.0 0.0 35.489939003413106 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATCG 40 6.8175723E-9 45.000004 8 TACGCTA 25 3.8914768E-5 45.0 37 ACGCTAT 25 3.8914768E-5 45.0 38 GCGATAA 25 3.8914768E-5 45.0 8 CCGGTTA 25 3.8914768E-5 45.0 29 CGATACG 25 3.8914768E-5 45.0 9 CGTTTTT 14605 0.0 43.937008 1 ACGGGAT 165 0.0 43.636364 4 ACTACGG 120 0.0 43.124996 1 TAGTAGG 315 0.0 42.142857 1 ATAACGG 65 0.0 41.538464 1 ACGTAGG 125 0.0 41.399998 1 TACGGGA 305 0.0 41.311478 3 TAACGGG 415 0.0 41.20482 2 TACGCGG 170 0.0 41.02941 1 ACGATAC 55 6.184564E-11 40.90909 44 AGGGTAC 545 0.0 40.458714 5 CGTAGGG 685 0.0 40.401463 2 ATCGCCA 95 0.0 40.26316 23 GTTGATC 1040 0.0 40.240387 15 >>END_MODULE