##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043324_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2256627 Sequences flagged as poor quality 0 Sequence length 52 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.29278742122646 33.0 31.0 34.0 31.0 34.0 2 32.62308923893936 34.0 31.0 34.0 31.0 34.0 3 32.691633132103796 34.0 31.0 34.0 31.0 34.0 4 36.2015720808091 37.0 35.0 37.0 35.0 37.0 5 36.098193011073604 37.0 35.0 37.0 35.0 37.0 6 36.34123539246849 37.0 37.0 37.0 35.0 37.0 7 36.26932142529537 37.0 37.0 37.0 35.0 37.0 8 36.2456068282441 37.0 37.0 37.0 35.0 37.0 9 37.82654510470716 39.0 38.0 39.0 35.0 39.0 10 37.60846785933165 39.0 37.0 39.0 35.0 39.0 11 37.49455714214179 39.0 37.0 39.0 35.0 39.0 12 37.55445849048159 39.0 37.0 39.0 35.0 39.0 13 37.54370438712291 39.0 37.0 39.0 35.0 39.0 14 38.91738156106437 40.0 38.0 41.0 35.0 41.0 15 38.99257298614259 41.0 38.0 41.0 35.0 41.0 16 39.023840005459476 41.0 38.0 41.0 35.0 41.0 17 38.98412453631016 41.0 38.0 41.0 35.0 41.0 18 38.744883403415805 40.0 38.0 41.0 35.0 41.0 19 38.503635735990045 40.0 37.0 41.0 35.0 41.0 20 38.14980942796483 40.0 35.0 41.0 34.0 41.0 21 38.122901569466286 40.0 35.0 41.0 34.0 41.0 22 38.09971873951699 40.0 35.0 41.0 34.0 41.0 23 38.09437669583853 40.0 35.0 41.0 34.0 41.0 24 38.02472717024125 40.0 35.0 41.0 34.0 41.0 25 37.95561384313845 40.0 35.0 41.0 34.0 41.0 26 37.9060500472608 40.0 35.0 41.0 34.0 41.0 27 37.93488467522546 40.0 35.0 41.0 34.0 41.0 28 37.92934853655478 40.0 35.0 41.0 34.0 41.0 29 37.86758866219362 40.0 35.0 41.0 34.0 41.0 30 37.76119934752177 40.0 35.0 41.0 34.0 41.0 31 37.57788416074079 40.0 35.0 41.0 33.0 41.0 32 37.354155560489176 40.0 35.0 41.0 33.0 41.0 33 36.959949074437205 40.0 35.0 41.0 32.0 41.0 34 36.731929999951255 40.0 35.0 41.0 31.0 41.0 35 36.59120049525243 40.0 35.0 41.0 30.0 41.0 36 36.49415078344804 40.0 35.0 41.0 30.0 41.0 37 36.431606109472234 40.0 35.0 41.0 30.0 41.0 38 36.39019829152093 40.0 35.0 41.0 30.0 41.0 39 36.41326546212555 40.0 35.0 41.0 30.0 41.0 40 36.39726591944526 40.0 35.0 41.0 30.0 41.0 41 36.36041977695029 40.0 35.0 41.0 30.0 41.0 42 36.281581315831104 40.0 35.0 41.0 30.0 41.0 43 36.18536160384503 40.0 35.0 41.0 30.0 41.0 44 36.04419649326184 39.0 35.0 41.0 29.0 41.0 45 35.967345068547 39.0 35.0 41.0 28.0 41.0 46 35.9466287516723 39.0 35.0 41.0 28.0 41.0 47 35.87772591571403 39.0 35.0 41.0 28.0 41.0 48 35.826653230684556 39.0 35.0 41.0 27.0 41.0 49 35.80630161741396 39.0 35.0 41.0 27.0 41.0 50 35.708229140216794 39.0 35.0 41.0 27.0 41.0 51 35.62726272441125 39.0 35.0 41.0 26.0 41.0 52 35.272115418276925 38.0 35.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 2.0 14 4.0 15 17.0 16 71.0 17 123.0 18 338.0 19 680.0 20 1299.0 21 2334.0 22 3929.0 23 6912.0 24 12972.0 25 24626.0 26 35105.0 27 36602.0 28 33766.0 29 31823.0 30 32836.0 31 37903.0 32 46063.0 33 59760.0 34 101574.0 35 154078.0 36 201182.0 37 178531.0 38 290978.0 39 960724.0 40 2393.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.93561098045889 18.263053663720232 25.742313638895574 30.059021716925304 2 34.952475530958374 18.89031727440999 25.293901030165816 20.86330616446582 3 21.006307200968525 20.82368951536962 38.85923548730029 19.31076779636156 4 22.84081507488832 22.749129563724978 36.050175771184165 18.359879590202546 5 20.5339207587253 27.931997623001052 32.289075686854765 19.24500593141888 6 71.62264742910548 1.3836136853808805 22.664888791989103 4.328850093524538 7 71.89287374475268 1.2230643345134133 19.264016605314037 7.620045315419873 8 60.39185917743606 3.672250664376523 26.87280618374237 9.063083974445044 9 29.939728630385083 25.565102252166618 28.734212610236426 15.760956507211871 10 19.393767778192853 18.869090904256662 47.98861309378998 13.748528223760506 11 18.304044044496496 16.279916884801963 43.84317833651729 21.57286073418425 12 18.031513404740792 17.098217826871696 46.807646988181915 18.06262178020559 13 14.396397809651306 21.37047903796241 44.52658769038924 19.706535461997042 14 12.865263067401036 22.625803909994875 45.00748240626386 19.501450616340225 15 13.490399609682946 21.74413405494129 45.47920413962963 19.28626219574613 16 14.116732627944273 24.861485748420098 40.85912292993038 20.16265869370525 17 13.646295998408245 21.977358243076946 42.53706970624742 21.83927605226739 18 14.991312254971689 27.433953418088148 41.67423326938834 15.900501057551825 19 15.391555627048689 23.387959108882416 38.75824405185261 22.462241212216284 20 13.643326965422286 28.469259651683686 38.46289174063769 19.42452164225634 21 14.315126070901393 23.351533062397994 39.603975313598575 22.729365553102042 22 13.253851877160027 25.43291381340381 35.619577360370144 25.693656949066018 23 12.218988782816123 22.87936818978059 41.939452111492066 22.962190915911226 24 17.060240793006553 21.54560767020868 38.76644212800786 22.627709408776905 25 12.826798580359094 23.76994514379204 40.226541648220994 23.17671462762787 26 14.02354044332537 22.22538328221722 39.849518772929684 23.901557501527723 27 18.120805963945305 24.235906066886553 39.078810986485585 18.564476982682564 28 15.360358623733564 25.054916031758907 35.4803873214315 24.104338023076032 29 17.163669494338233 22.744476601582804 38.128011408176896 21.96384249590207 30 18.344192460694657 25.33125766907867 33.558315131388575 22.766234738838097 31 16.63026277714483 25.027042572831043 35.42663453020814 22.916060119815988 32 17.634460635275566 24.207899666183202 35.57801089856675 22.579628799974476 33 12.874613305610541 25.59962279986901 40.88057086970952 20.645193024810922 34 15.572267813865562 25.674291763769556 34.83650598880541 23.91693443355947 35 17.892190424026655 23.40634938782528 36.05132793323841 22.65013225490965 36 17.16065614742711 22.489715845817674 38.83512871201133 21.51449929474388 37 15.139276451092714 23.387560283555946 37.51058548887344 23.962577776477904 38 14.934280233286229 20.72172317356834 36.23367973528634 28.110316857859097 39 19.231977637420805 18.41177119656904 40.38474236105479 21.971508804955363 40 14.446118033684789 18.10631531041683 42.50675898143557 24.940807674462814 41 17.32949220230016 22.58281940258625 34.19271328402966 25.894975111083934 42 18.122224009550536 19.828753267598056 37.90081391386348 24.148208808987928 43 21.543170404324684 21.63512179903901 36.88084029837452 19.940867498261785 44 17.358828020758416 21.52579934566058 37.26929616635802 23.846076467222986 45 17.86560206892854 20.679093177561022 36.2083321700928 25.246972583417644 46 20.548012586927303 18.785116016071772 36.22720990221246 24.43966149478846 47 15.994180695347527 18.28122237303728 39.39406025009893 26.330536681516264 48 17.249638509155478 16.633320437981112 35.90114804085921 30.215893012004198 49 18.8652799066926 15.949911084109159 40.21338041244743 24.971428596750815 50 18.18213643637163 14.679962616772732 40.09927205515134 27.038628891704303 51 15.770218117571048 15.127710516625035 38.68893707289685 30.413134292907067 52 14.016361587448877 15.211197951633123 46.45118577416649 24.32125468675151 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 500.0 1 2253.0 2 4006.0 3 69645.5 4 135285.0 5 77052.5 6 18820.0 7 17938.5 8 17057.0 9 17487.0 10 17917.0 11 18135.5 12 18354.0 13 18018.0 14 16883.5 15 16085.0 16 15092.0 17 14099.0 18 13308.0 19 12517.0 20 12085.5 21 11654.0 22 11757.0 23 11860.0 24 12343.5 25 12827.0 26 13948.5 27 15070.0 28 17025.5 29 18981.0 30 20535.0 31 22089.0 32 24854.0 33 27619.0 34 31040.0 35 34461.0 36 39879.0 37 45297.0 38 49985.0 39 64865.5 40 75058.0 41 99785.5 42 124513.0 43 164769.0 44 205025.0 45 267503.0 46 329981.0 47 336542.5 48 343104.0 49 295018.5 50 246933.0 51 196252.0 52 145571.0 53 114058.0 54 82545.0 55 65869.5 56 49194.0 57 41720.5 58 34247.0 59 29553.0 60 24859.0 61 22716.0 62 20573.0 63 18639.0 64 14615.5 65 12526.0 66 10067.0 67 7608.0 68 5737.5 69 3867.0 70 3144.5 71 2422.0 72 2242.5 73 2063.0 74 1767.5 75 1472.0 76 1096.0 77 720.0 78 572.0 79 424.0 80 303.0 81 182.0 82 142.0 83 102.0 84 69.5 85 37.0 86 26.5 87 16.0 88 13.0 89 8.5 90 7.0 91 6.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2256627.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.53813975194442 #Duplication Level Percentage of deduplicated Percentage of total 1 71.92845854658675 24.12346694877367 2 12.731208955520646 8.539621303229154 3 5.252747878663579 5.2850217730904605 4 2.572822354610822 3.4515070274345776 5 1.4880567886173373 2.4953328267738932 6 1.012015518929681 2.0364670743000115 7 0.6835387800790013 1.6047233392514202 8 0.5170968155723338 1.3873972212760286 9 0.40352968799436795 1.2180271563012275 >10 3.0480159924382706 19.318264048480106 >50 0.1862002339531528 4.318684529260981 >100 0.15810704054667074 10.611165608323446 >500 0.012089985331085667 2.7056363136159898 >1k 0.0045171373764495894 2.9482533177930432 >5k 7.971418899616922E-4 1.6509541301686315 >10k+ 7.971418899616922E-4 8.30547738192736 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 110587 4.9005440420592326 No Hit CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCTT 22502 0.99715194402974 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 20169 0.8937675566232258 No Hit GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 12031 0.5331408336424229 No Hit CGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 10902 0.48311041213279815 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCG 10207 0.45231223414414523 No Hit CGTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCT 8178 0.36239927998734395 No Hit TCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 6745 0.2988974252280062 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 6153 0.2726635815311968 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTT 5676 0.25152583922819327 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCT 5235 0.23198339823107672 No Hit CGTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 5065 0.22445003095327676 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCC 4336 0.19214517950906373 No Hit ACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 4228 0.18735927559140256 No Hit GCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3968 0.1758376550488849 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGT 3737 0.16560113833610962 No Hit ACTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 3586 0.15890973563641664 No Hit TCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3475 0.15399088994326487 No Hit AGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3184 0.14109553772067782 No Hit TGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCTTG 3076 0.1363096338030166 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTC 3041 0.1347586464222931 No Hit TGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 2664 0.11805229663564248 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.0467392262877295 0.0 2 0.0 0.0 0.0 3.0225642075540176 0.0 3 0.0 0.0 0.0 4.835624141694662 0.0 4 0.0 0.0 0.0 6.011981599085715 0.0 5 0.0 0.0 0.0 10.727204806111068 0.0 6 0.0 0.0 0.0 12.175694077931356 0.0 7 4.431392516352946E-5 0.0 0.0 16.355915266457416 0.0 8 4.431392516352946E-5 0.0 0.0 21.166014587257884 0.0 9 8.862785032705892E-5 0.0 0.0 24.930216646348732 0.0 10 8.862785032705892E-5 0.0 0.0 27.2909966955106 0.0 11 8.862785032705892E-5 0.0 0.0 29.857925124533207 0.0 12 8.862785032705892E-5 0.0 0.0 31.685608653977816 0.0 13 8.862785032705892E-5 0.0 0.0 32.496686426245894 0.0 14 8.862785032705892E-5 0.0 0.0 33.05566227825866 0.0 15 8.862785032705892E-5 0.0 0.0 34.52590968733424 0.0 16 8.862785032705892E-5 0.0 0.0 36.33391783400624 0.0 17 8.862785032705892E-5 0.0 0.0 38.50233113403323 0.0 18 8.862785032705892E-5 0.0 0.0 39.78056630537524 0.0 19 8.862785032705892E-5 0.0 0.0 41.09629105740559 0.0 20 1.7725570065411784E-4 0.0 0.0 42.43621121257523 0.0 21 2.2156962581764732E-4 0.0 0.0 43.75796265842782 0.0 22 4.4313925163529463E-4 0.0 0.0 44.99884119085697 0.0 23 4.4313925163529463E-4 0.0 0.0 45.981591109208566 0.0 24 7.090228026164713E-4 0.0 0.0 46.768872303663834 0.0 25 7.090228026164713E-4 0.0 0.0 47.55123465242595 0.0 26 7.533367277800008E-4 0.0 0.0 48.32021419578867 0.0 27 8.419645781070598E-4 0.0 0.0 49.061275966298375 0.0 28 8.419645781070598E-4 0.0 0.0 49.83619357563301 0.0 29 8.419645781070598E-4 0.0 0.0 50.686311915970165 0.0 30 8.419645781070598E-4 0.0 0.0 51.44576396542273 0.0 31 8.419645781070598E-4 0.0 0.0 52.13533295489241 0.0 32 8.862785032705893E-4 0.0 0.0 52.78400019143616 0.0 33 8.862785032705893E-4 0.0 0.0 53.42061404033542 0.0 34 9.305924284341187E-4 0.0 0.0 54.10517555626162 0.0 35 9.305924284341187E-4 0.0 0.0 54.73527525816185 0.0 36 9.305924284341187E-4 0.0 0.0 55.40667553831448 0.0 37 9.305924284341187E-4 0.0 0.0 56.048429802532716 0.0 38 9.305924284341187E-4 0.0 0.0 56.724039905575886 0.0 39 9.305924284341187E-4 0.0 0.0 57.34864468075584 0.0 40 9.305924284341187E-4 0.0 0.0 57.95645447829881 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGGTA 20 6.312753E-4 46.0 3 TCCGTAC 20 6.312753E-4 46.0 46 CGTTTTT 30680 0.0 45.67014 1 ATTGCGG 370 0.0 44.756756 1 TGAACGG 160 0.0 44.5625 1 TACGCGG 265 0.0 44.264153 1 CCCGCAC 125 0.0 44.16 32 ACCCGCA 120 0.0 44.083332 31 AGTACGG 115 0.0 44.0 1 TCTACGG 225 0.0 43.955555 1 GTAGCGG 370 0.0 43.513515 1 AATGCGG 245 0.0 43.183674 1 ACGTAGG 155 0.0 43.032257 1 GCGAAGG 360 0.0 42.805557 1 ACTGCGG 285 0.0 42.77193 1 CCGCACT 125 0.0 42.32 33 GCGATAC 120 0.0 42.166668 8 GCGTAGG 415 0.0 42.12048 1 CTAGCGG 405 0.0 42.024693 1 TAAGCGG 460 0.0 42.0 1 >>END_MODULE