##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043323_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2242950 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21553266902963 33.0 31.0 34.0 31.0 34.0 2 32.514806839207296 34.0 31.0 34.0 31.0 34.0 3 32.580737421699105 34.0 31.0 34.0 31.0 34.0 4 36.14823379923761 37.0 35.0 37.0 35.0 37.0 5 36.10192113065383 37.0 35.0 37.0 35.0 37.0 6 36.33597717291959 37.0 37.0 37.0 35.0 37.0 7 36.27849171849573 37.0 37.0 37.0 35.0 37.0 8 36.17686484317528 37.0 37.0 37.0 35.0 37.0 9 37.76210882988921 39.0 38.0 39.0 35.0 39.0 10 37.55003276934394 39.0 37.0 39.0 35.0 39.0 11 37.47706903854299 39.0 37.0 39.0 35.0 39.0 12 37.55069930225819 39.0 37.0 39.0 35.0 39.0 13 37.55241311665441 39.0 37.0 39.0 35.0 39.0 14 38.91507612742148 40.0 38.0 41.0 35.0 41.0 15 38.9974992755077 41.0 38.0 41.0 35.0 41.0 16 39.05499632180833 41.0 38.0 41.0 35.0 41.0 17 38.992408658240265 41.0 38.0 41.0 35.0 41.0 18 38.78558238034731 40.0 38.0 41.0 35.0 41.0 19 38.5682899752558 40.0 37.0 41.0 35.0 41.0 20 38.24689716667781 40.0 35.0 41.0 35.0 41.0 21 38.21939499320092 40.0 35.0 41.0 35.0 41.0 22 38.20625381751711 40.0 35.0 41.0 35.0 41.0 23 38.17465391560222 40.0 35.0 41.0 35.0 41.0 24 38.11281259056154 40.0 35.0 41.0 34.0 41.0 25 38.10269154461758 40.0 35.0 41.0 34.0 41.0 26 38.09870839742304 40.0 35.0 41.0 34.0 41.0 27 38.08557212599479 40.0 35.0 41.0 35.0 41.0 28 38.0145433469315 40.0 35.0 41.0 34.0 41.0 29 38.00014891103235 40.0 35.0 41.0 34.0 41.0 30 37.84725428565059 40.0 35.0 41.0 34.0 41.0 31 37.6625729508014 40.0 35.0 41.0 34.0 41.0 32 37.450199068191445 40.0 35.0 41.0 33.0 41.0 33 37.04529525847656 40.0 35.0 41.0 32.0 41.0 34 36.777047192313695 40.0 35.0 41.0 31.0 41.0 35 36.63250852671705 40.0 35.0 41.0 31.0 41.0 36 36.53153079649569 40.0 35.0 41.0 30.0 41.0 37 36.42847901201542 40.0 35.0 41.0 30.0 41.0 38 36.38145522637598 40.0 35.0 41.0 30.0 41.0 39 36.35811810339062 40.0 35.0 41.0 30.0 41.0 40 36.31484651909316 40.0 35.0 41.0 30.0 41.0 41 36.23878686551194 40.0 35.0 41.0 30.0 41.0 42 36.140937604494084 39.0 35.0 41.0 29.0 41.0 43 36.02935330702869 39.0 35.0 41.0 29.0 41.0 44 35.9505459328117 39.0 35.0 41.0 29.0 41.0 45 35.90230098753873 39.0 35.0 41.0 28.0 41.0 46 35.82026705900711 39.0 35.0 41.0 27.0 41.0 47 35.69499810517399 39.0 35.0 41.0 27.0 41.0 48 35.67494950845984 39.0 35.0 41.0 27.0 41.0 49 35.643202478878266 39.0 35.0 41.0 27.0 41.0 50 35.568934216099336 39.0 35.0 40.0 26.0 41.0 51 35.12317483671058 38.0 35.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 0.0 11 1.0 12 0.0 13 5.0 14 10.0 15 13.0 16 42.0 17 106.0 18 263.0 19 577.0 20 1078.0 21 2027.0 22 3311.0 23 5453.0 24 10554.0 25 20616.0 26 32546.0 27 37214.0 28 35562.0 29 33287.0 30 33792.0 31 38386.0 32 46506.0 33 59636.0 34 102378.0 35 154579.0 36 193555.0 37 181616.0 38 313968.0 39 935587.0 40 280.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.34369914621369 18.326846340756592 25.881227847254735 29.448226665774985 2 34.65792817494817 18.916783700037897 25.404712543748186 21.020575581265742 3 21.23814619139972 20.882988920840855 38.355424775407386 19.523440112352038 4 23.02494482712499 23.002206915000333 35.45571680153369 18.51713145634098 5 20.74981609041664 28.026393811721174 31.750061303194453 19.473728794667736 6 72.14516596446644 1.3361867183842708 22.13937002608172 4.3792772910675675 7 72.42533270915536 1.1786263626028222 18.717804676876433 7.678236251365389 8 60.6703671504046 3.615907621658976 26.465458436434158 9.248266791502264 9 30.149312289618585 25.589647562362067 28.23732138478343 16.023718763235916 10 19.665574355201855 18.865066095989658 47.61158295994115 13.85777658886734 11 18.454535321786043 16.245792371653405 43.531420673666375 21.768251632894177 12 18.242270224481153 17.004926547627008 46.513163467754524 18.23963976013732 13 14.472547314920083 21.347332753739494 44.2733007869101 19.906819144430326 14 12.943088343476225 22.645310862926056 44.70946744243073 19.70213335116699 15 13.5414966896275 21.623843598831897 45.30631534363227 19.528344367908335 16 14.129561514969124 24.87126329164716 40.626050513832226 20.373124679551484 17 13.759646893599948 21.953810829487953 42.222519449831694 22.064022827080407 18 15.103100827035822 27.52312802336209 41.383178403441896 15.990592746160189 19 15.489511580730733 23.38139503778506 38.419759691477736 22.709333690006464 20 13.656256269644887 28.646247129895897 38.036068570409505 19.66142803004971 21 14.34017699904144 23.356383334447937 39.21821708018458 23.085222586326044 22 13.245948416148376 25.435341848904347 35.23038855079248 26.088321184154793 23 12.261753494282084 22.87821841770882 41.631378318732025 23.22864976927707 24 17.12476871976638 21.560266613165695 38.46501259501996 22.849952072047973 25 12.763637174257116 23.76825163289418 40.0200628636394 23.4480483292093 26 14.129695267393389 22.082257740921555 39.579259457411 24.20878753427406 27 18.38137274571435 24.166833857196995 38.727345683140506 18.724447713948148 28 15.436857709712656 25.10359125259145 35.066363494505005 24.393187543190887 29 17.33315499676765 22.745179339708866 37.6765420539914 22.24512360953209 30 18.49470563320627 25.347644842729437 33.04300140440046 23.114648119663837 31 16.789941817695446 25.040460108339463 34.95468022024566 23.214917853719435 32 17.7403419603647 24.15167524911389 35.22111504937694 22.886867741144474 33 12.886733988720211 25.628837022671036 40.5549388082659 20.929490180342853 34 15.823402215831827 25.601952785394232 34.44263135602666 24.132013642747275 35 18.059921086069686 23.312200450299827 35.82197552330636 22.805902940324128 36 17.279743195345414 22.320381640250563 38.67522682181948 21.724648342584544 37 15.301946097773023 23.06903854299026 37.39160480617045 24.237410553066276 38 15.074210303395082 20.478566174011902 35.90949419291558 28.537729329677436 39 19.403018346374196 18.096970507590452 40.205978733364546 22.294032412670813 40 14.486591319467665 17.787868655119375 42.535277201899284 25.190262823513677 41 17.454958871129538 22.400410174101072 34.02648298000401 26.118147974765378 42 18.263848948928864 19.614168840143563 37.78425733966428 24.33772487126329 43 21.756213914710536 21.385942620209992 36.7779040995118 20.079939365567668 44 17.476715932142938 21.293118437771685 37.24840054392652 23.981765086158855 45 18.018101161416883 20.33357854611115 36.13780958113199 25.51051071133998 46 20.902695111348894 18.432020330368488 35.997859961211795 24.667424597070823 47 16.201074477808245 17.96562562696449 39.261998707059895 26.571301188167368 48 17.413896876880894 16.28186094206291 35.65268953833122 30.651552642724983 49 19.074522392385028 15.555540694175082 40.12242805234178 25.247508861098105 50 18.35756481419559 14.25947970306962 40.13277157315143 27.25018390958336 51 15.948683653224549 14.856149267705476 38.43126239996433 30.763904679105643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 352.0 1 2046.0 2 3740.0 3 65445.5 4 127151.0 5 73140.0 6 19129.0 7 18035.0 8 16941.0 9 17222.5 10 17504.0 11 17483.5 12 17463.0 13 16799.5 14 16136.0 15 15417.0 16 14698.0 17 13842.0 18 12986.0 19 12520.0 20 12054.0 21 11387.5 22 10721.0 23 11046.0 24 11371.0 25 11966.0 26 14007.0 27 15453.0 28 17182.0 29 18911.0 30 21046.0 31 23181.0 32 26107.0 33 29033.0 34 33518.5 35 38004.0 36 43174.0 37 48344.0 38 56485.0 39 64626.0 40 78026.0 41 91426.0 42 114838.5 43 138251.0 44 192523.5 45 246796.0 46 307862.0 47 368928.0 48 354976.5 49 341025.0 50 271275.5 51 201526.0 52 156503.0 53 111480.0 54 87619.0 55 63758.0 56 52291.5 57 40825.0 58 35472.0 59 30119.0 60 26343.0 61 22567.0 62 20901.5 63 19236.0 64 16876.0 65 14516.0 66 11833.5 67 9151.0 68 6890.0 69 4629.0 70 3704.5 71 2780.0 72 2494.5 73 2209.0 74 1886.5 75 1223.5 76 883.0 77 663.5 78 444.0 79 351.5 80 259.0 81 191.5 82 124.0 83 91.5 84 59.0 85 35.5 86 12.0 87 10.0 88 8.0 89 6.5 90 5.0 91 6.5 92 8.0 93 4.5 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2242950.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.7416010055545 #Duplication Level Percentage of deduplicated Percentage of total 1 71.15958380732121 23.298787007406276 2 13.081395113495287 8.56611638804146 3 5.253847534993642 5.160581392043335 4 2.673140628473712 3.5009161555689388 5 1.5436638861955783 2.5271013524249653 6 0.9858780236818796 1.9367534934922028 7 0.7355347738576726 1.6857810263951074 8 0.5476383026430465 1.4344443840398182 9 0.44189947091074455 1.302164654501271 >10 3.199133312854178 19.704553528089566 >50 0.19129049786487945 4.354559803851846 >100 0.16826829389741507 11.094160548077133 >500 0.012530133799912364 2.7822162760586906 >1k 0.004543894674693494 2.97828288414093 >5k 9.638564461471049E-4 2.107456808786472 >10k+ 6.88468890105075E-4 7.56612429708207 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 103387 4.609420629082236 No Hit CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 21933 0.9778639737845249 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 19626 0.8750083595265165 No Hit GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 12197 0.5437927729106757 No Hit CGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 10683 0.47629238279943825 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCC 9926 0.44254218774381954 No Hit CGTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 8059 0.35930359571100556 No Hit TCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 6766 0.3016563008537863 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTT 6161 0.27468289529414386 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCT 5633 0.25114246862391043 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTC 5120 0.22827080407499054 No Hit CGTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCT 5081 0.22653202255957555 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGC 4409 0.19657147952473306 No Hit GCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 4270 0.19037428386722843 No Hit ACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 4115 0.18346374194698947 No Hit TGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCTT 3729 0.16625426335852336 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCG 3529 0.15733743507434406 No Hit TCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 3426 0.15274526850799172 No Hit ACTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3403 0.15171983325531108 No Hit AGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 3260 0.14534430103212287 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGT 3005 0.13397534496979424 No Hit TGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 2711 0.12086760739205066 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.0294032412670813 0.0 2 0.0 0.0 0.0 2.996723065605564 0.0 3 0.0 0.0 0.0 4.820392786285918 0.0 4 0.0 0.0 0.0 6.013152321719165 0.0 5 0.0 0.0 0.0 10.839207293965536 0.0 6 0.0 0.0 0.0 12.304688022470406 0.0 7 0.0 0.0 0.0 16.58668271695758 0.0 8 0.0 0.0 0.0 21.545687598921063 0.0 9 0.0 0.0 0.0 25.446755389108095 0.0 10 0.0 0.0 0.0 27.874807730890122 0.0 11 0.0 0.0 0.0 30.493769366236428 0.0 12 0.0 0.0 0.0 32.385741991573596 0.0 13 0.0 0.0 0.0 33.233063599277735 0.0 14 0.0 0.0 0.0 33.80382977774806 0.0 15 0.0 0.0 0.0 35.318620566664436 0.0 16 4.4584141420896585E-5 0.0 0.0 37.19133284290778 0.0 17 4.4584141420896585E-5 0.0 0.0 39.427450455872844 0.0 18 4.4584141420896585E-5 0.0 0.0 40.76247798658017 0.0 19 4.4584141420896585E-5 0.0 0.0 42.12826857486792 0.0 20 4.4584141420896585E-5 0.0 0.0 43.498963418711966 0.0 21 4.4584141420896585E-5 0.0 0.0 44.84179317416795 0.0 22 2.2292070710448294E-4 0.0 0.0 46.11132660112798 0.0 23 2.675048485253795E-4 0.0 0.0 47.09752780935821 0.0 24 4.904255556298625E-4 0.0 0.0 47.90913751978421 0.0 25 4.904255556298625E-4 0.0 0.0 48.7121870750574 0.0 26 5.35009697050759E-4 0.0 0.0 49.49432666800419 0.0 27 5.795938384716556E-4 0.0 0.0 50.25319333912927 0.0 28 5.795938384716556E-4 0.0 0.0 51.03025033995408 0.0 29 5.795938384716556E-4 0.0 0.0 51.8935330702869 0.0 30 5.795938384716556E-4 0.0 0.0 52.65132972201788 0.0 31 5.795938384716556E-4 0.0 0.0 53.341982656768984 0.0 32 5.795938384716556E-4 0.0 0.0 53.99634410040348 0.0 33 5.795938384716556E-4 0.0 0.0 54.65017053434094 0.0 34 5.795938384716556E-4 0.0 0.0 55.33114871040371 0.0 35 5.795938384716556E-4 0.0 0.0 55.96486769656033 0.0 36 5.795938384716556E-4 0.0 0.0 56.65324684009898 0.0 37 5.795938384716556E-4 0.0 0.0 57.285672886154394 0.0 38 5.795938384716556E-4 0.0 0.0 57.957511313225886 0.0 39 5.795938384716556E-4 0.0 0.0 58.588421498473 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGACG 25 3.891997E-5 45.0 16 TCCGCTA 20 7.034725E-4 45.0 41 ACGTTGC 20 7.034725E-4 45.0 19 TTGTACG 20 7.034725E-4 45.0 28 ATATCCG 20 7.034725E-4 45.0 31 ACCTACG 20 7.034725E-4 45.0 10 GCTTCGC 20 7.034725E-4 45.0 30 TTCGACG 60 0.0 44.999996 24 CGTTTTT 28605 0.0 44.614574 1 CTAGCGG 380 0.0 44.407894 1 CTAACGG 145 0.0 43.44828 1 CCAACGG 135 0.0 43.333332 1 TTACCGG 130 0.0 43.269234 1 TTTACGG 210 0.0 42.857147 1 TATACGG 205 0.0 42.80488 1 TACGCGG 270 0.0 42.5 1 ACGGCCA 75 0.0 42.0 6 ACCGAAC 70 0.0 41.785713 10 TAAGCGG 345 0.0 41.739132 1 AACGCGG 135 0.0 41.666664 1 >>END_MODULE