##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1043320_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 844963 Sequences flagged as poor quality 0 Sequence length 52 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19080835492205 33.0 31.0 34.0 30.0 34.0 2 32.50929093936658 34.0 31.0 34.0 31.0 34.0 3 32.56866750378419 34.0 31.0 34.0 31.0 34.0 4 36.102670767832436 37.0 35.0 37.0 35.0 37.0 5 35.986046726306355 37.0 35.0 37.0 35.0 37.0 6 36.259614918049664 37.0 36.0 37.0 35.0 37.0 7 36.17316024488646 37.0 37.0 37.0 35.0 37.0 8 36.15487068664545 37.0 37.0 37.0 35.0 37.0 9 37.739230001787064 39.0 38.0 39.0 35.0 39.0 10 37.55908601915113 39.0 37.0 39.0 35.0 39.0 11 37.20260177072842 39.0 37.0 39.0 34.0 39.0 12 37.164652180036285 39.0 37.0 39.0 34.0 39.0 13 37.1705613145191 39.0 37.0 39.0 34.0 39.0 14 38.559774806707516 40.0 38.0 41.0 34.0 41.0 15 38.67309574502079 40.0 38.0 41.0 35.0 41.0 16 38.69908268172689 40.0 38.0 41.0 35.0 41.0 17 38.70240235371253 40.0 38.0 41.0 35.0 41.0 18 38.41455661372155 40.0 37.0 41.0 35.0 41.0 19 38.15084329136305 40.0 37.0 41.0 34.0 41.0 20 37.82533318026943 40.0 35.0 41.0 34.0 41.0 21 37.76277067753263 39.0 35.0 41.0 34.0 41.0 22 37.722751173720035 39.0 35.0 41.0 34.0 41.0 23 37.73238118118782 39.0 35.0 41.0 34.0 41.0 24 37.63775573604998 39.0 35.0 41.0 34.0 41.0 25 37.55428462548064 39.0 35.0 41.0 34.0 41.0 26 37.50756897047563 39.0 35.0 41.0 34.0 41.0 27 37.54179532121525 39.0 35.0 41.0 34.0 41.0 28 37.523800450433924 39.0 35.0 41.0 34.0 41.0 29 37.50620323020061 39.0 35.0 41.0 34.0 41.0 30 37.36265729978709 39.0 35.0 41.0 33.0 41.0 31 37.293701617703974 39.0 35.0 41.0 33.0 41.0 32 37.10836450826841 39.0 35.0 41.0 33.0 41.0 33 36.91014872840586 39.0 35.0 41.0 33.0 41.0 34 36.75336553198187 39.0 35.0 41.0 32.0 41.0 35 36.66389770913046 40.0 35.0 41.0 32.0 41.0 36 36.63470826533233 40.0 35.0 41.0 32.0 41.0 37 36.61041844435792 39.0 35.0 41.0 32.0 41.0 38 36.59582727291018 39.0 35.0 41.0 32.0 41.0 39 36.58556883555848 40.0 35.0 41.0 31.0 41.0 40 36.50927555407752 39.0 35.0 41.0 31.0 41.0 41 36.49706555198275 39.0 35.0 41.0 31.0 41.0 42 36.39175206488331 39.0 35.0 41.0 31.0 41.0 43 36.26772769931938 39.0 35.0 41.0 31.0 41.0 44 36.120528354495995 39.0 35.0 41.0 31.0 41.0 45 36.027998859121645 39.0 35.0 41.0 30.0 41.0 46 36.008799201858544 39.0 35.0 41.0 30.0 41.0 47 35.890855575924625 38.0 35.0 41.0 30.0 41.0 48 35.87605137739759 38.0 35.0 41.0 30.0 41.0 49 35.83758578778006 38.0 35.0 41.0 30.0 41.0 50 35.67802022100376 38.0 35.0 40.0 29.0 41.0 51 35.597900736481954 38.0 35.0 40.0 29.0 41.0 52 35.252312823165035 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 4.0 15 7.0 16 24.0 17 57.0 18 134.0 19 253.0 20 539.0 21 826.0 22 1411.0 23 2345.0 24 4335.0 25 7478.0 26 10257.0 27 11096.0 28 10747.0 29 10877.0 30 12667.0 31 15301.0 32 19171.0 33 25514.0 34 45207.0 35 92043.0 36 88983.0 37 63156.0 38 101871.0 39 319510.0 40 1149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.27618014043219 19.294454313384136 25.32347570248638 29.105889843697298 2 33.65058588364224 18.977635707125636 26.84176703595305 20.530011373279066 3 20.553562700378595 21.450525052576268 39.095794727106394 18.900117519938743 4 22.890351411836967 23.528367514317196 36.446921344484906 17.13435972936093 5 19.695181919208295 28.496514048544135 31.703991772420803 20.104312259826763 6 69.5164166951689 1.5710747097801916 24.047325149148545 4.865183445902365 7 70.24520600310309 1.55213896939866 19.206876514119553 8.995778513378692 8 55.84445709457101 3.0455771436145724 29.68200974480539 11.427956017009029 9 32.68249615663644 17.15944958536646 30.859339403027114 19.29871485496998 10 26.363639591319384 17.279218143279646 44.660653780106344 11.696488485294623 11 22.498854979448804 15.418426605662022 40.758589429359624 21.324128985529544 12 15.843889022359559 21.272884138122024 45.053688741400514 17.829538098117904 13 10.976693654041657 24.732562254205213 44.66586110871127 19.62488298304186 14 9.214249618030612 22.687857338131963 47.547407401270824 20.5504856425666 15 9.383724494445318 17.991912071889537 52.086896112610845 20.537467321054294 16 9.252831189057982 25.59165312563982 39.931689316573625 25.22382636872857 17 11.914486196437004 22.7151958133078 42.6159488640331 22.754369126222095 18 14.003335057274697 29.6635473979334 40.801431541972846 15.53168600281906 19 14.188786964636321 23.478661195815675 36.53781289831626 25.79473894123175 20 11.122143809847296 31.48623075803319 35.99956447797123 21.39206095414829 21 13.205193600193144 24.3698244775215 36.75569226108125 25.669289661204097 22 10.423770034900937 27.676359793269057 31.573335163788236 30.326535008041773 23 10.06481940629353 23.912407998930128 44.23779502771127 21.784977567065066 24 16.493503265823474 20.820911684890344 39.86482248335134 22.820762565934842 25 11.774953459500594 26.503172328255793 38.06438861819985 23.657485594043763 26 15.598671184418725 22.781352556265777 36.41047004425046 25.209506215065037 27 21.930664419625476 24.089338823120066 37.85751565453162 16.12248110272284 28 13.698114591999886 24.222599096055095 35.47220410834557 26.607082203599447 29 21.5844954157756 22.75365903595779 33.64466846477301 22.017177083493596 30 20.423852878765107 27.94027667483665 30.682763623969333 20.95310682242891 31 22.27150774649304 20.8772455125254 36.285020764222814 20.566225976758744 32 21.123883530994846 24.306863140752906 35.37551348402238 19.193739844229864 33 16.626053448494194 28.184784422513175 35.31953470151947 19.869627427473155 34 14.60111271144417 19.620030699569092 46.18415244217794 19.594704146808795 35 22.680164693601967 22.215410615612754 39.17994042342682 15.924484267358451 36 15.212973822522407 24.87256838465116 38.616365450321496 21.298092342504937 37 17.97486990554616 23.467773145096295 43.18887335895181 15.368483590405734 38 18.394888296884005 19.84465591984501 36.348100449368786 25.41235533390219 39 24.813275847581494 17.770008864293466 35.55682319817554 21.8598920899495 40 16.156447087032213 16.92630328191885 41.17564911126286 25.741600519786072 41 21.39868846328182 20.933579340160456 32.26271446205337 25.405017734504355 42 20.435924413258334 16.094787582414853 39.6442211079065 23.825066896420317 43 22.97485215328955 20.22928814634487 36.935345097951036 19.860514602414543 44 14.886450649318373 23.99501516634456 38.572576550689206 22.545957633647866 45 19.640741665611394 20.761619147820674 37.00528898898532 22.59235019758262 46 25.166545754074438 16.407345647087507 36.20679248677161 22.219316112066444 47 17.370583090620535 15.719149832596221 40.726635367465796 26.18363170931745 48 17.88610862250773 13.784863952622779 34.660689284619565 33.66833814024993 49 20.783750294391588 14.134820104548956 41.742182793802804 23.33924680725665 50 18.531343976008415 14.045822124755759 41.20121236077793 26.221621538457896 51 15.735600257052676 13.204128464796682 39.43888667314427 31.621384605006376 52 14.673186873271375 12.798785272254525 50.22208073016215 22.305947124311952 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 416.0 1 1643.0 2 2870.0 3 32870.0 4 62870.0 5 33887.0 6 4904.0 7 4758.5 8 4613.0 9 5041.5 10 5470.0 11 5770.5 12 6071.0 13 5839.0 14 5313.0 15 5019.0 16 4512.0 17 4005.0 18 3706.5 19 3408.0 20 3244.5 21 3081.0 22 2787.5 23 2494.0 24 2569.0 25 2644.0 26 2674.5 27 2705.0 28 2705.0 29 2705.0 30 3333.0 31 3961.0 32 4523.0 33 5085.0 34 5910.0 35 6735.0 36 7934.5 37 9134.0 38 10995.5 39 16930.0 40 21003.0 41 33023.0 42 45043.0 43 67341.0 44 89639.0 45 118794.5 46 147950.0 47 149722.5 48 151495.0 49 125314.0 50 99133.0 51 76608.5 52 54084.0 53 40487.5 54 26891.0 55 21538.5 56 16186.0 57 13855.0 58 11524.0 59 9948.5 60 8373.0 61 6857.5 62 5342.0 63 4559.0 64 3102.5 65 2429.0 66 1906.5 67 1384.0 68 1277.0 69 1170.0 70 980.0 71 790.0 72 897.0 73 1004.0 74 728.0 75 452.0 76 358.5 77 265.0 78 270.0 79 275.0 80 171.5 81 68.0 82 43.0 83 18.0 84 13.5 85 9.0 86 6.0 87 3.0 88 3.0 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 844963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.758868514793505 #Duplication Level Percentage of deduplicated Percentage of total 1 71.43306896641029 19.114681000803493 2 11.870736818510458 6.352949714004791 3 5.032732806958736 4.040107063544894 4 2.739449971640493 2.9321832637593097 5 1.7085638927833788 2.285961827805709 6 1.1351330966531645 1.8224926368079448 7 0.7508308261700203 1.4063968348036144 8 0.5605293825983003 1.1999305638101039 9 0.4407087216555566 1.061358006249339 >10 3.4711853165780293 20.25411881554878 >50 0.5591065247395032 10.100909058224687 >100 0.2744543526964083 13.675901911720215 >500 0.014631653697869907 2.7014141880483535 >1k 0.007094135126239955 3.403314418031842 >5k 0.0013301503361699916 2.6536004976015404 >10k+ 4.433834453899972E-4 6.994680199235394 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 58955 6.977228588707435 No Hit CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 8827 1.044661127173616 Illumina Single End Adapter 2 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCTT 8008 0.9477338060956516 Illumina Single End Adapter 2 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 5531 0.6545848753140671 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 3380 0.4000175155598529 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 3093 0.3660515312504808 Illumina Single End Adapter 2 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCG 2760 0.32664152158141835 No Hit ACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 2458 0.29090031161127766 Illumina Single End Adapter 2 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1999 0.23657840639175917 Illumina Single End Adapter 2 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1864 0.22060137544484196 Illumina Single End Adapter 2 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 1666 0.19716839672269676 No Hit ACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 1639 0.1939729905333133 Illumina Single End Adapter 2 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1588 0.18793722328670012 Illumina Single End Adapter 2 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1395 0.16509598645147774 Illumina Single End Adapter 2 (95% over 21bp) TGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCTTG 1225 0.14497676229610054 Illumina Single End Adapter 2 (95% over 24bp) GGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1193 0.14118961421979423 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCT 1115 0.13195844078379762 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCC 1114 0.13184009240641306 No Hit ATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 1108 0.13113000214210563 Illumina Single End Adapter 2 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 1088 0.12876303459441418 No Hit CGGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 956 0.1131410487796507 No Hit GTACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 943 0.11160251987365127 No Hit ATAGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 928 0.10982729421288269 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTT 923 0.10923555232595983 No Hit ATGCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 906 0.1072236299104221 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 902 0.10675023640088381 No Hit ATTGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 890 0.10533005587226897 No Hit GTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 883 0.10450161723057697 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGT 882 0.10438326885319239 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9731787072333344 0.0 2 0.0 0.0 0.0 3.2832206854027928 0.0 3 0.0 0.0 0.0 5.444972146709382 0.0 4 0.0 0.0 0.0 6.777929921191816 0.0 5 0.0 0.0 0.0 13.406385841746916 0.0 6 0.0 0.0 0.0 15.016515516064016 0.0 7 0.0 0.0 0.0 20.373081424867124 0.0 8 0.0 0.0 0.0 27.096926137594192 0.0 9 0.0 0.0 0.0 31.81748786633261 0.0 10 0.0 0.0 0.0 34.640570060464185 0.0 11 0.0 0.0 0.0 37.24376096941523 0.0 12 0.0 0.0 0.0 39.11804422205469 0.0 13 0.0 0.0 0.0 39.824228989908434 0.0 14 0.0 0.0 0.0 40.314901362544866 0.0 15 0.0 0.0 0.0 41.97982633559103 0.0 16 0.0 0.0 0.0 43.85091418204111 0.0 17 0.0 0.0 0.0 46.10805443551966 0.0 18 0.0 0.0 0.0 47.11164867574083 0.0 19 0.0 0.0 0.0 48.284836140754095 0.0 20 1.1834837738457187E-4 0.0 0.0 49.458141954144736 0.0 21 1.1834837738457187E-4 0.0 0.0 50.466825174593446 0.0 22 5.917418869228594E-4 0.0 0.0 51.53941651882982 0.0 23 7.100902643074312E-4 0.0 0.0 52.31980571930369 0.0 24 0.006390812378766881 0.0 0.0 52.938175991138074 0.0 25 0.006509160756151453 0.0 0.0 53.516189466284324 0.0 26 0.006509160756151453 0.0 0.0 54.08331489071119 0.0 27 0.006509160756151453 0.0 0.0 54.59469822938993 0.0 28 0.006509160756151453 0.0 0.0 55.128212714639574 0.0 29 0.006509160756151453 0.0 0.0 55.77818200323564 0.0 30 0.006509160756151453 0.0 0.0 56.37347434148004 0.0 31 0.006509160756151453 0.0 0.0 56.870892571627394 0.0 32 0.006509160756151453 0.0 0.0 57.354108996488605 0.0 33 0.006509160756151453 0.0 0.0 57.79779706330336 0.0 34 0.006509160756151453 0.0 0.0 58.35344269512393 0.0 35 0.006509160756151453 0.0 0.0 58.77961520208577 0.0 36 0.006627509133536024 0.0 0.0 59.191585903761464 0.0 37 0.006627509133536024 0.0 0.0 59.62083546853531 0.0 38 0.006627509133536024 0.0 0.0 60.036474969909925 0.0 39 0.007100902643074312 0.0 0.0 60.44832732320823 0.0 40 0.007100902643074312 0.0 0.0 60.872606256131924 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACAC 35 1.0191434E-7 46.000004 7 AATCAGG 35 1.0191434E-7 46.000004 1 GCAACGG 35 1.0191434E-7 46.000004 1 ACGGGTA 35 1.0191434E-7 46.000004 4 GAGACGG 35 1.0191434E-7 46.000004 1 CACTAGG 35 1.0191434E-7 46.000004 1 GGCCTAT 35 1.0191434E-7 46.000004 7 TTGGGCG 70 0.0 46.000004 4 TGGTAGT 35 1.0191434E-7 46.000004 45 GGCTAAC 35 1.0191434E-7 46.000004 8 TGATCGG 25 3.4163826E-5 46.0 1 TCACGGC 25 3.4163826E-5 46.0 2 TCACGAC 60 0.0 46.0 24 CTTAATA 20 6.3105015E-4 46.0 12 ATTTACT 45 3.092282E-10 46.0 14 GTCATCC 20 6.3105015E-4 46.0 16 TGTCAGA 20 6.3105015E-4 46.0 43 AGCGTGT 20 6.3105015E-4 46.0 24 CCTTAGC 25 3.4163826E-5 46.0 42 ATCTCGG 55 1.8189894E-12 46.0 1 >>END_MODULE